RNA–Protein interactions for RNA: ENST00000637855.1

ARHGEF9-236, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 5

Gene ARHGEF9, Length 2,455 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-236ENST00000637855 RBM10P98175 930 aaKnown RBP11.53□□□□□ -0.56
ARHGEF9-236ENST00000637855 MAGI2Q86UL8 1455 aa11.53□□□□□ -0.56
ARHGEF9-236ENST00000637855 MBD5Q9P267 1494 aa11.52□□□□□ -0.56
ARHGEF9-236ENST00000637855 NCOA1Q15788 1441 aa11.52□□□□□ -0.57
ARHGEF9-236ENST00000637855 ZMYM4Q5VZL5 1548 aa11.52□□□□□ -0.57
ARHGEF9-236ENST00000637855 TSPOAP1O95153 1857 aa11.51□□□□□ -0.57
ARHGEF9-236ENST00000637855 NAP1L5Q96NT1 182 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF9-236ENST00000637855 CDC42BPBQ9Y5S2 1711 aa11.51□□□□□ -0.57
ARHGEF9-236ENST00000637855 ITGAEP38570 1179 aa11.51□□□□□ -0.57
ARHGEF9-236ENST00000637855 ANKRD30AQ9BXX3 1397 aa11.51□□□□□ -0.57
ARHGEF9-236ENST00000637855 ARID3CA6NKF2 412 aa11.5□□□□□ -0.57
ARHGEF9-236ENST00000637855 CCDC141Q6ZP82 1450 aa11.5□□□□□ -0.57
ARHGEF9-236ENST00000637855 SAMD9LQ8IVG5 1584 aa11.5□□□□□ -0.57
ARHGEF9-236ENST00000637855 TTC37Q6PGP7 1564 aa11.5□□□□□ -0.57
ARHGEF9-236ENST00000637855 KDM5DQ9BY66 1539 aa11.5□□□□□ -0.57
ARHGEF9-236ENST00000637855 PAXIP1Q6ZW49 1069 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF9-236ENST00000637855 PLXNC1O60486 1568 aa11.48□□□□□ -0.57
ARHGEF9-236ENST00000637855 EFCAB2Q5VUJ9 269 aa11.48□□□□□ -0.57
ARHGEF9-236ENST00000637855 FANCAO15360 1455 aa11.48□□□□□ -0.57
ARHGEF9-236ENST00000637855 DENND4BO75064 1496 aaPredicted RBP11.48□□□□□ -0.57
ARHGEF9-236ENST00000637855 C9orf84Q5VXU9 1444 aa11.47□□□□□ -0.57
ARHGEF9-236ENST00000637855 KCNH8Q96L42 1107 aa11.46□□□□□ -0.57
ARHGEF9-236ENST00000637855 ABCC1P33527 1531 aa11.45□□□□□ -0.58
ARHGEF9-236ENST00000637855 REREQ9P2R6 1566 aa11.45□□□□□ -0.58
ARHGEF9-236ENST00000637855 RICTORQ6R327 1708 aa11.45□□□□□ -0.58
ARHGEF9-236ENST00000637855 ARHGAP5Q13017 1502 aa11.45□□□□□ -0.58
ARHGEF9-236ENST00000637855 RTEL1-TNFRSF6BF6WH68 1400 aa11.44□□□□□ -0.58
ARHGEF9-236ENST00000637855 ZMYND15Q9H091 742 aa11.44□□□□□ -0.58
ARHGEF9-236ENST00000637855 ZNF644Q9H582 1327 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF9-236ENST00000637855 KDM5CP41229 1560 aa11.43□□□□□ -0.58
ARHGEF9-236ENST00000637855 DEKP35659 375 aaKnown RBP11.43□□□□□ -0.58
ARHGEF9-236ENST00000637855 FRMPD1Q5SYB0 1578 aa11.42□□□□□ -0.58
ARHGEF9-236ENST00000637855 ARHGEF40Q8TER5 1519 aa11.42□□□□□ -0.58
ARHGEF9-236ENST00000637855 ZNF518AQ6AHZ1 1483 aa11.42□□□□□ -0.58
ARHGEF9-236ENST00000637855 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
ARHGEF9-236ENST00000637855 ANKRD50Q9ULJ7 1429 aa11.42□□□□□ -0.58
ARHGEF9-236ENST00000637855 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
ARHGEF9-236ENST00000637855 TSPY4P0CV99 314 aa11.42□□□□□ -0.58
ARHGEF9-236ENST00000637855 TSPY10P0CW01 314 aa11.42□□□□□ -0.58
ARHGEF9-236ENST00000637855 ADGRL1O94910 1474 aa11.41□□□□□ -0.58
ARHGEF9-236ENST00000637855 IGSF3O75054 1194 aa11.41□□□□□ -0.58
ARHGEF9-236ENST00000637855 DIEXFQ68CQ4 756 aaKnown RBP11.41□□□□□ -0.58
ARHGEF9-236ENST00000637855 COL17A1Q9UMD9 1497 aaPredicted RBP11.41□□□□□ -0.58
ARHGEF9-236ENST00000637855 SYCP2Q9BX26 1530 aa11.4□□□□□ -0.58
ARHGEF9-236ENST00000637855 MLH3Q9UHC1 1453 aa11.4□□□□□ -0.58
ARHGEF9-236ENST00000637855 RRP7BPQ9NSQ0 103 aa11.4□□□□□ -0.58
ARHGEF9-236ENST00000637855 PZPP20742 1482 aa11.4□□□□□ -0.58
ARHGEF9-236ENST00000637855 UNC13BO14795 1591 aa11.4□□□□□ -0.58
ARHGEF9-236ENST00000637855 DUOX2Q9NRD8 1548 aa11.4□□□□□ -0.59
ARHGEF9-236ENST00000637855 ERBINQ96RT1 1412 aa11.39□□□□□ -0.59
ARHGEF9-236ENST00000637855 ZFYVE16Q7Z3T8 1539 aa11.38□□□□□ -0.59
ARHGEF9-236ENST00000637855 MPHOSPH9Q99550 1183 aa11.38□□□□□ -0.59
ARHGEF9-236ENST00000637855 ANKRD30BQ9BXX2 1392 aa11.38□□□□□ -0.59
ARHGEF9-236ENST00000637855 KIF15Q9NS87 1388 aa11.38□□□□□ -0.59
ARHGEF9-236ENST00000637855 FAM135AQ9P2D6 1515 aa11.37□□□□□ -0.59
ARHGEF9-236ENST00000637855 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.37□□□□□ -0.59
ARHGEF9-236ENST00000637855 SCAPERQ9BY12 1400 aa11.37□□□□□ -0.59
ARHGEF9-236ENST00000637855 AGLP35573 1532 aa11.37□□□□□ -0.59
ARHGEF9-236ENST00000637855 CHIC2Q9UKJ5 165 aa11.37□□□□□ -0.59
ARHGEF9-236ENST00000637855 ARHGEF12Q9NZN5 1544 aa11.37□□□□□ -0.59
ARHGEF9-236ENST00000637855 RPRD2Q5VT52 1461 aaKnown RBP11.36□□□□□ -0.59
ARHGEF9-236ENST00000637855 HECW2Q9P2P5 1572 aa11.36□□□□□ -0.59
ARHGEF9-236ENST00000637855 VSIG10Q8N0Z9 540 aa11.35□□□□□ -0.59
ARHGEF9-236ENST00000637855 POLR3GLQ9BT43 218 aa11.35□□□□□ -0.59
ARHGEF9-236ENST00000637855 ZNF777Q9ULD5 760 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF9-236ENST00000637855 PPP6R1Q9UPN7 881 aa11.35□□□□□ -0.59
ARHGEF9-236ENST00000637855 CCDC9Q9Y3X0 531 aaKnown RBP11.35□□□□□ -0.59
ARHGEF9-236ENST00000637855 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF9-236ENST00000637855 PUS7Q96PZ0 661 aaKnown RBP11.35□□□□□ -0.59
ARHGEF9-236ENST00000637855 INO80Q9ULG1 1556 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF9-236ENST00000637855 ATP10AO60312 1499 aa11.35□□□□□ -0.59
ARHGEF9-236ENST00000637855 TONSLQ96HA7 1378 aa11.34□□□□□ -0.59
ARHGEF9-236ENST00000637855 EIF2AK4Q9P2K8 1649 aaKnown RBP11.33□□□□□ -0.6
ARHGEF9-236ENST00000637855 IQGAP3Q86VI3 1631 aa11.33□□□□□ -0.6
ARHGEF9-236ENST00000637855 HNRNPMP52272 730 aaKnown RBP eCLIP11.33□□□□□ -0.6
ARHGEF9-236ENST00000637855 ADAMTSL3P82987 1691 aa11.31□□□□□ -0.6
ARHGEF9-236ENST00000637855 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
ARHGEF9-236ENST00000637855 YTHDC1Q96MU7 727 aaKnown RBP11.31□□□□□ -0.6
ARHGEF9-236ENST00000637855 BCORL1Q5H9F3 1711 aa11.31□□□□□ -0.6
ARHGEF9-236ENST00000637855 DEPDC5O75140 1603 aa11.3□□□□□ -0.6
ARHGEF9-236ENST00000637855 TRAPPC8Q9Y2L5 1435 aa11.3□□□□□ -0.6
ARHGEF9-236ENST00000637855 SIN3AQ96ST3 1273 aa11.29□□□□□ -0.6
ARHGEF9-236ENST00000637855 DIP2CQ9Y2E4 1556 aa11.29□□□□□ -0.6
ARHGEF9-236ENST00000637855 ATP7AQ04656 1500 aa11.29□□□□□ -0.6
ARHGEF9-236ENST00000637855 SLC4A1APQ9BWU0 796 aaKnown RBP11.29□□□□□ -0.6
ARHGEF9-236ENST00000637855 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF9-236ENST00000637855 VWDEQ8N2E2 1590 aa11.28□□□□□ -0.6
ARHGEF9-236ENST00000637855 TICAM2Q86XR7 235 aa11.28□□□□□ -0.6
ARHGEF9-236ENST00000637855 NUP155O75694 1391 aa11.27□□□□□ -0.6
ARHGEF9-236ENST00000637855 NAP1L2Q9ULW6 460 aaPredicted RBP11.27□□□□□ -0.61
ARHGEF9-236ENST00000637855 NEURL4Q96JN8 1562 aa11.27□□□□□ -0.61
ARHGEF9-236ENST00000637855 KIDINS220Q9ULH0 1771 aa11.27□□□□□ -0.61
ARHGEF9-236ENST00000637855 CNTLNQ9NXG0 1405 aa11.27□□□□□ -0.61
ARHGEF9-236ENST00000637855 SPAG9O60271 1321 aaKnown RBP11.26□□□□□ -0.61
ARHGEF9-236ENST00000637855 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
ARHGEF9-236ENST00000637855 UHRF1BP1Q6BDS2 1440 aa11.26□□□□□ -0.61
ARHGEF9-236ENST00000637855 IRX6P78412 446 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF9-236ENST00000637855 ABCA6Q8N139 1617 aa11.25□□□□□ -0.61
ARHGEF9-236ENST00000637855 MROH2AA6NES4 1674 aa11.25□□□□□ -0.61
ARHGEF9-236ENST00000637855 RAPGEF3O95398 923 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms