RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 HNRNPMP52272 730 aaKnown RBP eCLIP14.99□□□□□ -0.01
CACNA1A-236ENST00000637117 IQSEC2Q5JU85 1478 aa14.99□□□□□ -0.01
CACNA1A-236ENST00000637117 CCDC18Q5T9S5 1454 aa14.99□□□□□ -0.01
CACNA1A-236ENST00000637117 ITSN2Q9NZM3 1697 aa14.99□□□□□ -0.01
CACNA1A-236ENST00000637117 NPATQ14207 1427 aa14.98□□□□□ -0.01
CACNA1A-236ENST00000637117 CAMSAP1Q5T5Y3 1602 aa14.96□□□□□ -0.01
CACNA1A-236ENST00000637117 ZNF335Q9H4Z2 1342 aaPredicted RBP14.95□□□□□ -0.02
CACNA1A-236ENST00000637117 CDC42BPAQ5VT25 1732 aa14.95□□□□□ -0.02
CACNA1A-236ENST00000637117 SPATA31D1Q6ZQQ2 1576 aa14.95□□□□□ -0.02
CACNA1A-236ENST00000637117 SAMD9LQ8IVG5 1584 aa14.95□□□□□ -0.02
CACNA1A-236ENST00000637117 PKD2Q13563 968 aa14.95□□□□□ -0.02
CACNA1A-236ENST00000637117 UBAP1LF5GYI3 381 aa14.94□□□□□ -0.02
CACNA1A-236ENST00000637117 GGT6Q6P531 493 aa14.94□□□□□ -0.02
CACNA1A-236ENST00000637117 IFNLR1Q8IU57 520 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-236ENST00000637117 GPATCH8Q9UKJ3 1502 aaKnown RBP14.93□□□□□ -0.02
CACNA1A-236ENST00000637117 DSG3P32926 999 aa14.93□□□□□ -0.02
CACNA1A-236ENST00000637117 CFDP1Q9UEE9 299 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-236ENST00000637117 MROH2AA6NES4 1674 aa14.93□□□□□ -0.02
CACNA1A-236ENST00000637117 SUPT6HQ7KZ85 1726 aaKnown RBP14.92□□□□□ -0.02
CACNA1A-236ENST00000637117 SYCP2Q9BX26 1530 aa14.91□□□□□ -0.02
CACNA1A-236ENST00000637117 KIAA1107Q9UPP5 1409 aa14.91□□□□□ -0.02
CACNA1A-236ENST00000637117 A2MP01023 1474 aa14.9□□□□□ -0.02
CACNA1A-236ENST00000637117 PTPRKQ15262 1439 aa14.89□□□□□ -0.03
CACNA1A-236ENST00000637117 FYCO1Q9BQS8 1478 aa14.89□□□□□ -0.03
CACNA1A-236ENST00000637117 CCNB3Q8WWL7 1395 aa14.88□□□□□ -0.03
CACNA1A-236ENST00000637117 ATP7AQ04656 1500 aa14.88□□□□□ -0.03
CACNA1A-236ENST00000637117 CLTCQ00610 1675 aaKnown RBP14.88□□□□□ -0.03
CACNA1A-236ENST00000637117 PLA2R1Q13018 1463 aa14.88□□□□□ -0.03
CACNA1A-236ENST00000637117 PLEKHH2Q8IVE3 1493 aa14.88□□□□□ -0.03
CACNA1A-236ENST00000637117 TCOF1Q13428 1488 aaKnown RBP14.86□□□□□ -0.03
CACNA1A-236ENST00000637117 PLXNC1O60486 1568 aa14.85□□□□□ -0.03
CACNA1A-236ENST00000637117 ZNF692Q9BU19 519 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-236ENST00000637117 CEP170BQ9Y4F5 1589 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-236ENST00000637117 ZNF644Q9H582 1327 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-236ENST00000637117 MYO3AQ8NEV4 1616 aa14.84□□□□□ -0.03
CACNA1A-236ENST00000637117 ZNF142P52746 1687 aaPredicted RBP14.83□□□□□ -0.04
CACNA1A-236ENST00000637117 MTUS2Q5JR59 1369 aa14.83□□□□□ -0.04
CACNA1A-236ENST00000637117 INO80Q9ULG1 1556 aaPredicted RBP14.82□□□□□ -0.04
CACNA1A-236ENST00000637117 TOM1O60784 492 aa14.81□□□□□ -0.04
CACNA1A-236ENST00000637117 PIP4K2BP78356 416 aa14.81□□□□□ -0.04
CACNA1A-236ENST00000637117 FBXO31Q5XUX0 539 aaPredicted RBP14.81□□□□□ -0.04
CACNA1A-236ENST00000637117 A2ML1A8K2U0 1454 aa14.81□□□□□ -0.04
CACNA1A-236ENST00000637117 HSPA1LP34931 641 aa14.8□□□□□ -0.04
CACNA1A-236ENST00000637117 DHX29Q7Z478 1369 aaKnown RBP14.8□□□□□ -0.04
CACNA1A-236ENST00000637117 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
CACNA1A-236ENST00000637117 KIF3BO15066 747 aa14.79□□□□□ -0.04
CACNA1A-236ENST00000637117 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
CACNA1A-236ENST00000637117 SPDYE2Q495Y8 402 aa14.79□□□□□ -0.04
CACNA1A-236ENST00000637117 ADGBQ8N7X0 1667 aa14.78□□□□□ -0.04
CACNA1A-236ENST00000637117 DNMT1P26358 1616 aaKnown RBP14.78□□□□□ -0.04
CACNA1A-236ENST00000637117 MBD5Q9P267 1494 aa14.78□□□□□ -0.04
CACNA1A-236ENST00000637117 RTEL1-TNFRSF6BF6WH68 1400 aa14.78□□□□□ -0.04
CACNA1A-236ENST00000637117 ANKLE2Q86XL3 938 aa14.77□□□□□ -0.05
CACNA1A-236ENST00000637117 TNRQ92752 1358 aa14.76□□□□□ -0.05
CACNA1A-236ENST00000637117 WASHC2CQ9Y4E1 1318 aa14.76□□□□□ -0.05
CACNA1A-236ENST00000637117 THEMISQ8N1K5 641 aaPredicted RBP14.76□□□□□ -0.05
CACNA1A-236ENST00000637117 SSUH2Q9Y2M2 353 aa14.76□□□□□ -0.05
CACNA1A-236ENST00000637117 RSPH4AQ5TD94 716 aa14.75□□□□□ -0.05
CACNA1A-236ENST00000637117 SHANK2Q9UPX8 1470 aa14.75□□□□□ -0.05
CACNA1A-236ENST00000637117 CPS1P31327 1500 aa14.74□□□□□ -0.05
CACNA1A-236ENST00000637117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.73□□□□□ -0.05
CACNA1A-236ENST00000637117 TIAM1Q13009 1591 aa14.73□□□□□ -0.05
CACNA1A-236ENST00000637117 PZPP20742 1482 aa14.71□□□□□ -0.05
CACNA1A-236ENST00000637117 CEP162Q5TB80 1403 aa14.71□□□□□ -0.05
CACNA1A-236ENST00000637117 MIA2Q96PC5 1412 aa14.71□□□□□ -0.05
CACNA1A-236ENST00000637117 NEURL4Q96JN8 1562 aa14.7□□□□□ -0.06
CACNA1A-236ENST00000637117 STAG3Q9UJ98 1225 aa14.7□□□□□ -0.06
CACNA1A-236ENST00000637117 TSPY4P0CV99 314 aa14.69□□□□□ -0.06
CACNA1A-236ENST00000637117 TSPY10P0CW01 314 aa14.69□□□□□ -0.06
CACNA1A-236ENST00000637117 POLR1AO95602 1720 aaPredicted RBP14.69□□□□□ -0.06
CACNA1A-236ENST00000637117 MED1Q15648 1581 aaPredicted RBP14.68□□□□□ -0.06
CACNA1A-236ENST00000637117 EHBP1L1Q8N3D4 1523 aa14.68□□□□□ -0.06
CACNA1A-236ENST00000637117 KDM5DQ9BY66 1539 aa14.68□□□□□ -0.06
CACNA1A-236ENST00000637117 KLHL34Q8N239 644 aa14.68□□□□□ -0.06
CACNA1A-236ENST00000637117 CCDC141Q6ZP82 1450 aa14.68□□□□□ -0.06
CACNA1A-236ENST00000637117 NPHP4O75161 1426 aaPredicted RBP14.67□□□□□ -0.06
CACNA1A-236ENST00000637117 NLRP1Q9C000 1473 aa14.67□□□□□ -0.06
CACNA1A-236ENST00000637117 FAM135AQ9P2D6 1515 aa14.66□□□□□ -0.06
CACNA1A-236ENST00000637117 VWDEQ8N2E2 1590 aa14.66□□□□□ -0.06
CACNA1A-236ENST00000637117 UGGT1Q9NYU2 1555 aa14.66□□□□□ -0.06
CACNA1A-236ENST00000637117 MED14O60244 1454 aa14.66□□□□□ -0.06
CACNA1A-236ENST00000637117 SPOCK2Q92563 424 aa14.65□□□□□ -0.06
CACNA1A-236ENST00000637117 CAMSAP2Q08AD1 1489 aa14.64□□□□□ -0.07
CACNA1A-236ENST00000637117 PLCB2Q00722 1185 aa14.64□□□□□ -0.07
CACNA1A-236ENST00000637117 NCOA2Q15596 1464 aa14.63□□□□□ -0.07
CACNA1A-236ENST00000637117 DEPDC5O75140 1603 aa14.63□□□□□ -0.07
CACNA1A-236ENST00000637117 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
CACNA1A-236ENST00000637117 ALKQ9UM73 1620 aa14.61□□□□□ -0.07
CACNA1A-236ENST00000637117 LRRC7Q96NW7 1537 aa14.6□□□□□ -0.07
CACNA1A-236ENST00000637117 IQGAP1P46940 1657 aa14.59□□□□□ -0.07
CACNA1A-236ENST00000637117 ARHGEF5Q12774 1597 aa14.59□□□□□ -0.07
CACNA1A-236ENST00000637117 TXNDC2Q86VQ3 553 aa14.57□□□□□ -0.08
CACNA1A-236ENST00000637117 STRCP1A6NGW2 1772 aa14.57□□□□□ -0.08
CACNA1A-236ENST00000637117 ABCC3O15438 1527 aa14.56□□□□□ -0.08
CACNA1A-236ENST00000637117 LTKP29376 864 aa14.56□□□□□ -0.08
CACNA1A-236ENST00000637117 ERVK-7P63135 1459 aa14.56□□□□□ -0.08
CACNA1A-236ENST00000637117 CFAP65Q6ZU64 1925 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-236ENST00000637117 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-236ENST00000637117 RNF17Q9BXT8 1623 aaKnown RBP14.54□□□□□ -0.08
CACNA1A-236ENST00000637117 MIER1Q8N108 512 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms