RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 FAM135AQ9P2D6 1515 aa35.85■■■■□ 3.33
CHRNA7-229ENST00000637552 CEP170BQ9Y4F5 1589 aaPredicted RBP35.85■■■■□ 3.33
CHRNA7-229ENST00000637552 KDM5DQ9BY66 1539 aa35.84■■■■□ 3.33
CHRNA7-229ENST00000637552 MAST1Q9Y2H9 1570 aa35.84■■■■□ 3.33
CHRNA7-229ENST00000637552 WASHC2CQ9Y4E1 1318 aa35.79■■■■□ 3.32
CHRNA7-229ENST00000637552 PZPP20742 1482 aa35.74■■■■□ 3.31
CHRNA7-229ENST00000637552 PLA2R1Q13018 1463 aa35.74■■■■□ 3.31
CHRNA7-229ENST00000637552 NCKAP5LQ9HCH0 1330 aa35.72■■■■□ 3.31
CHRNA7-229ENST00000637552 A2ML1A8K2U0 1454 aa35.72■■■■□ 3.31
CHRNA7-229ENST00000637552 TNRQ92752 1358 aa35.71■■■■□ 3.31
CHRNA7-229ENST00000637552 RNF17Q9BXT8 1623 aaKnown RBP35.71■■■■□ 3.31
CHRNA7-229ENST00000637552 EIF2AK4Q9P2K8 1649 aaKnown RBP35.7■■■■□ 3.31
CHRNA7-229ENST00000637552 PKD2Q13563 968 aa35.69■■■■□ 3.3
CHRNA7-229ENST00000637552 FBXO31Q5XUX0 539 aaPredicted RBP35.69■■■■□ 3.3
CHRNA7-229ENST00000637552 PTPN23Q9H3S7 1636 aa35.68■■■■□ 3.3
CHRNA7-229ENST00000637552 TCOF1Q13428 1488 aaKnown RBP35.67■■■■□ 3.3
CHRNA7-229ENST00000637552 DNMT1P26358 1616 aaKnown RBP35.66■■■■□ 3.3
CHRNA7-229ENST00000637552 LTBP4Q8N2S1 1624 aa35.65■■■■□ 3.3
CHRNA7-229ENST00000637552 CROCC2H7BZ55 1655 aa35.64■■■■□ 3.3
CHRNA7-229ENST00000637552 ZC3H13Q5T200 1668 aaKnown RBP35.64■■■■□ 3.3
CHRNA7-229ENST00000637552 DUOX2Q9NRD8 1548 aa35.63■■■■□ 3.29
CHRNA7-229ENST00000637552 SHANK2Q9UPX8 1470 aa35.62■■■■□ 3.29
CHRNA7-229ENST00000637552 ABCC3O15438 1527 aa35.61■■■■□ 3.29
CHRNA7-229ENST00000637552 FGD6Q6ZV73 1430 aa35.6■■■■□ 3.29
CHRNA7-229ENST00000637552 ABCC5O15440 1437 aa35.59■■■■□ 3.29
CHRNA7-229ENST00000637552 KIF15Q9NS87 1388 aa35.57■■■■□ 3.28
CHRNA7-229ENST00000637552 MROH1Q8NDA8 1641 aa35.56■■■■□ 3.28
CHRNA7-229ENST00000637552 NLRP1Q9C000 1473 aa35.55■■■■□ 3.28
CHRNA7-229ENST00000637552 DAPK1P53355 1430 aa35.55■■■■□ 3.28
CHRNA7-229ENST00000637552 IQSEC2Q5JU85 1478 aa35.54■■■■□ 3.28
CHRNA7-229ENST00000637552 POLR1AO95602 1720 aaPredicted RBP35.53■■■■□ 3.28
CHRNA7-229ENST00000637552 ZNF335Q9H4Z2 1342 aaPredicted RBP35.53■■■■□ 3.28
CHRNA7-229ENST00000637552 CEP152O94986 1710 aa35.52■■■■□ 3.28
CHRNA7-229ENST00000637552 ERBINQ96RT1 1412 aa35.51■■■■□ 3.28
CHRNA7-229ENST00000637552 RRP7BPQ9NSQ0 103 aa35.5■■■■□ 3.27
CHRNA7-229ENST00000637552 UGGT1Q9NYU2 1555 aa35.49■■■■□ 3.27
CHRNA7-229ENST00000637552 SPATA31D1Q6ZQQ2 1576 aa35.48■■■■□ 3.27
CHRNA7-229ENST00000637552 THEMISQ8N1K5 641 aaPredicted RBP35.46■■■■□ 3.27
CHRNA7-229ENST00000637552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.46■■■■□ 3.27
CHRNA7-229ENST00000637552 ERVK-7P63135 1459 aa35.46■■■■□ 3.27
CHRNA7-229ENST00000637552 PRDM15P57071 1507 aaPredicted RBP35.46■■■■□ 3.27
CHRNA7-229ENST00000637552 NEURL4Q96JN8 1562 aa35.44■■■■□ 3.26
CHRNA7-229ENST00000637552 ANKRD30AQ9BXX3 1397 aa35.42■■■■□ 3.26
CHRNA7-229ENST00000637552 ANKLE2Q86XL3 938 aa35.42■■■■□ 3.26
CHRNA7-229ENST00000637552 CHIC2Q9UKJ5 165 aa35.41■■■■□ 3.26
CHRNA7-229ENST00000637552 CFAP65Q6ZU64 1925 aaKnown RBP35.4■■■■□ 3.26
CHRNA7-229ENST00000637552 DEPDC5O75140 1603 aa35.37■■■■□ 3.25
CHRNA7-229ENST00000637552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.37■■■■□ 3.25
CHRNA7-229ENST00000637552 KANK1Q14678 1352 aa35.35■■■■□ 3.25
CHRNA7-229ENST00000637552 FAM50AQ14320 339 aaKnown RBP35.34■■■■□ 3.25
CHRNA7-229ENST00000637552 ARHGAP31Q2M1Z3 1444 aa35.33■■■■□ 3.25
CHRNA7-229ENST00000637552 NPHP4O75161 1426 aaPredicted RBP35.31■■■■□ 3.24
CHRNA7-229ENST00000637552 MED14O60244 1454 aa35.29■■■■□ 3.24
CHRNA7-229ENST00000637552 ADGRL2O95490 1459 aa35.28■■■■□ 3.24
CHRNA7-229ENST00000637552 UBAP1LF5GYI3 381 aa35.27■■■■□ 3.24
CHRNA7-229ENST00000637552 UBR1Q8IWV7 1749 aa35.26■■■■□ 3.24
CHRNA7-229ENST00000637552 IQGAP1P46940 1657 aa35.26■■■■□ 3.23
CHRNA7-229ENST00000637552 CPS1P31327 1500 aa35.26■■■■□ 3.23
CHRNA7-229ENST00000637552 LMTK2Q8IWU2 1503 aa35.22■■■■□ 3.23
CHRNA7-229ENST00000637552 VWDEQ8N2E2 1590 aa35.21■■■■□ 3.23
CHRNA7-229ENST00000637552 SCAF11Q99590 1463 aaKnown RBP35.16■■■■□ 3.22
CHRNA7-229ENST00000637552 ANKRD50Q9ULJ7 1429 aa35.15■■■■□ 3.22
CHRNA7-229ENST00000637552 PIK3C2BO00750 1634 aa35.14■■■■□ 3.22
CHRNA7-229ENST00000637552 EFCAB6Q5THR3 1501 aa35.13■■■■□ 3.21
CHRNA7-229ENST00000637552 SLIT1O75093 1534 aa35.12■■■■□ 3.21
CHRNA7-229ENST00000637552 ARHGAP23Q9P227 1491 aa35.11■■■■□ 3.21
CHRNA7-229ENST00000637552 STAG3Q9UJ98 1225 aa35.11■■■■□ 3.21
CHRNA7-229ENST00000637552 DISP3Q9P2K9 1392 aa35.09■■■■□ 3.21
CHRNA7-229ENST00000637552 TXNDC2Q86VQ3 553 aa35.08■■■■□ 3.21
CHRNA7-229ENST00000637552 EID1Q9Y6B2 187 aa35.07■■■■□ 3.2
CHRNA7-229ENST00000637552 SYNMO15061 1565 aa35.06■■■■□ 3.2
CHRNA7-229ENST00000637552 KDM5AP29375 1690 aaKnown RBP35.05■■■■□ 3.2
CHRNA7-229ENST00000637552 TOM1O60784 492 aa35.05■■■■□ 3.2
CHRNA7-229ENST00000637552 LTKP29376 864 aa35.05■■■■□ 3.2
CHRNA7-229ENST00000637552 SCAF1Q9H7N4 1312 aaKnown RBP35.05■■■■□ 3.2
CHRNA7-229ENST00000637552 TMEM2Q9UHN6 1383 aa35.03■■■■□ 3.2
CHRNA7-229ENST00000637552 NOS1P29475 1434 aa35.03■■■■□ 3.2
CHRNA7-229ENST00000637552 IDI1Q13907 227 aa35.02■■■■□ 3.2
CHRNA7-229ENST00000637552 STRCP1A6NGW2 1772 aa35.02■■■■□ 3.2
CHRNA7-229ENST00000637552 PIP4K2BP78356 416 aa35■■■■□ 3.19
CHRNA7-229ENST00000637552 RPRD2Q5VT52 1461 aaKnown RBP35■■■■□ 3.19
CHRNA7-229ENST00000637552 TET3O43151 1660 aa34.98■■■■□ 3.19
CHRNA7-229ENST00000637552 ROCK1Q13464 1354 aa34.98■■■■□ 3.19
CHRNA7-229ENST00000637552 UNC13BO14795 1591 aa34.97■■■■□ 3.19
CHRNA7-229ENST00000637552 ADGRB3O60242 1522 aa34.96■■■■□ 3.19
CHRNA7-229ENST00000637552 PPARGC1BQ86YN6 1023 aaKnown RBP34.96■■■■□ 3.19
CHRNA7-229ENST00000637552 LRRC7Q96NW7 1537 aa34.96■■■■□ 3.19
CHRNA7-229ENST00000637552 SLC52A1Q9NWF4 448 aa34.94■■■■□ 3.18
CHRNA7-229ENST00000637552 GCC2Q8IWJ2 1684 aa34.93■■■■□ 3.18
CHRNA7-229ENST00000637552 ITGAEP38570 1179 aa34.92■■■■□ 3.18
CHRNA7-229ENST00000637552 HSPA1LP34931 641 aa34.86■■■■□ 3.17
CHRNA7-229ENST00000637552 ALKQ9UM73 1620 aa34.84■■■■□ 3.17
CHRNA7-229ENST00000637552 IQGAP3Q86VI3 1631 aa34.83■■■■□ 3.17
CHRNA7-229ENST00000637552 E9PCH4 1651 aa34.81■■■■□ 3.16
CHRNA7-229ENST00000637552 MYO5BQ9ULV0 1848 aa34.79■■■■□ 3.16
CHRNA7-229ENST00000637552 ILDR2Q71H61 639 aa34.78■■■■□ 3.16
CHRNA7-229ENST00000637552 NUP155O75694 1391 aa34.77■■■■□ 3.16
CHRNA7-229ENST00000637552 BCANQ96GW7 911 aa34.77■■■■□ 3.16
CHRNA7-229ENST00000637552 SLC26A8Q96RN1 970 aa34.77■■■■□ 3.16
CHRNA7-229ENST00000637552 TMEM131LA2VDJ0 1609 aa34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms