RNA–Protein interactions for RNA: ENST00000637258.1

CLCN2-218, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 4

Gene CLCN2, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-218ENST00000637258 ZNF335Q9H4Z2 1342 aaPredicted RBP25.29■■□□□ 1.64
CLCN2-218ENST00000637258 CAMSAP2Q08AD1 1489 aa25.28■■□□□ 1.64
CLCN2-218ENST00000637258 WASHC2CQ9Y4E1 1318 aa25.28■■□□□ 1.64
CLCN2-218ENST00000637258 TNRQ92752 1358 aa25.26■■□□□ 1.63
CLCN2-218ENST00000637258 PZPP20742 1482 aa25.25■■□□□ 1.63
CLCN2-218ENST00000637258 FBXO31Q5XUX0 539 aaPredicted RBP25.24■■□□□ 1.63
CLCN2-218ENST00000637258 ARHGEF5Q12774 1597 aa25.23■■□□□ 1.63
CLCN2-218ENST00000637258 KDM5DQ9BY66 1539 aa25.23■■□□□ 1.63
CLCN2-218ENST00000637258 DNMT1P26358 1616 aaKnown RBP25.23■■□□□ 1.63
CLCN2-218ENST00000637258 UBAP1LF5GYI3 381 aa25.21■■□□□ 1.63
CLCN2-218ENST00000637258 THEMISQ8N1K5 641 aaPredicted RBP25.21■■□□□ 1.63
CLCN2-218ENST00000637258 VPS8Q8N3P4 1428 aa25.2■■□□□ 1.63
CLCN2-218ENST00000637258 LRRC9Q6ZRR7 1453 aa25.2■■□□□ 1.62
CLCN2-218ENST00000637258 MIA2Q96PC5 1412 aa25.2■■□□□ 1.62
CLCN2-218ENST00000637258 ANKLE2Q86XL3 938 aa25.18■■□□□ 1.62
CLCN2-218ENST00000637258 MAP3K1Q13233 1512 aa25.17■■□□□ 1.62
CLCN2-218ENST00000637258 NLRP1Q9C000 1473 aa25.16■■□□□ 1.62
CLCN2-218ENST00000637258 ILDR2Q71H61 639 aa25.16■■□□□ 1.62
CLCN2-218ENST00000637258 SOCS7O14512 581 aa25.14■■□□□ 1.62
CLCN2-218ENST00000637258 MAST1Q9Y2H9 1570 aa25.11■■□□□ 1.61
CLCN2-218ENST00000637258 LOC105371045A0A1W2PR82 267 aa25.11■■□□□ 1.61
CLCN2-218ENST00000637258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.1■■□□□ 1.61
CLCN2-218ENST00000637258 CPS1P31327 1500 aa25.1■■□□□ 1.61
CLCN2-218ENST00000637258 KANK4Q5T7N3 995 aaPredicted RBP25.09■■□□□ 1.61
CLCN2-218ENST00000637258 SPATA31D1Q6ZQQ2 1576 aa25.09■■□□□ 1.61
CLCN2-218ENST00000637258 TOM1O60784 492 aa25.08■■□□□ 1.61
CLCN2-218ENST00000637258 MYOM3Q5VTT5 1437 aa25.08■■□□□ 1.61
CLCN2-218ENST00000637258 MED14O60244 1454 aa25.08■■□□□ 1.6
CLCN2-218ENST00000637258 SHANK2Q9UPX8 1470 aa25.08■■□□□ 1.6
CLCN2-218ENST00000637258 NEURL4Q96JN8 1562 aa25.07■■□□□ 1.6
CLCN2-218ENST00000637258 UGGT1Q9NYU2 1555 aa25.07■■□□□ 1.6
CLCN2-218ENST00000637258 RNF17Q9BXT8 1623 aaKnown RBP25.06■■□□□ 1.6
CLCN2-218ENST00000637258 POLR1AO95602 1720 aaPredicted RBP25.06■■□□□ 1.6
CLCN2-218ENST00000637258 EIF2AK4Q9P2K8 1649 aaKnown RBP25.04■■□□□ 1.6
CLCN2-218ENST00000637258 NPHP4O75161 1426 aaPredicted RBP25.03■■□□□ 1.6
CLCN2-218ENST00000637258 ABCC3O15438 1527 aa25.03■■□□□ 1.6
CLCN2-218ENST00000637258 DEPDC5O75140 1603 aa25.03■■□□□ 1.6
CLCN2-218ENST00000637258 ZC3H13Q5T200 1668 aaKnown RBP25.02■■□□□ 1.6
CLCN2-218ENST00000637258 DUOX2Q9NRD8 1548 aa25■■□□□ 1.59
CLCN2-218ENST00000637258 ERVK-7P63135 1459 aa24.98■■□□□ 1.59
CLCN2-218ENST00000637258 APLP2Q06481 763 aa24.97■■□□□ 1.59
CLCN2-218ENST00000637258 VWDEQ8N2E2 1590 aa24.97■■□□□ 1.59
CLCN2-218ENST00000637258 ARHGAP31Q2M1Z3 1444 aa24.95■■□□□ 1.59
CLCN2-218ENST00000637258 HSPA1LP34931 641 aa24.94■■□□□ 1.58
CLCN2-218ENST00000637258 PIP4K2BP78356 416 aa24.94■■□□□ 1.58
CLCN2-218ENST00000637258 MROH1Q8NDA8 1641 aa24.94■■□□□ 1.58
CLCN2-218ENST00000637258 SCAF1Q9H7N4 1312 aaKnown RBP24.93■■□□□ 1.58
CLCN2-218ENST00000637258 ERBINQ96RT1 1412 aa24.93■■□□□ 1.58
CLCN2-218ENST00000637258 KIF15Q9NS87 1388 aa24.93■■□□□ 1.58
CLCN2-218ENST00000637258 ABCC5O15440 1437 aa24.92■■□□□ 1.58
CLCN2-218ENST00000637258 RRP7BPQ9NSQ0 103 aa24.9■■□□□ 1.58
CLCN2-218ENST00000637258 IQGAP1P46940 1657 aa24.9■■□□□ 1.58
CLCN2-218ENST00000637258 PRDM15P57071 1507 aaPredicted RBP24.86■■□□□ 1.57
CLCN2-218ENST00000637258 TXNDC2Q86VQ3 553 aa24.86■■□□□ 1.57
CLCN2-218ENST00000637258 SCAF11Q99590 1463 aaKnown RBP24.85■■□□□ 1.57
CLCN2-218ENST00000637258 KANK1Q14678 1352 aa24.85■■□□□ 1.57
CLCN2-218ENST00000637258 EID1Q9Y6B2 187 aa24.85■■□□□ 1.57
CLCN2-218ENST00000637258 ARHGAP23Q9P227 1491 aa24.84■■□□□ 1.57
CLCN2-218ENST00000637258 SLIT1O75093 1534 aa24.84■■□□□ 1.57
CLCN2-218ENST00000637258 DAPK1P53355 1430 aa24.84■■□□□ 1.57
CLCN2-218ENST00000637258 PTPN23Q9H3S7 1636 aa24.83■■□□□ 1.57
CLCN2-218ENST00000637258 LRRC7Q96NW7 1537 aa24.83■■□□□ 1.57
CLCN2-218ENST00000637258 LTKP29376 864 aa24.83■■□□□ 1.57
CLCN2-218ENST00000637258 CEP152O94986 1710 aa24.83■■□□□ 1.57
CLCN2-218ENST00000637258 UBR1Q8IWV7 1749 aa24.83■■□□□ 1.57
CLCN2-218ENST00000637258 ANKRD30AQ9BXX3 1397 aa24.82■■□□□ 1.56
CLCN2-218ENST00000637258 FGD6Q6ZV73 1430 aa24.82■■□□□ 1.56
CLCN2-218ENST00000637258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.82■■□□□ 1.56
CLCN2-218ENST00000637258 CFAP65Q6ZU64 1925 aaKnown RBP24.81■■□□□ 1.56
CLCN2-218ENST00000637258 CROCC2H7BZ55 1655 aa24.78■■□□□ 1.56
CLCN2-218ENST00000637258 STAG3Q9UJ98 1225 aa24.78■■□□□ 1.56
CLCN2-218ENST00000637258 SYNMO15061 1565 aa24.78■■□□□ 1.56
CLCN2-218ENST00000637258 ALKQ9UM73 1620 aa24.78■■□□□ 1.56
CLCN2-218ENST00000637258 TMEM2Q9UHN6 1383 aa24.78■■□□□ 1.56
CLCN2-218ENST00000637258 LMTK2Q8IWU2 1503 aa24.76■■□□□ 1.55
CLCN2-218ENST00000637258 STRCP1A6NGW2 1772 aa24.75■■□□□ 1.55
CLCN2-218ENST00000637258 IDI1Q13907 227 aa24.74■■□□□ 1.55
CLCN2-218ENST00000637258 MED1Q15648 1581 aaPredicted RBP24.74■■□□□ 1.55
CLCN2-218ENST00000637258 CHIC2Q9UKJ5 165 aa24.73■■□□□ 1.55
CLCN2-218ENST00000637258 SLC52A1Q9NWF4 448 aa24.72■■□□□ 1.55
CLCN2-218ENST00000637258 KDM5AP29375 1690 aaKnown RBP24.71■■□□□ 1.55
CLCN2-218ENST00000637258 NOS1P29475 1434 aa24.69■■□□□ 1.54
CLCN2-218ENST00000637258 ADGRL2O95490 1459 aa24.68■■□□□ 1.54
CLCN2-218ENST00000637258 PIK3C2BO00750 1634 aa24.68■■□□□ 1.54
CLCN2-218ENST00000637258 EFCAB6Q5THR3 1501 aa24.67■■□□□ 1.54
CLCN2-218ENST00000637258 KCNA6P17658 529 aa24.67■■□□□ 1.54
CLCN2-218ENST00000637258 PHF23Q9BUL5 403 aaPredicted RBP24.67■■□□□ 1.54
CLCN2-218ENST00000637258 RPRD2Q5VT52 1461 aaKnown RBP24.63■■□□□ 1.53
CLCN2-218ENST00000637258 FAM135BQ49AJ0 1406 aa24.62■■□□□ 1.53
CLCN2-218ENST00000637258 ANKRD50Q9ULJ7 1429 aa24.61■■□□□ 1.53
CLCN2-218ENST00000637258 HDGFP51858 240 aaKnown RBP24.61■■□□□ 1.53
CLCN2-218ENST00000637258 FAM50AQ14320 339 aaKnown RBP24.61■■□□□ 1.53
CLCN2-218ENST00000637258 TET3O43151 1660 aa24.59■■□□□ 1.53
CLCN2-218ENST00000637258 TMEM94Q12767 1356 aa24.59■■□□□ 1.53
CLCN2-218ENST00000637258 PROSER2Q86WR7 435 aaPredicted RBP24.58■■□□□ 1.53
CLCN2-218ENST00000637258 SLC26A8Q96RN1 970 aa24.57■■□□□ 1.52
CLCN2-218ENST00000637258 ADGRB3O60242 1522 aa24.56■■□□□ 1.52
CLCN2-218ENST00000637258 XIRP1Q702N8 1843 aaKnown RBP24.54■■□□□ 1.52
CLCN2-218ENST00000637258 SENP3Q9H4L4 574 aaPredicted RBP24.54■■□□□ 1.52
CLCN2-218ENST00000637258 BCANQ96GW7 911 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms