RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 CCDC141Q6ZP82 1450 aa14.06□□□□□ -0.16
CLN8-214ENST00000637594 MYO3AQ8NEV4 1616 aa14.05□□□□□ -0.16
CLN8-214ENST00000637594 WASHC2CQ9Y4E1 1318 aa14.05□□□□□ -0.16
CLN8-214ENST00000637594 ILDR2Q71H61 639 aa14.04□□□□□ -0.16
CLN8-214ENST00000637594 THEMISQ8N1K5 641 aaPredicted RBP14.03□□□□□ -0.16
CLN8-214ENST00000637594 TNRQ92752 1358 aa14.03□□□□□ -0.16
CLN8-214ENST00000637594 PZPP20742 1482 aa14.03□□□□□ -0.16
CLN8-214ENST00000637594 CAMSAP2Q08AD1 1489 aa14.03□□□□□ -0.16
CLN8-214ENST00000637594 DNMT1P26358 1616 aaKnown RBP14.02□□□□□ -0.16
CLN8-214ENST00000637594 MIA2Q96PC5 1412 aa14.02□□□□□ -0.16
CLN8-214ENST00000637594 SOCS7O14512 581 aa14.02□□□□□ -0.17
CLN8-214ENST00000637594 ARHGEF5Q12774 1597 aa14.01□□□□□ -0.17
CLN8-214ENST00000637594 UBAP1LF5GYI3 381 aa14.01□□□□□ -0.17
CLN8-214ENST00000637594 ANKLE2Q86XL3 938 aa14.01□□□□□ -0.17
CLN8-214ENST00000637594 KDM5DQ9BY66 1539 aa14□□□□□ -0.17
CLN8-214ENST00000637594 LRRC9Q6ZRR7 1453 aa13.99□□□□□ -0.17
CLN8-214ENST00000637594 MAP3K1Q13233 1512 aa13.99□□□□□ -0.17
CLN8-214ENST00000637594 NLRP1Q9C000 1473 aa13.99□□□□□ -0.17
CLN8-214ENST00000637594 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
CLN8-214ENST00000637594 LOC105371045A0A1W2PR82 267 aa13.97□□□□□ -0.17
CLN8-214ENST00000637594 MED14O60244 1454 aa13.96□□□□□ -0.17
CLN8-214ENST00000637594 KANK4Q5T7N3 995 aaPredicted RBP13.96□□□□□ -0.17
CLN8-214ENST00000637594 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.96□□□□□ -0.18
CLN8-214ENST00000637594 SHANK2Q9UPX8 1470 aa13.95□□□□□ -0.18
CLN8-214ENST00000637594 TOM1O60784 492 aa13.95□□□□□ -0.18
CLN8-214ENST00000637594 MAST1Q9Y2H9 1570 aa13.95□□□□□ -0.18
CLN8-214ENST00000637594 CPS1P31327 1500 aa13.95□□□□□ -0.18
CLN8-214ENST00000637594 NEURL4Q96JN8 1562 aa13.94□□□□□ -0.18
CLN8-214ENST00000637594 UGGT1Q9NYU2 1555 aa13.92□□□□□ -0.18
CLN8-214ENST00000637594 MYOM3Q5VTT5 1437 aa13.92□□□□□ -0.18
CLN8-214ENST00000637594 NPHP4O75161 1426 aaPredicted RBP13.91□□□□□ -0.18
CLN8-214ENST00000637594 ABCC3O15438 1527 aa13.91□□□□□ -0.18
CLN8-214ENST00000637594 DEPDC5O75140 1603 aa13.91□□□□□ -0.18
CLN8-214ENST00000637594 RNF17Q9BXT8 1623 aaKnown RBP13.91□□□□□ -0.18
CLN8-214ENST00000637594 SPATA31D1Q6ZQQ2 1576 aa13.91□□□□□ -0.18
CLN8-214ENST00000637594 VWDEQ8N2E2 1590 aa13.89□□□□□ -0.19
CLN8-214ENST00000637594 POLR1AO95602 1720 aaPredicted RBP13.89□□□□□ -0.19
CLN8-214ENST00000637594 EIF2AK4Q9P2K8 1649 aaKnown RBP13.89□□□□□ -0.19
CLN8-214ENST00000637594 ARHGAP31Q2M1Z3 1444 aa13.89□□□□□ -0.19
CLN8-214ENST00000637594 HSPA1LP34931 641 aa13.88□□□□□ -0.19
CLN8-214ENST00000637594 DUOX2Q9NRD8 1548 aa13.88□□□□□ -0.19
CLN8-214ENST00000637594 ERVK-7P63135 1459 aa13.87□□□□□ -0.19
CLN8-214ENST00000637594 ZC3H13Q5T200 1668 aaKnown RBP13.87□□□□□ -0.19
CLN8-214ENST00000637594 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
CLN8-214ENST00000637594 MROH1Q8NDA8 1641 aa13.86□□□□□ -0.19
CLN8-214ENST00000637594 ABCC5O15440 1437 aa13.85□□□□□ -0.19
CLN8-214ENST00000637594 ERBINQ96RT1 1412 aa13.84□□□□□ -0.19
CLN8-214ENST00000637594 RRP7BPQ9NSQ0 103 aa13.84□□□□□ -0.19
CLN8-214ENST00000637594 KIF15Q9NS87 1388 aa13.83□□□□□ -0.19
CLN8-214ENST00000637594 LTKP29376 864 aa13.83□□□□□ -0.2
CLN8-214ENST00000637594 ARHGAP23Q9P227 1491 aa13.82□□□□□ -0.2
CLN8-214ENST00000637594 LRRC7Q96NW7 1537 aa13.82□□□□□ -0.2
CLN8-214ENST00000637594 APLP2Q06481 763 aa13.82□□□□□ -0.2
CLN8-214ENST00000637594 TXNDC2Q86VQ3 553 aa13.82□□□□□ -0.2
CLN8-214ENST00000637594 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
CLN8-214ENST00000637594 IQGAP1P46940 1657 aa13.82□□□□□ -0.2
CLN8-214ENST00000637594 SLIT1O75093 1534 aa13.81□□□□□ -0.2
CLN8-214ENST00000637594 ALKQ9UM73 1620 aa13.81□□□□□ -0.2
CLN8-214ENST00000637594 EID1Q9Y6B2 187 aa13.8□□□□□ -0.2
CLN8-214ENST00000637594 SCAF11Q99590 1463 aaKnown RBP13.8□□□□□ -0.2
CLN8-214ENST00000637594 PRDM15P57071 1507 aaPredicted RBP13.8□□□□□ -0.2
CLN8-214ENST00000637594 DAPK1P53355 1430 aa13.79□□□□□ -0.2
CLN8-214ENST00000637594 UBR1Q8IWV7 1749 aa13.78□□□□□ -0.2
CLN8-214ENST00000637594 IDI1Q13907 227 aa13.78□□□□□ -0.2
CLN8-214ENST00000637594 KANK1Q14678 1352 aa13.78□□□□□ -0.2
CLN8-214ENST00000637594 ANKRD30AQ9BXX3 1397 aa13.78□□□□□ -0.2
CLN8-214ENST00000637594 TMEM2Q9UHN6 1383 aa13.78□□□□□ -0.2
CLN8-214ENST00000637594 FGD6Q6ZV73 1430 aa13.77□□□□□ -0.21
CLN8-214ENST00000637594 LMTK2Q8IWU2 1503 aa13.77□□□□□ -0.21
CLN8-214ENST00000637594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLN8-214ENST00000637594 PTPN23Q9H3S7 1636 aa13.77□□□□□ -0.21
CLN8-214ENST00000637594 STRCP1A6NGW2 1772 aa13.76□□□□□ -0.21
CLN8-214ENST00000637594 CEP152O94986 1710 aa13.76□□□□□ -0.21
CLN8-214ENST00000637594 SLC52A1Q9NWF4 448 aa13.75□□□□□ -0.21
CLN8-214ENST00000637594 SYNMO15061 1565 aa13.75□□□□□ -0.21
CLN8-214ENST00000637594 MED1Q15648 1581 aaPredicted RBP13.75□□□□□ -0.21
CLN8-214ENST00000637594 KCNA6P17658 529 aa13.74□□□□□ -0.21
CLN8-214ENST00000637594 CHIC2Q9UKJ5 165 aa13.74□□□□□ -0.21
CLN8-214ENST00000637594 CROCC2H7BZ55 1655 aa13.73□□□□□ -0.21
CLN8-214ENST00000637594 CFAP65Q6ZU64 1925 aaKnown RBP13.73□□□□□ -0.21
CLN8-214ENST00000637594 STAG3Q9UJ98 1225 aa13.73□□□□□ -0.21
CLN8-214ENST00000637594 NOS1P29475 1434 aa13.73□□□□□ -0.21
CLN8-214ENST00000637594 KDM5AP29375 1690 aaKnown RBP13.72□□□□□ -0.21
CLN8-214ENST00000637594 FAM135BQ49AJ0 1406 aa13.72□□□□□ -0.21
CLN8-214ENST00000637594 ADGRL2O95490 1459 aa13.71□□□□□ -0.21
CLN8-214ENST00000637594 TET3O43151 1660 aa13.7□□□□□ -0.22
CLN8-214ENST00000637594 EFCAB6Q5THR3 1501 aa13.69□□□□□ -0.22
CLN8-214ENST00000637594 PIK3C2BO00750 1634 aa13.69□□□□□ -0.22
CLN8-214ENST00000637594 HDGFP51858 240 aaKnown RBP13.68□□□□□ -0.22
CLN8-214ENST00000637594 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
CLN8-214ENST00000637594 RPRD2Q5VT52 1461 aaKnown RBP13.67□□□□□ -0.22
CLN8-214ENST00000637594 SLC26A8Q96RN1 970 aa13.67□□□□□ -0.22
CLN8-214ENST00000637594 TMEM94Q12767 1356 aa13.67□□□□□ -0.22
CLN8-214ENST00000637594 ANKRD50Q9ULJ7 1429 aa13.66□□□□□ -0.22
CLN8-214ENST00000637594 PROSER2Q86WR7 435 aaPredicted RBP13.66□□□□□ -0.22
CLN8-214ENST00000637594 RGS17Q9UGC6 210 aaPredicted RBP13.66□□□□□ -0.22
CLN8-214ENST00000637594 XIRP1Q702N8 1843 aaKnown RBP13.64□□□□□ -0.23
CLN8-214ENST00000637594 FAM50AQ14320 339 aaKnown RBP13.64□□□□□ -0.23
CLN8-214ENST00000637594 TBX22Q9Y458 520 aa13.64□□□□□ -0.23
CLN8-214ENST00000637594 ZFYVE9O95405 1425 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms