RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
LINC00643-207ENST00000637212 DIP2CQ9Y2E4 1556 aa19.66■□□□□ 0.74
LINC00643-207ENST00000637212 KANK1Q14678 1352 aa19.65■□□□□ 0.74
LINC00643-207ENST00000637212 ABCA6Q8N139 1617 aa19.65■□□□□ 0.74
LINC00643-207ENST00000637212 REREQ9P2R6 1566 aa19.64■□□□□ 0.73
LINC00643-207ENST00000637212 EIF2AK4Q9P2K8 1649 aaKnown RBP19.62■□□□□ 0.73
LINC00643-207ENST00000637212 AGLP35573 1532 aa19.62■□□□□ 0.73
LINC00643-207ENST00000637212 KDM5DQ9BY66 1539 aa19.62■□□□□ 0.73
LINC00643-207ENST00000637212 GGT6Q6P531 493 aa19.62■□□□□ 0.73
LINC00643-207ENST00000637212 PZPP20742 1482 aa19.6■□□□□ 0.73
LINC00643-207ENST00000637212 PKD2Q13563 968 aa19.6■□□□□ 0.73
LINC00643-207ENST00000637212 ARHGEF40Q8TER5 1519 aa19.6■□□□□ 0.73
LINC00643-207ENST00000637212 UNC13BO14795 1591 aa19.58■□□□□ 0.73
LINC00643-207ENST00000637212 KDM4FA0A1W2PPD8 638 aa19.58■□□□□ 0.72
LINC00643-207ENST00000637212 ZEB1P37275 1124 aaPredicted RBP19.57■□□□□ 0.72
LINC00643-207ENST00000637212 WASHC2CQ9Y4E1 1318 aa19.56■□□□□ 0.72
LINC00643-207ENST00000637212 BCORL1Q5H9F3 1711 aa19.56■□□□□ 0.72
LINC00643-207ENST00000637212 FAM135AQ9P2D6 1515 aa19.55■□□□□ 0.72
LINC00643-207ENST00000637212 ARID4BQ4LE39 1312 aaPredicted RBP19.54■□□□□ 0.72
LINC00643-207ENST00000637212 DEPDC5O75140 1603 aa19.54■□□□□ 0.72
LINC00643-207ENST00000637212 VWDEQ8N2E2 1590 aa19.53■□□□□ 0.72
LINC00643-207ENST00000637212 RNF17Q9BXT8 1623 aaKnown RBP19.53■□□□□ 0.72
LINC00643-207ENST00000637212 PRDM15P57071 1507 aaPredicted RBP19.52■□□□□ 0.72
LINC00643-207ENST00000637212 ANKRD30BQ9BXX2 1392 aa19.52■□□□□ 0.72
LINC00643-207ENST00000637212 LMTK2Q8IWU2 1503 aa19.51■□□□□ 0.71
LINC00643-207ENST00000637212 FOXD1Q16676 465 aa19.51■□□□□ 0.71
LINC00643-207ENST00000637212 IQGAP3Q86VI3 1631 aa19.51■□□□□ 0.71
LINC00643-207ENST00000637212 MROH1Q8NDA8 1641 aa19.5■□□□□ 0.71
LINC00643-207ENST00000637212 TIMELESSQ9UNS1 1208 aa19.49■□□□□ 0.71
LINC00643-207ENST00000637212 MLECQ14165 292 aa19.47■□□□□ 0.71
LINC00643-207ENST00000637212 ESF1Q9H501 851 aaKnown RBP19.47■□□□□ 0.71
LINC00643-207ENST00000637212 ARHGAP31Q2M1Z3 1444 aa19.45■□□□□ 0.7
LINC00643-207ENST00000637212 SIN3AQ96ST3 1273 aa19.45■□□□□ 0.7
LINC00643-207ENST00000637212 ABCC3O15438 1527 aa19.44■□□□□ 0.7
LINC00643-207ENST00000637212 NEUROD1Q13562 356 aa19.43■□□□□ 0.7
LINC00643-207ENST00000637212 PTPRTO14522 1441 aa19.42■□□□□ 0.7
LINC00643-207ENST00000637212 RPRD2Q5VT52 1461 aaKnown RBP19.42■□□□□ 0.7
LINC00643-207ENST00000637212 CNTLNQ9NXG0 1405 aa19.42■□□□□ 0.7
LINC00643-207ENST00000637212 TET3O43151 1660 aa19.4■□□□□ 0.7
LINC00643-207ENST00000637212 SENP3Q9H4L4 574 aaPredicted RBP19.4■□□□□ 0.7
LINC00643-207ENST00000637212 PLA2R1Q13018 1463 aa19.4■□□□□ 0.7
LINC00643-207ENST00000637212 NPATQ14207 1427 aa19.39■□□□□ 0.69
LINC00643-207ENST00000637212 ZMYM3Q14202 1370 aa19.38■□□□□ 0.69
LINC00643-207ENST00000637212 EFCAB6Q5THR3 1501 aa19.38■□□□□ 0.69
LINC00643-207ENST00000637212 SIGLEC1Q9BZZ2 1709 aa19.38■□□□□ 0.69
LINC00643-207ENST00000637212 ZC3H13Q5T200 1668 aaKnown RBP19.36■□□□□ 0.69
LINC00643-207ENST00000637212 CCDC144AA2RUR9 1427 aa19.35■□□□□ 0.69
LINC00643-207ENST00000637212 NOS1P29475 1434 aa19.34■□□□□ 0.69
LINC00643-207ENST00000637212 SLC52A1Q9NWF4 448 aa19.33■□□□□ 0.68
LINC00643-207ENST00000637212 TONSLQ96HA7 1378 aa19.32■□□□□ 0.68
LINC00643-207ENST00000637212 E9PCH4 1651 aa19.31■□□□□ 0.68
LINC00643-207ENST00000637212 FBXO31Q5XUX0 539 aaPredicted RBP19.31■□□□□ 0.68
LINC00643-207ENST00000637212 TRPM2O94759 1503 aa19.3■□□□□ 0.68
LINC00643-207ENST00000637212 CAMSAP1Q5T5Y3 1602 aa19.29■□□□□ 0.68
LINC00643-207ENST00000637212 CEP152O94986 1710 aa19.28■□□□□ 0.68
LINC00643-207ENST00000637212 PPP1R15AO75807 674 aaPredicted RBP19.28■□□□□ 0.68
LINC00643-207ENST00000637212 L3MBTL2Q969R5 705 aa19.28■□□□□ 0.68
LINC00643-207ENST00000637212 STAC3Q96MF2 364 aa19.27■□□□□ 0.68
LINC00643-207ENST00000637212 IDI1Q13907 227 aa19.26■□□□□ 0.67
LINC00643-207ENST00000637212 ERVK-7P63135 1459 aa19.25■□□□□ 0.67
LINC00643-207ENST00000637212 CLTCQ00610 1675 aaKnown RBP19.24■□□□□ 0.67
LINC00643-207ENST00000637212 CEBPAP49715 358 aaPredicted RBP19.23■□□□□ 0.67
LINC00643-207ENST00000637212 SPATA31E1Q6ZUB1 1445 aa19.22■□□□□ 0.67
LINC00643-207ENST00000637212 MROH2AA6NES4 1674 aa19.21■□□□□ 0.67
LINC00643-207ENST00000637212 ADAMTSL3P82987 1691 aa19.21■□□□□ 0.67
LINC00643-207ENST00000637212 RGL3Q3MIN7 710 aa19.21■□□□□ 0.67
LINC00643-207ENST00000637212 SPATA31D1Q6ZQQ2 1576 aa19.21■□□□□ 0.67
LINC00643-207ENST00000637212 RPGRIP1LQ68CZ1 1315 aa19.21■□□□□ 0.67
LINC00643-207ENST00000637212 TNRQ92752 1358 aa19.2■□□□□ 0.66
LINC00643-207ENST00000637212 SPHKAPQ2M3C7 1700 aa19.2■□□□□ 0.66
LINC00643-207ENST00000637212 DCAF11Q8TEB1 546 aa19.19■□□□□ 0.66
LINC00643-207ENST00000637212 NEURL4Q96JN8 1562 aa19.19■□□□□ 0.66
LINC00643-207ENST00000637212 CHGAP10645 457 aaKnown RBP19.18■□□□□ 0.66
LINC00643-207ENST00000637212 SYNMO15061 1565 aa19.17■□□□□ 0.66
LINC00643-207ENST00000637212 CLTCL1P53675 1640 aa19.16■□□□□ 0.66
LINC00643-207ENST00000637212 PREX1Q8TCU6 1659 aa19.15■□□□□ 0.66
LINC00643-207ENST00000637212 STAG3Q9UJ98 1225 aa19.15■□□□□ 0.66
LINC00643-207ENST00000637212 ZNF326Q5BKZ1 582 aaKnown RBP19.14■□□□□ 0.65
LINC00643-207ENST00000637212 KDM2AQ9Y2K7 1162 aa19.14■□□□□ 0.65
LINC00643-207ENST00000637212 UGGT1Q9NYU2 1555 aa19.14■□□□□ 0.65
LINC00643-207ENST00000637212 MADDQ8WXG6 1647 aa19.14■□□□□ 0.65
LINC00643-207ENST00000637212 NLRP1Q9C000 1473 aa19.13■□□□□ 0.65
LINC00643-207ENST00000637212 PIK3C2BO00750 1634 aa19.13■□□□□ 0.65
LINC00643-207ENST00000637212 FER1L4A9Z1Z3 1794 aa19.13■□□□□ 0.65
LINC00643-207ENST00000637212 PHF23Q9BUL5 403 aaPredicted RBP19.12■□□□□ 0.65
LINC00643-207ENST00000637212 PTPRMP28827 1452 aa19.11■□□□□ 0.65
LINC00643-207ENST00000637212 UHRF1BP1Q6BDS2 1440 aa19.11■□□□□ 0.65
LINC00643-207ENST00000637212 VGFO15240 615 aaPredicted RBP19.11■□□□□ 0.65
LINC00643-207ENST00000637212 HDGFP51858 240 aaKnown RBP19.11■□□□□ 0.65
LINC00643-207ENST00000637212 PLPPR3Q6T4P5 718 aa19.1■□□□□ 0.65
LINC00643-207ENST00000637212 NBPF8Q3BBV2 869 aa19.09■□□□□ 0.65
LINC00643-207ENST00000637212 ADGRB3O60242 1522 aa19.09■□□□□ 0.65
LINC00643-207ENST00000637212 C3P01024 1663 aa19.08■□□□□ 0.65
LINC00643-207ENST00000637212 RIMS1Q86UR5 1692 aaKnown RBP19.08■□□□□ 0.65
LINC00643-207ENST00000637212 THEMISQ8N1K5 641 aaPredicted RBP19.08■□□□□ 0.64
LINC00643-207ENST00000637212 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.08■□□□□ 0.64
LINC00643-207ENST00000637212 A2ML1A8K2U0 1454 aa19.06■□□□□ 0.64
LINC00643-207ENST00000637212 ZFYVE9O95405 1425 aa19.06■□□□□ 0.64
LINC00643-207ENST00000637212 CFAP65Q6ZU64 1925 aaKnown RBP19.06■□□□□ 0.64
LINC00643-207ENST00000637212 TMEM131LA2VDJ0 1609 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms