RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 DCAF11Q8TEB1 546 aa16.68■□□□□ 0.26
CLN8-212ENST00000637083 HNRNPUQ00839 825 aaKnown RBP eCLIP16.67■□□□□ 0.26
CLN8-212ENST00000637083 RTEL1-TNFRSF6BF6WH68 1400 aa16.67■□□□□ 0.26
CLN8-212ENST00000637083 MAGI2Q86UL8 1455 aa16.67■□□□□ 0.26
CLN8-212ENST00000637083 ATP10AO60312 1499 aa16.65■□□□□ 0.26
CLN8-212ENST00000637083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLN8-212ENST00000637083 OSCARQ8IYS5 282 aa16.64■□□□□ 0.25
CLN8-212ENST00000637083 KDM2AQ9Y2K7 1162 aa16.64■□□□□ 0.25
CLN8-212ENST00000637083 FKBP8Q14318 412 aa16.63■□□□□ 0.25
CLN8-212ENST00000637083 MRS2Q9HD23 443 aa16.63■□□□□ 0.25
CLN8-212ENST00000637083 WDR7Q9Y4E6 1490 aa16.63■□□□□ 0.25
CLN8-212ENST00000637083 BCORL1Q5H9F3 1711 aa16.62■□□□□ 0.25
CLN8-212ENST00000637083 TRAPPC8Q9Y2L5 1435 aa16.62■□□□□ 0.25
CLN8-212ENST00000637083 SPAG9O60271 1321 aaKnown RBP16.61■□□□□ 0.25
CLN8-212ENST00000637083 AFAP1Q8N556 730 aa16.61■□□□□ 0.25
CLN8-212ENST00000637083 PRAG1Q86YV5 1406 aa16.61■□□□□ 0.25
CLN8-212ENST00000637083 EIF2AK4Q9P2K8 1649 aaKnown RBP16.59■□□□□ 0.25
CLN8-212ENST00000637083 PLA2R1Q13018 1463 aa16.59■□□□□ 0.25
CLN8-212ENST00000637083 DHX29Q7Z478 1369 aaKnown RBP16.59■□□□□ 0.25
CLN8-212ENST00000637083 TRPM1Q7Z4N2 1603 aa16.58■□□□□ 0.25
CLN8-212ENST00000637083 KTN1Q86UP2 1357 aaKnown RBP16.58■□□□□ 0.24
CLN8-212ENST00000637083 POLR3GLQ9BT43 218 aa16.58■□□□□ 0.24
CLN8-212ENST00000637083 LAMC1P11047 1609 aa16.57■□□□□ 0.24
CLN8-212ENST00000637083 ST20-MTHFSA0A0A6YYL1 179 aa16.57■□□□□ 0.24
CLN8-212ENST00000637083 ABCA9Q8IUA7 1624 aa16.56■□□□□ 0.24
CLN8-212ENST00000637083 GPRASP1Q5JY77 1395 aa16.56■□□□□ 0.24
CLN8-212ENST00000637083 FAM9BQ8IZU0 186 aa16.56■□□□□ 0.24
CLN8-212ENST00000637083 STAC3Q96MF2 364 aa16.56■□□□□ 0.24
CLN8-212ENST00000637083 ZFYVE16Q7Z3T8 1539 aa16.56■□□□□ 0.24
CLN8-212ENST00000637083 FANCAO15360 1455 aa16.55■□□□□ 0.24
CLN8-212ENST00000637083 A2MP01023 1474 aa16.55■□□□□ 0.24
CLN8-212ENST00000637083 ZBED9Q6R2W3 1325 aa16.55■□□□□ 0.24
CLN8-212ENST00000637083 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
CLN8-212ENST00000637083 CCDC184Q52MB2 194 aa16.54■□□□□ 0.24
CLN8-212ENST00000637083 KANK1Q14678 1352 aa16.54■□□□□ 0.24
CLN8-212ENST00000637083 ASXL2Q76L83 1435 aa16.53■□□□□ 0.24
CLN8-212ENST00000637083 ERICH6BQ5W0A0 696 aa16.52■□□□□ 0.24
CLN8-212ENST00000637083 NPM1P06748 294 aaKnown RBP eCLIP16.52■□□□□ 0.23
CLN8-212ENST00000637083 ATP7AQ04656 1500 aa16.51■□□□□ 0.23
CLN8-212ENST00000637083 RALBP1Q15311 655 aa16.51■□□□□ 0.23
CLN8-212ENST00000637083 DEPDC5O75140 1603 aa16.51■□□□□ 0.23
CLN8-212ENST00000637083 INO80Q9ULG1 1556 aaPredicted RBP16.5■□□□□ 0.23
CLN8-212ENST00000637083 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
CLN8-212ENST00000637083 ADGRL1O94910 1474 aa16.5■□□□□ 0.23
CLN8-212ENST00000637083 TRPM2O94759 1503 aa16.49■□□□□ 0.23
CLN8-212ENST00000637083 BCANQ96GW7 911 aa16.48■□□□□ 0.23
CLN8-212ENST00000637083 SCAPERQ9BY12 1400 aa16.48■□□□□ 0.23
CLN8-212ENST00000637083 TET3O43151 1660 aa16.47■□□□□ 0.23
CLN8-212ENST00000637083 E9PCH4 1651 aa16.47■□□□□ 0.23
CLN8-212ENST00000637083 PTPRTO14522 1441 aa16.47■□□□□ 0.23
CLN8-212ENST00000637083 TMC1Q8TDI8 760 aa16.46■□□□□ 0.23
CLN8-212ENST00000637083 MYT1LQ9UL68 1186 aa16.46■□□□□ 0.23
CLN8-212ENST00000637083 MYBBP1AQ9BQG0 1328 aaKnown RBP16.46■□□□□ 0.22
CLN8-212ENST00000637083 WASHC2CQ9Y4E1 1318 aa16.46■□□□□ 0.22
CLN8-212ENST00000637083 BRD4O60885 1362 aaPredicted RBP16.45■□□□□ 0.22
CLN8-212ENST00000637083 NBPF1Q3BBV0 1214 aa16.45■□□□□ 0.22
CLN8-212ENST00000637083 VWDEQ8N2E2 1590 aa16.44■□□□□ 0.22
CLN8-212ENST00000637083 SPHKAPQ2M3C7 1700 aa16.44■□□□□ 0.22
CLN8-212ENST00000637083 TMF1P82094 1093 aa16.44■□□□□ 0.22
CLN8-212ENST00000637083 NEURL4Q96JN8 1562 aa16.44■□□□□ 0.22
CLN8-212ENST00000637083 CFAP74Q9C0B2 1584 aa16.44■□□□□ 0.22
CLN8-212ENST00000637083 COL17A1Q9UMD9 1497 aaPredicted RBP16.44■□□□□ 0.22
CLN8-212ENST00000637083 CEP152O94986 1710 aa16.43■□□□□ 0.22
CLN8-212ENST00000637083 RNF17Q9BXT8 1623 aaKnown RBP16.43■□□□□ 0.22
CLN8-212ENST00000637083 KIF3BO15066 747 aa16.42■□□□□ 0.22
CLN8-212ENST00000637083 ZNF518AQ6AHZ1 1483 aa16.41■□□□□ 0.22
CLN8-212ENST00000637083 PNISRQ8TF01 805 aaKnown RBP16.41■□□□□ 0.22
CLN8-212ENST00000637083 TESK2Q96S53 571 aa16.4■□□□□ 0.22
CLN8-212ENST00000637083 TSHZ2Q9NRE2 1034 aa16.4■□□□□ 0.22
CLN8-212ENST00000637083 MADDQ8WXG6 1647 aa16.39■□□□□ 0.21
CLN8-212ENST00000637083 SLC24A1O60721 1099 aa16.38■□□□□ 0.21
CLN8-212ENST00000637083 CDCA8Q53HL2 280 aa16.38■□□□□ 0.21
CLN8-212ENST00000637083 CLTCL1P53675 1640 aa16.38■□□□□ 0.21
CLN8-212ENST00000637083 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
CLN8-212ENST00000637083 CD109Q6YHK3 1445 aa16.38■□□□□ 0.21
CLN8-212ENST00000637083 SMG6Q86US8 1419 aaKnown RBP16.38■□□□□ 0.21
CLN8-212ENST00000637083 PARD3Q8TEW0 1356 aa16.37■□□□□ 0.21
CLN8-212ENST00000637083 NLRP13Q86W25 1043 aa16.37■□□□□ 0.21
CLN8-212ENST00000637083 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
CLN8-212ENST00000637083 LMTK2Q8IWU2 1503 aa16.36■□□□□ 0.21
CLN8-212ENST00000637083 EIF3AQ14152 1382 aaKnown RBP16.35■□□□□ 0.21
CLN8-212ENST00000637083 SCAF11Q99590 1463 aaKnown RBP16.35■□□□□ 0.21
CLN8-212ENST00000637083 KIAA1210Q9ULL0 1709 aa16.35■□□□□ 0.21
CLN8-212ENST00000637083 DISP3Q9P2K9 1392 aa16.35■□□□□ 0.21
CLN8-212ENST00000637083 PER1O15534 1290 aaPredicted RBP16.35■□□□□ 0.21
CLN8-212ENST00000637083 PPP4R2Q9NY27 417 aa16.35■□□□□ 0.21
CLN8-212ENST00000637083 KIDINS220Q9ULH0 1771 aa16.35■□□□□ 0.21
CLN8-212ENST00000637083 NUDCQ9Y266 331 aa16.34■□□□□ 0.21
CLN8-212ENST00000637083 IQGAP1P46940 1657 aa16.34■□□□□ 0.21
CLN8-212ENST00000637083 RIMBP3CA6NJZ7 1639 aa16.34■□□□□ 0.21
CLN8-212ENST00000637083 RIMBP3BA6NNM3 1639 aa16.34■□□□□ 0.21
CLN8-212ENST00000637083 MROH1Q8NDA8 1641 aa16.34■□□□□ 0.21
CLN8-212ENST00000637083 RIMBP3Q9UFD9 1639 aa16.34■□□□□ 0.21
CLN8-212ENST00000637083 EFCAB6Q5THR3 1501 aa16.33■□□□□ 0.21
CLN8-212ENST00000637083 MLH3Q9UHC1 1453 aa16.33■□□□□ 0.2
CLN8-212ENST00000637083 MYOM2P54296 1465 aa16.32■□□□□ 0.2
CLN8-212ENST00000637083 POGZQ7Z3K3 1410 aa16.32■□□□□ 0.2
CLN8-212ENST00000637083 INSRP06213 1382 aa16.32■□□□□ 0.2
CLN8-212ENST00000637083 PANK3Q9H999 370 aa16.3■□□□□ 0.2
CLN8-212ENST00000637083 KIF1BO60333 1816 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms