RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 KIF3BO15066 747 aa20.04■□□□□ 0.8
CLN5-218ENST00000637397 SOX12O15370 315 aa20.03■□□□□ 0.8
CLN5-218ENST00000637397 NBPF8Q3BBV2 869 aa20.02■□□□□ 0.8
CLN5-218ENST00000637397 AKNAQ7Z591 1439 aa20.02■□□□□ 0.79
CLN5-218ENST00000637397 CDCA7LQ96GN5 454 aa20.01■□□□□ 0.79
CLN5-218ENST00000637397 FOXD4L1Q9NU39 408 aa20.01■□□□□ 0.79
CLN5-218ENST00000637397 E9PSI1 815 aa20.01■□□□□ 0.79
CLN5-218ENST00000637397 CUX1P39880 1505 aa20.01■□□□□ 0.79
CLN5-218ENST00000637397 CGNL1Q0VF96 1302 aa19.99■□□□□ 0.79
CLN5-218ENST00000637397 HDGFL2Q7Z4V5 671 aaPredicted RBP19.98■□□□□ 0.79
CLN5-218ENST00000637397 TRAK1Q9UPV9 953 aa19.98■□□□□ 0.79
CLN5-218ENST00000637397 OS9Q13438 667 aaPredicted RBP19.97■□□□□ 0.79
CLN5-218ENST00000637397 MSH5O43196 834 aa19.97■□□□□ 0.79
CLN5-218ENST00000637397 NFKBIBQ15653 356 aa19.96■□□□□ 0.79
CLN5-218ENST00000637397 ZRSR1Q15695 479 aaKnown RBP19.96■□□□□ 0.79
CLN5-218ENST00000637397 CFAP44Q96MT7 982 aa19.96■□□□□ 0.79
CLN5-218ENST00000637397 KCNJ4P48050 445 aa19.96■□□□□ 0.79
CLN5-218ENST00000637397 CFTRP13569 1480 aa19.95■□□□□ 0.78
CLN5-218ENST00000637397 GAPVD1Q14C86 1478 aa19.95■□□□□ 0.78
CLN5-218ENST00000637397 MCCP23508 829 aa19.95■□□□□ 0.78
CLN5-218ENST00000637397 SPAG9O60271 1321 aaKnown RBP19.95■□□□□ 0.78
CLN5-218ENST00000637397 BRD4O60885 1362 aaPredicted RBP19.94■□□□□ 0.78
CLN5-218ENST00000637397 FYCO1Q9BQS8 1478 aa19.94■□□□□ 0.78
CLN5-218ENST00000637397 PTMSP20962 102 aa19.94■□□□□ 0.78
CLN5-218ENST00000637397 NUTM2DQ5VT03 806 aaPredicted RBP19.94■□□□□ 0.78
CLN5-218ENST00000637397 HAP1P54257 671 aaPredicted RBP19.93■□□□□ 0.78
CLN5-218ENST00000637397 HFM1A2PYH4 1435 aa19.93■□□□□ 0.78
CLN5-218ENST00000637397 TIAM1Q13009 1591 aa19.93■□□□□ 0.78
CLN5-218ENST00000637397 PNISRQ8TF01 805 aaKnown RBP19.92■□□□□ 0.78
CLN5-218ENST00000637397 ADAMTS8Q9UP79 889 aa19.92■□□□□ 0.78
CLN5-218ENST00000637397 TOP2BQ02880 1626 aa19.92■□□□□ 0.78
CLN5-218ENST00000637397 CALD1Q05682 793 aaKnown RBP19.91■□□□□ 0.78
CLN5-218ENST00000637397 NCAPD3P42695 1498 aa19.91■□□□□ 0.78
CLN5-218ENST00000637397 GOLGA6L4A6NEF3 574 aa19.89■□□□□ 0.78
CLN5-218ENST00000637397 ZKSCAN2Q63HK3 967 aa19.89■□□□□ 0.78
CLN5-218ENST00000637397 ARID3AQ99856 593 aa19.89■□□□□ 0.77
CLN5-218ENST00000637397 FGD1P98174 961 aa19.89■□□□□ 0.77
CLN5-218ENST00000637397 ANKRD50Q9ULJ7 1429 aa19.88■□□□□ 0.77
CLN5-218ENST00000637397 RSPH6AQ9H0K4 717 aa19.88■□□□□ 0.77
CLN5-218ENST00000637397 RTF1Q92541 710 aaKnown RBP19.87■□□□□ 0.77
CLN5-218ENST00000637397 TERF2IPQ9NYB0 399 aa19.86■□□□□ 0.77
CLN5-218ENST00000637397 DDX11L8A8MPP1 907 aa19.86■□□□□ 0.77
CLN5-218ENST00000637397 ELL2O00472 640 aaPredicted RBP19.86■□□□□ 0.77
CLN5-218ENST00000637397 MLECQ14165 292 aa19.85■□□□□ 0.77
CLN5-218ENST00000637397 BACH2Q9BYV9 841 aa19.85■□□□□ 0.77
CLN5-218ENST00000637397 TAOK2Q9UL54 1235 aa19.85■□□□□ 0.77
CLN5-218ENST00000637397 MIA2Q96PC5 1412 aa19.85■□□□□ 0.77
CLN5-218ENST00000637397 CHAF1AQ13111 956 aaPredicted RBP19.85■□□□□ 0.77
CLN5-218ENST00000637397 IL27Q8NEV9 243 aa19.85■□□□□ 0.77
CLN5-218ENST00000637397 C11orf95C9JLR9 678 aaPredicted RBP19.84■□□□□ 0.77
CLN5-218ENST00000637397 PANK1Q8TE04 598 aa19.84■□□□□ 0.77
CLN5-218ENST00000637397 SMG6Q86US8 1419 aaKnown RBP19.84■□□□□ 0.77
CLN5-218ENST00000637397 ANKRD45Q5TZF3 282 aa19.84■□□□□ 0.77
CLN5-218ENST00000637397 LMOD2Q6P5Q4 547 aa19.82■□□□□ 0.76
CLN5-218ENST00000637397 NAP1L2Q9ULW6 460 aaPredicted RBP19.81■□□□□ 0.76
CLN5-218ENST00000637397 NAIPQ13075 1403 aa19.81■□□□□ 0.76
CLN5-218ENST00000637397 NBPF1Q3BBV0 1214 aa19.81■□□□□ 0.76
CLN5-218ENST00000637397 BRPF3Q9ULD4 1205 aa19.81■□□□□ 0.76
CLN5-218ENST00000637397 NOL8Q76FK4 1167 aaKnown RBP19.81■□□□□ 0.76
CLN5-218ENST00000637397 DDX49Q9Y6V7 483 aaKnown RBP19.8■□□□□ 0.76
CLN5-218ENST00000637397 KIAA2012Q0VF49 1180 aa19.8■□□□□ 0.76
CLN5-218ENST00000637397 KIAA1211Q6ZU35 1233 aa19.8■□□□□ 0.76
CLN5-218ENST00000637397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.8■□□□□ 0.76
CLN5-218ENST00000637397 FRAT2O75474 233 aaPredicted RBP19.79■□□□□ 0.76
CLN5-218ENST00000637397 NGEFQ8N5V2 710 aa19.79■□□□□ 0.76
CLN5-218ENST00000637397 FOXD4L5Q5VV16 416 aaPredicted RBP19.79■□□□□ 0.76
CLN5-218ENST00000637397 SLC4A10Q6U841 1118 aa19.79■□□□□ 0.76
CLN5-218ENST00000637397 DRC7Q8IY82 874 aa19.79■□□□□ 0.76
CLN5-218ENST00000637397 DZIP1LQ8IYY4 767 aaKnown RBP19.79■□□□□ 0.76
CLN5-218ENST00000637397 FOXD4L4Q8WXT5 416 aaPredicted RBP19.79■□□□□ 0.76
CLN5-218ENST00000637397 HSP90AA2PQ14568 343 aaPredicted RBP19.78■□□□□ 0.76
CLN5-218ENST00000637397 A0A0G2JS52 829 aa19.78■□□□□ 0.76
CLN5-218ENST00000637397 CHMP5Q9NZZ3 219 aa19.78■□□□□ 0.76
CLN5-218ENST00000637397 WASHC2CQ9Y4E1 1318 aa19.78■□□□□ 0.76
CLN5-218ENST00000637397 TRIM6-TRIM34B2RNG4 842 aa19.77■□□□□ 0.76
CLN5-218ENST00000637397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.77■□□□□ 0.76
CLN5-218ENST00000637397 PTPRGP23470 1445 aa19.77■□□□□ 0.75
CLN5-218ENST00000637397 SYAP1Q96A49 352 aaPredicted RBP19.76■□□□□ 0.75
CLN5-218ENST00000637397 DDX19BQ9UMR2 479 aa19.76■□□□□ 0.75
CLN5-218ENST00000637397 ST18O60284 1047 aa19.76■□□□□ 0.75
CLN5-218ENST00000637397 HMMRO75330 724 aa19.75■□□□□ 0.75
CLN5-218ENST00000637397 PPP2R1AP30153 589 aa19.75■□□□□ 0.75
CLN5-218ENST00000637397 RUNDC1Q96C34 613 aa19.74■□□□□ 0.75
CLN5-218ENST00000637397 AQRO60306 1485 aaKnown RBP eCLIP19.74■□□□□ 0.75
CLN5-218ENST00000637397 EFCAB5A4FU69 1503 aa19.74■□□□□ 0.75
CLN5-218ENST00000637397 STK31Q9BXU1 1019 aa19.73■□□□□ 0.75
CLN5-218ENST00000637397 C22orf23Q9BZE7 217 aa19.73■□□□□ 0.75
CLN5-218ENST00000637397 GOLGA6L6A8MZA4 724 aa19.72■□□□□ 0.75
CLN5-218ENST00000637397 SKOR2Q2VWA4 1001 aaPredicted RBP19.72■□□□□ 0.75
CLN5-218ENST00000637397 KIAA1107Q9UPP5 1409 aa19.72■□□□□ 0.75
CLN5-218ENST00000637397 ANO8Q9HCE9 1232 aaPredicted RBP19.72■□□□□ 0.75
CLN5-218ENST00000637397 LNPKQ9C0E8 428 aa19.71■□□□□ 0.75
CLN5-218ENST00000637397 BCAR3O75815 825 aa19.71■□□□□ 0.75
CLN5-218ENST00000637397 HDGFP51858 240 aaKnown RBP19.71■□□□□ 0.75
CLN5-218ENST00000637397 LMOD3Q0VAK6 560 aa19.7■□□□□ 0.74
CLN5-218ENST00000637397 EVC2Q86UK5 1308 aa19.7■□□□□ 0.74
CLN5-218ENST00000637397 NRDCO43847 1150 aa19.7■□□□□ 0.74
CLN5-218ENST00000637397 EHBP1L1Q8N3D4 1523 aa19.69■□□□□ 0.74
CLN5-218ENST00000637397 RIPK4P57078 832 aa19.69■□□□□ 0.74
CLN5-218ENST00000637397 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms