RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 FAM50AQ14320 339 aaKnown RBP21.33■■□□□ 1.01
PNKP-228ENST00000637325 KDM5DQ9BY66 1539 aa21.33■■□□□ 1
PNKP-228ENST00000637325 DUOX2Q9NRD8 1548 aa21.33■■□□□ 1
PNKP-228ENST00000637325 RRP7BPQ9NSQ0 103 aa21.32■■□□□ 1
PNKP-228ENST00000637325 FAM135AQ9P2D6 1515 aa21.32■■□□□ 1
PNKP-228ENST00000637325 CFAP65Q6ZU64 1925 aaKnown RBP21.31■■□□□ 1
PNKP-228ENST00000637325 PTPRKQ15262 1439 aa21.31■■□□□ 1
PNKP-228ENST00000637325 STRCQ7RTU9 1775 aa21.31■■□□□ 1
PNKP-228ENST00000637325 RNF17Q9BXT8 1623 aaKnown RBP21.31■■□□□ 1
PNKP-228ENST00000637325 CHIC2Q9UKJ5 165 aa21.3■■□□□ 1
PNKP-228ENST00000637325 KIF15Q9NS87 1388 aa21.3■■□□□ 1
PNKP-228ENST00000637325 MYO3AQ8NEV4 1616 aa21.29■■□□□ 1
PNKP-228ENST00000637325 DMRT2Q9Y5R5 561 aa21.28■■□□□ 1
PNKP-228ENST00000637325 ANKRD30AQ9BXX3 1397 aa21.27■■□□□ 1
PNKP-228ENST00000637325 ZC3H13Q5T200 1668 aaKnown RBP21.26■□□□□ 0.99
PNKP-228ENST00000637325 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
PNKP-228ENST00000637325 PZPP20742 1482 aa21.25■□□□□ 0.99
PNKP-228ENST00000637325 ZNF142P52746 1687 aaPredicted RBP21.24■□□□□ 0.99
PNKP-228ENST00000637325 CEP152O94986 1710 aa21.24■□□□□ 0.99
PNKP-228ENST00000637325 ERBINQ96RT1 1412 aa21.24■□□□□ 0.99
PNKP-228ENST00000637325 FBXO31Q5XUX0 539 aaPredicted RBP21.24■□□□□ 0.99
PNKP-228ENST00000637325 CAMSAP1Q5T5Y3 1602 aa21.23■□□□□ 0.99
PNKP-228ENST00000637325 ILDR1Q86SU0 546 aaPredicted RBP21.23■□□□□ 0.99
PNKP-228ENST00000637325 CEP170BQ9Y4F5 1589 aaPredicted RBP21.23■□□□□ 0.99
PNKP-228ENST00000637325 TNRQ92752 1358 aa21.23■□□□□ 0.99
PNKP-228ENST00000637325 ABCC3O15438 1527 aa21.22■□□□□ 0.99
PNKP-228ENST00000637325 MROH1Q8NDA8 1641 aa21.21■□□□□ 0.99
PNKP-228ENST00000637325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.2■□□□□ 0.98
PNKP-228ENST00000637325 NCOA1Q15788 1441 aa21.2■□□□□ 0.98
PNKP-228ENST00000637325 A2ML1A8K2U0 1454 aa21.18■□□□□ 0.98
PNKP-228ENST00000637325 KANK1Q14678 1352 aa21.17■□□□□ 0.98
PNKP-228ENST00000637325 ADGRL2O95490 1459 aa21.17■□□□□ 0.98
PNKP-228ENST00000637325 PTPRTO14522 1441 aa21.16■□□□□ 0.98
PNKP-228ENST00000637325 DEPDC5O75140 1603 aa21.15■□□□□ 0.98
PNKP-228ENST00000637325 PRDM15P57071 1507 aaPredicted RBP21.15■□□□□ 0.98
PNKP-228ENST00000637325 NCKAP5LQ9HCH0 1330 aa21.15■□□□□ 0.98
PNKP-228ENST00000637325 PLA2R1Q13018 1463 aa21.13■□□□□ 0.97
PNKP-228ENST00000637325 ITGAEP38570 1179 aa21.12■□□□□ 0.97
PNKP-228ENST00000637325 PKD2Q13563 968 aa21.12■□□□□ 0.97
PNKP-228ENST00000637325 NLRP1Q9C000 1473 aa21.12■□□□□ 0.97
PNKP-228ENST00000637325 FBXO41Q8TF61 875 aa21.11■□□□□ 0.97
PNKP-228ENST00000637325 SPATA31D1Q6ZQQ2 1576 aa21.1■□□□□ 0.97
PNKP-228ENST00000637325 ERVK-7P63135 1459 aa21.1■□□□□ 0.97
PNKP-228ENST00000637325 CERKQ8TCT0 537 aa21.1■□□□□ 0.97
PNKP-228ENST00000637325 ANKRD50Q9ULJ7 1429 aa21.1■□□□□ 0.97
PNKP-228ENST00000637325 THEMISQ8N1K5 641 aaPredicted RBP21.09■□□□□ 0.97
PNKP-228ENST00000637325 POLR1AO95602 1720 aaPredicted RBP21.09■□□□□ 0.97
PNKP-228ENST00000637325 UGGT1Q9NYU2 1555 aa21.07■□□□□ 0.96
PNKP-228ENST00000637325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.07■□□□□ 0.96
PNKP-228ENST00000637325 ARHGAP31Q2M1Z3 1444 aa21.06■□□□□ 0.96
PNKP-228ENST00000637325 ROCK1Q13464 1354 aa21.05■□□□□ 0.96
PNKP-228ENST00000637325 VWDEQ8N2E2 1590 aa21.04■□□□□ 0.96
PNKP-228ENST00000637325 LMTK2Q8IWU2 1503 aa21.04■□□□□ 0.96
PNKP-228ENST00000637325 ANKLE2Q86XL3 938 aa21.03■□□□□ 0.96
PNKP-228ENST00000637325 UBR1Q8IWV7 1749 aa21■□□□□ 0.95
PNKP-228ENST00000637325 EFCAB6Q5THR3 1501 aa20.99■□□□□ 0.95
PNKP-228ENST00000637325 RRBP1Q9P2E9 1410 aaKnown RBP20.98■□□□□ 0.95
PNKP-228ENST00000637325 STAG3Q9UJ98 1225 aa20.97■□□□□ 0.95
PNKP-228ENST00000637325 UNC13BO14795 1591 aa20.97■□□□□ 0.95
PNKP-228ENST00000637325 LTBP4Q8N2S1 1624 aa20.96■□□□□ 0.95
PNKP-228ENST00000637325 TET3O43151 1660 aa20.96■□□□□ 0.95
PNKP-228ENST00000637325 GCC2Q8IWJ2 1684 aa20.96■□□□□ 0.95
PNKP-228ENST00000637325 NEURL4Q96JN8 1562 aa20.96■□□□□ 0.95
PNKP-228ENST00000637325 ZNF335Q9H4Z2 1342 aaPredicted RBP20.96■□□□□ 0.95
PNKP-228ENST00000637325 PIK3C2BO00750 1634 aa20.95■□□□□ 0.94
PNKP-228ENST00000637325 NPHP4O75161 1426 aaPredicted RBP20.93■□□□□ 0.94
PNKP-228ENST00000637325 IQGAP1P46940 1657 aa20.93■□□□□ 0.94
PNKP-228ENST00000637325 RPRD2Q5VT52 1461 aaKnown RBP20.92■□□□□ 0.94
PNKP-228ENST00000637325 SYNMO15061 1565 aa20.91■□□□□ 0.94
PNKP-228ENST00000637325 IDI1Q13907 227 aa20.91■□□□□ 0.94
PNKP-228ENST00000637325 IQGAP3Q86VI3 1631 aa20.9■□□□□ 0.94
PNKP-228ENST00000637325 MED14O60244 1454 aa20.9■□□□□ 0.94
PNKP-228ENST00000637325 NOS1P29475 1434 aa20.9■□□□□ 0.94
PNKP-228ENST00000637325 NUP155O75694 1391 aa20.9■□□□□ 0.94
PNKP-228ENST00000637325 TXNDC2Q86VQ3 553 aa20.89■□□□□ 0.93
PNKP-228ENST00000637325 SLC52A1Q9NWF4 448 aa20.89■□□□□ 0.93
PNKP-228ENST00000637325 EID1Q9Y6B2 187 aa20.89■□□□□ 0.93
PNKP-228ENST00000637325 KDM5AP29375 1690 aaKnown RBP20.89■□□□□ 0.93
PNKP-228ENST00000637325 IQSEC2Q5JU85 1478 aa20.88■□□□□ 0.93
PNKP-228ENST00000637325 E9PCH4 1651 aa20.87■□□□□ 0.93
PNKP-228ENST00000637325 SCAF11Q99590 1463 aaKnown RBP20.87■□□□□ 0.93
PNKP-228ENST00000637325 MYO5BQ9ULV0 1848 aa20.86■□□□□ 0.93
PNKP-228ENST00000637325 SLIT1O75093 1534 aa20.86■□□□□ 0.93
PNKP-228ENST00000637325 ARHGAP23Q9P227 1491 aa20.85■□□□□ 0.93
PNKP-228ENST00000637325 LTKP29376 864 aa20.84■□□□□ 0.93
PNKP-228ENST00000637325 TMEM2Q9UHN6 1383 aa20.84■□□□□ 0.93
PNKP-228ENST00000637325 ADGRB3O60242 1522 aa20.83■□□□□ 0.92
PNKP-228ENST00000637325 CPS1P31327 1500 aa20.82■□□□□ 0.92
PNKP-228ENST00000637325 NAIPQ13075 1403 aa20.8■□□□□ 0.92
PNKP-228ENST00000637325 CHGAP10645 457 aaKnown RBP20.8■□□□□ 0.92
PNKP-228ENST00000637325 UBAP1LF5GYI3 381 aa20.77■□□□□ 0.92
PNKP-228ENST00000637325 TRIM52Q96A61 297 aa20.77■□□□□ 0.92
PNKP-228ENST00000637325 SPHKAPQ2M3C7 1700 aa20.76■□□□□ 0.91
PNKP-228ENST00000637325 TMEM131LA2VDJ0 1609 aa20.76■□□□□ 0.91
PNKP-228ENST00000637325 HDGFP51858 240 aaKnown RBP20.76■□□□□ 0.91
PNKP-228ENST00000637325 BCANQ96GW7 911 aa20.76■□□□□ 0.91
PNKP-228ENST00000637325 STRCP1A6NGW2 1772 aa20.76■□□□□ 0.91
PNKP-228ENST00000637325 HFM1A2PYH4 1435 aa20.75■□□□□ 0.91
PNKP-228ENST00000637325 PPP1R15AO75807 674 aaPredicted RBP20.73■□□□□ 0.91
PNKP-228ENST00000637325 RIMS2Q9UQ26 1411 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms