RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 FOXD1Q16676 465 aa8.98□□□□□ -0.97
CACNA1D-227ENST00000637844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.98□□□□□ -0.97
CACNA1D-227ENST00000637844 KIDINS220Q9ULH0 1771 aa8.98□□□□□ -0.97
CACNA1D-227ENST00000637844 MLH3Q9UHC1 1453 aa8.96□□□□□ -0.97
CACNA1D-227ENST00000637844 RICTORQ6R327 1708 aa8.96□□□□□ -0.98
CACNA1D-227ENST00000637844 DHX29Q7Z478 1369 aaKnown RBP8.96□□□□□ -0.98
CACNA1D-227ENST00000637844 A2MP01023 1474 aa8.96□□□□□ -0.98
CACNA1D-227ENST00000637844 TET3O43151 1660 aa8.95□□□□□ -0.98
CACNA1D-227ENST00000637844 FAM69CQ0P6D2 419 aa8.95□□□□□ -0.98
CACNA1D-227ENST00000637844 CCDC144AA2RUR9 1427 aa8.95□□□□□ -0.98
CACNA1D-227ENST00000637844 TSPOAP1O95153 1857 aa8.94□□□□□ -0.98
CACNA1D-227ENST00000637844 PRDM15P57071 1507 aaPredicted RBP8.94□□□□□ -0.98
CACNA1D-227ENST00000637844 RNF17Q9BXT8 1623 aaKnown RBP8.94□□□□□ -0.98
CACNA1D-227ENST00000637844 BCORL1Q5H9F3 1711 aa8.94□□□□□ -0.98
CACNA1D-227ENST00000637844 L3MBTL2Q969R5 705 aa8.93□□□□□ -0.98
CACNA1D-227ENST00000637844 ABCA6Q8N139 1617 aa8.93□□□□□ -0.98
CACNA1D-227ENST00000637844 SPHKAPQ2M3C7 1700 aa8.93□□□□□ -0.98
CACNA1D-227ENST00000637844 KIF13AQ9H1H9 1805 aa8.92□□□□□ -0.98
CACNA1D-227ENST00000637844 E9PCH4 1651 aa8.92□□□□□ -0.98
CACNA1D-227ENST00000637844 KIF3BO15066 747 aa8.92□□□□□ -0.98
CACNA1D-227ENST00000637844 PPRC1Q5VV67 1664 aaKnown RBP8.91□□□□□ -0.98
CACNA1D-227ENST00000637844 VWDEQ8N2E2 1590 aa8.91□□□□□ -0.98
CACNA1D-227ENST00000637844 ZMYM4Q5VZL5 1548 aa8.91□□□□□ -0.98
CACNA1D-227ENST00000637844 ATP10AO60312 1499 aa8.91□□□□□ -0.98
CACNA1D-227ENST00000637844 DIP2CQ9Y2E4 1556 aa8.9□□□□□ -0.98
CACNA1D-227ENST00000637844 CEP152O94986 1710 aa8.9□□□□□ -0.98
CACNA1D-227ENST00000637844 ZC3H13Q5T200 1668 aaKnown RBP8.9□□□□□ -0.98
CACNA1D-227ENST00000637844 MROH1Q8NDA8 1641 aa8.9□□□□□ -0.99
CACNA1D-227ENST00000637844 TRPM2O94759 1503 aa8.9□□□□□ -0.99
CACNA1D-227ENST00000637844 EIF4G2P78344 907 aaKnown RBP eCLIP8.89□□□□□ -0.99
CACNA1D-227ENST00000637844 FRMPD1Q5SYB0 1578 aa8.89□□□□□ -0.99
CACNA1D-227ENST00000637844 EFCAB6Q5THR3 1501 aa8.89□□□□□ -0.99
CACNA1D-227ENST00000637844 LMTK2Q8IWU2 1503 aa8.89□□□□□ -0.99
CACNA1D-227ENST00000637844 RAPGEF3O95398 923 aa8.88□□□□□ -0.99
CACNA1D-227ENST00000637844 UHRF1BP1Q6BDS2 1440 aa8.87□□□□□ -0.99
CACNA1D-227ENST00000637844 KIF1BO60333 1816 aa8.87□□□□□ -0.99
CACNA1D-227ENST00000637844 REREQ9P2R6 1566 aa8.86□□□□□ -0.99
CACNA1D-227ENST00000637844 ZNF326Q5BKZ1 582 aaKnown RBP8.86□□□□□ -0.99
CACNA1D-227ENST00000637844 CAMSAP1Q5T5Y3 1602 aa8.86□□□□□ -0.99
CACNA1D-227ENST00000637844 POLR1AO95602 1720 aaPredicted RBP8.85□□□□□ -0.99
CACNA1D-227ENST00000637844 PLA2R1Q13018 1463 aa8.85□□□□□ -0.99
CACNA1D-227ENST00000637844 RALGAPBQ86X10 1494 aa8.85□□□□□ -0.99
CACNA1D-227ENST00000637844 DCAF11Q8TEB1 546 aa8.85□□□□□ -0.99
CACNA1D-227ENST00000637844 PTPRTO14522 1441 aa8.85□□□□□ -0.99
CACNA1D-227ENST00000637844 NEURL4Q96JN8 1562 aa8.85□□□□□ -0.99
CACNA1D-227ENST00000637844 WASHC2CQ9Y4E1 1318 aa8.84□□□□□ -0.99
CACNA1D-227ENST00000637844 CLTCL1P53675 1640 aa8.84□□□□□ -0.99
CACNA1D-227ENST00000637844 GGT6Q6P531 493 aa8.84□□□□□ -0.99
CACNA1D-227ENST00000637844 KDM2AQ9Y2K7 1162 aa8.84□□□□□ -0.99
CACNA1D-227ENST00000637844 ABCC3O15438 1527 aa8.84□□□□□ -0.99
CACNA1D-227ENST00000637844 TRPM1Q7Z4N2 1603 aa8.83□□□□□ -1
CACNA1D-227ENST00000637844 HSPA5P11021 654 aaKnown RBP8.83□□□□□ -1
CACNA1D-227ENST00000637844 NBPF8Q3BBV2 869 aa8.83□□□□□ -1
CACNA1D-227ENST00000637844 STAC3Q96MF2 364 aa8.83□□□□□ -1
CACNA1D-227ENST00000637844 ARHGEF40Q8TER5 1519 aa8.83□□□□□ -1
CACNA1D-227ENST00000637844 YEATS2Q9ULM3 1422 aa8.82□□□□□ -1
CACNA1D-227ENST00000637844 AGLP35573 1532 aa8.82□□□□□ -1
CACNA1D-227ENST00000637844 RGL3Q3MIN7 710 aa8.82□□□□□ -1
CACNA1D-227ENST00000637844 LAMC1P11047 1609 aa8.82□□□□□ -1
CACNA1D-227ENST00000637844 PRAG1Q86YV5 1406 aa8.81□□□□□ -1
CACNA1D-227ENST00000637844 CNTLNQ9NXG0 1405 aa8.81□□□□□ -1
CACNA1D-227ENST00000637844 HIRIP3Q9BW71 556 aaPredicted RBP8.81□□□□□ -1
CACNA1D-227ENST00000637844 ROCK2O75116 1388 aaKnown RBP8.81□□□□□ -1
CACNA1D-227ENST00000637844 SPATA31E1Q6ZUB1 1445 aa8.8□□□□□ -1
CACNA1D-227ENST00000637844 DDX10Q13206 875 aaKnown RBP8.8□□□□□ -1
CACNA1D-227ENST00000637844 MIER1Q8N108 512 aa8.8□□□□□ -1
CACNA1D-227ENST00000637844 CARD11Q9BXL7 1154 aa8.8□□□□□ -1
CACNA1D-227ENST00000637844 USP47Q96K76 1375 aa8.8□□□□□ -1
CACNA1D-227ENST00000637844 PPP6R1Q9UPN7 881 aa8.79□□□□□ -1
CACNA1D-227ENST00000637844 IFT172Q9UG01 1749 aa8.79□□□□□ -1
CACNA1D-227ENST00000637844 KIAA1210Q9ULL0 1709 aa8.79□□□□□ -1
CACNA1D-227ENST00000637844 MADDQ8WXG6 1647 aa8.79□□□□□ -1
CACNA1D-227ENST00000637844 NPATQ14207 1427 aa8.79□□□□□ -1
CACNA1D-227ENST00000637844 ARHGAP31Q2M1Z3 1444 aa8.79□□□□□ -1
CACNA1D-227ENST00000637844 MROH2AA6NES4 1674 aa8.78□□□□□ -1
CACNA1D-227ENST00000637844 CLTCQ00610 1675 aaKnown RBP8.78□□□□□ -1
CACNA1D-227ENST00000637844 PREX1Q8TCU6 1659 aa8.78□□□□□ -1
CACNA1D-227ENST00000637844 ADGRB3O60242 1522 aa8.77□□□□□ -1.01
CACNA1D-227ENST00000637844 ANP32CO43423 234 aa8.77□□□□□ -1.01
CACNA1D-227ENST00000637844 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1.01
CACNA1D-227ENST00000637844 UGGT1Q9NYU2 1555 aa8.77□□□□□ -1.01
CACNA1D-227ENST00000637844 ARID4BQ4LE39 1312 aaPredicted RBP8.77□□□□□ -1.01
CACNA1D-227ENST00000637844 MYOM2P54296 1465 aa8.77□□□□□ -1.01
CACNA1D-227ENST00000637844 PIK3C2BO00750 1634 aa8.76□□□□□ -1.01
CACNA1D-227ENST00000637844 CENPBP07199 599 aaPredicted RBP8.76□□□□□ -1.01
CACNA1D-227ENST00000637844 SIGLEC1Q9BZZ2 1709 aa8.76□□□□□ -1.01
CACNA1D-227ENST00000637844 CFAP65Q6ZU64 1925 aaKnown RBP8.76□□□□□ -1.01
CACNA1D-227ENST00000637844 GPRASP1Q5JY77 1395 aa8.75□□□□□ -1.01
CACNA1D-227ENST00000637844 CCDC7Q96M83 1385 aa8.75□□□□□ -1.01
CACNA1D-227ENST00000637844 NOS1P29475 1434 aa8.75□□□□□ -1.01
CACNA1D-227ENST00000637844 CHGAP10645 457 aaKnown RBP8.75□□□□□ -1.01
CACNA1D-227ENST00000637844 TRHP20396 242 aaPredicted RBP8.75□□□□□ -1.01
CACNA1D-227ENST00000637844 PPLO60437 1756 aa8.75□□□□□ -1.01
CACNA1D-227ENST00000637844 WASHC2AQ641Q2 1341 aa8.75□□□□□ -1.01
CACNA1D-227ENST00000637844 RPGRIP1LQ68CZ1 1315 aa8.75□□□□□ -1.01
CACNA1D-227ENST00000637844 SYNMO15061 1565 aa8.74□□□□□ -1.01
CACNA1D-227ENST00000637844 SLC52A1Q9NWF4 448 aa8.74□□□□□ -1.01
CACNA1D-227ENST00000637844 IQGAP1P46940 1657 aa8.74□□□□□ -1.01
CACNA1D-227ENST00000637844 EIF3AQ14152 1382 aaKnown RBP8.73□□□□□ -1.01
CACNA1D-227ENST00000637844 COL17A1Q9UMD9 1497 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms