RNA–Protein interactions for RNA: ENST00000636903.1

SMARCA2-254, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-254ENST00000636903 UNC13BO14795 1591 aa19.52■□□□□ 0.72
SMARCA2-254ENST00000636903 MYT1Q01538 1121 aa19.51■□□□□ 0.71
SMARCA2-254ENST00000636903 RGL3Q3MIN7 710 aa19.51■□□□□ 0.71
SMARCA2-254ENST00000636903 KDM2AQ9Y2K7 1162 aa19.51■□□□□ 0.71
SMARCA2-254ENST00000636903 DHX29Q7Z478 1369 aaKnown RBP19.5■□□□□ 0.71
SMARCA2-254ENST00000636903 GGT6Q6P531 493 aa19.5■□□□□ 0.71
SMARCA2-254ENST00000636903 TEX14Q8IWB6 1497 aa19.5■□□□□ 0.71
SMARCA2-254ENST00000636903 NEO1Q92859 1461 aa19.5■□□□□ 0.71
SMARCA2-254ENST00000636903 PLA2R1Q13018 1463 aa19.49■□□□□ 0.71
SMARCA2-254ENST00000636903 CFAP74Q9C0B2 1584 aa19.48■□□□□ 0.71
SMARCA2-254ENST00000636903 YEATS2Q9ULM3 1422 aa19.47■□□□□ 0.71
SMARCA2-254ENST00000636903 GLI2P10070 1586 aa19.47■□□□□ 0.71
SMARCA2-254ENST00000636903 KDM5CP41229 1560 aa19.47■□□□□ 0.71
SMARCA2-254ENST00000636903 IQGAP3Q86VI3 1631 aa19.46■□□□□ 0.71
SMARCA2-254ENST00000636903 A2MP01023 1474 aa19.45■□□□□ 0.7
SMARCA2-254ENST00000636903 MAGI2Q86UL8 1455 aa19.45■□□□□ 0.7
SMARCA2-254ENST00000636903 PPRC1Q5VV67 1664 aaKnown RBP19.45■□□□□ 0.7
SMARCA2-254ENST00000636903 ABCA6Q8N139 1617 aa19.44■□□□□ 0.7
SMARCA2-254ENST00000636903 HECW2Q9P2P5 1572 aa19.44■□□□□ 0.7
SMARCA2-254ENST00000636903 FRMPD1Q5SYB0 1578 aa19.43■□□□□ 0.7
SMARCA2-254ENST00000636903 MIER1Q8N108 512 aa19.43■□□□□ 0.7
SMARCA2-254ENST00000636903 DCAF11Q8TEB1 546 aa19.43■□□□□ 0.7
SMARCA2-254ENST00000636903 MLH3Q9UHC1 1453 aa19.43■□□□□ 0.7
SMARCA2-254ENST00000636903 KIF13AQ9H1H9 1805 aa19.43■□□□□ 0.7
SMARCA2-254ENST00000636903 RICTORQ6R327 1708 aa19.42■□□□□ 0.7
SMARCA2-254ENST00000636903 CCDC144AA2RUR9 1427 aa19.41■□□□□ 0.7
SMARCA2-254ENST00000636903 COL17A1Q9UMD9 1497 aaPredicted RBP19.41■□□□□ 0.7
SMARCA2-254ENST00000636903 MROH1Q8NDA8 1641 aa19.4■□□□□ 0.7
SMARCA2-254ENST00000636903 CFAP65Q6ZU64 1925 aaKnown RBP19.39■□□□□ 0.69
SMARCA2-254ENST00000636903 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
SMARCA2-254ENST00000636903 E9PCH4 1651 aa19.39■□□□□ 0.69
SMARCA2-254ENST00000636903 HSPA5P11021 654 aaKnown RBP19.39■□□□□ 0.69
SMARCA2-254ENST00000636903 DEPDC5O75140 1603 aa19.37■□□□□ 0.69
SMARCA2-254ENST00000636903 KANK1Q14678 1352 aa19.37■□□□□ 0.69
SMARCA2-254ENST00000636903 DIP2CQ9Y2E4 1556 aa19.36■□□□□ 0.69
SMARCA2-254ENST00000636903 TRHP20396 242 aaPredicted RBP19.35■□□□□ 0.69
SMARCA2-254ENST00000636903 ATP10AO60312 1499 aa19.34■□□□□ 0.69
SMARCA2-254ENST00000636903 WASHC2CQ9Y4E1 1318 aa19.34■□□□□ 0.69
SMARCA2-254ENST00000636903 UGGT1Q9NYU2 1555 aa19.34■□□□□ 0.69
SMARCA2-254ENST00000636903 PRDM15P57071 1507 aaPredicted RBP19.33■□□□□ 0.68
SMARCA2-254ENST00000636903 CEP152O94986 1710 aa19.33■□□□□ 0.68
SMARCA2-254ENST00000636903 MLECQ14165 292 aa19.32■□□□□ 0.68
SMARCA2-254ENST00000636903 VWDEQ8N2E2 1590 aa19.32■□□□□ 0.68
SMARCA2-254ENST00000636903 EIF2AK4Q9P2K8 1649 aaKnown RBP19.31■□□□□ 0.68
SMARCA2-254ENST00000636903 C11orf95C9JLR9 678 aaPredicted RBP19.3■□□□□ 0.68
SMARCA2-254ENST00000636903 EIF4G2P78344 907 aaKnown RBP eCLIP19.3■□□□□ 0.684e-7■■■■□ 19.9
SMARCA2-254ENST00000636903 TET3O43151 1660 aa19.29■□□□□ 0.68
SMARCA2-254ENST00000636903 NBPF1Q3BBV0 1214 aa19.28■□□□□ 0.68
SMARCA2-254ENST00000636903 CHGAP10645 457 aaKnown RBP19.26■□□□□ 0.67
SMARCA2-254ENST00000636903 SENP3Q9H4L4 574 aaPredicted RBP19.26■□□□□ 0.67
SMARCA2-254ENST00000636903 CLTCL1P53675 1640 aa19.26■□□□□ 0.67
SMARCA2-254ENST00000636903 NPATQ14207 1427 aa19.25■□□□□ 0.67
SMARCA2-254ENST00000636903 RNF17Q9BXT8 1623 aaKnown RBP19.25■□□□□ 0.67
SMARCA2-254ENST00000636903 SPHKAPQ2M3C7 1700 aa19.25■□□□□ 0.67
SMARCA2-254ENST00000636903 SIGLEC1Q9BZZ2 1709 aa19.24■□□□□ 0.67
SMARCA2-254ENST00000636903 EFCAB6Q5THR3 1501 aa19.24■□□□□ 0.67
SMARCA2-254ENST00000636903 PTPRTO14522 1441 aa19.24■□□□□ 0.67
SMARCA2-254ENST00000636903 WASHC2AQ641Q2 1341 aa19.24■□□□□ 0.67
SMARCA2-254ENST00000636903 CARD11Q9BXL7 1154 aa19.24■□□□□ 0.67
SMARCA2-254ENST00000636903 YTHDC1Q96MU7 727 aaKnown RBP19.23■□□□□ 0.67
SMARCA2-254ENST00000636903 TRPM2O94759 1503 aa19.22■□□□□ 0.67
SMARCA2-254ENST00000636903 SPATA31E1Q6ZUB1 1445 aa19.22■□□□□ 0.67
SMARCA2-254ENST00000636903 ABCC3O15438 1527 aa19.22■□□□□ 0.67
SMARCA2-254ENST00000636903 ZMYM4Q5VZL5 1548 aa19.22■□□□□ 0.67
SMARCA2-254ENST00000636903 POLR3GLQ9BT43 218 aa19.22■□□□□ 0.67
SMARCA2-254ENST00000636903 USP47Q96K76 1375 aa19.2■□□□□ 0.66
SMARCA2-254ENST00000636903 FBXO31Q5XUX0 539 aaPredicted RBP19.2■□□□□ 0.66
SMARCA2-254ENST00000636903 DNAJC5Q9H3Z4 198 aa19.2■□□□□ 0.66
SMARCA2-254ENST00000636903 UHRF1BP1Q6BDS2 1440 aa19.2■□□□□ 0.66
SMARCA2-254ENST00000636903 PRAG1Q86YV5 1406 aa19.2■□□□□ 0.66
SMARCA2-254ENST00000636903 NUTM2DQ5VT03 806 aaPredicted RBP19.19■□□□□ 0.66
SMARCA2-254ENST00000636903 ROCK2O75116 1388 aaKnown RBP19.19■□□□□ 0.66
SMARCA2-254ENST00000636903 ST20-MTHFSA0A0A6YYL1 179 aa19.16■□□□□ 0.66
SMARCA2-254ENST00000636903 LMTK2Q8IWU2 1503 aa19.16■□□□□ 0.66
SMARCA2-254ENST00000636903 ARID4BQ4LE39 1312 aaPredicted RBP19.16■□□□□ 0.66
SMARCA2-254ENST00000636903 RALGAPBQ86X10 1494 aa19.15■□□□□ 0.66
SMARCA2-254ENST00000636903 BCORL1Q5H9F3 1711 aa19.14■□□□□ 0.65
SMARCA2-254ENST00000636903 CAMSAP1Q5T5Y3 1602 aa19.14■□□□□ 0.65
SMARCA2-254ENST00000636903 CNGB1Q14028 1251 aaPredicted RBP19.13■□□□□ 0.65
SMARCA2-254ENST00000636903 ADGRF5Q8IZF2 1346 aa19.13■□□□□ 0.65
SMARCA2-254ENST00000636903 KIF7Q2M1P5 1343 aa19.12■□□□□ 0.65
SMARCA2-254ENST00000636903 MROH2AA6NES4 1674 aa19.11■□□□□ 0.65
SMARCA2-254ENST00000636903 IDI1Q13907 227 aa19.11■□□□□ 0.65
SMARCA2-254ENST00000636903 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
SMARCA2-254ENST00000636903 TRPM1Q7Z4N2 1603 aa19.1■□□□□ 0.65
SMARCA2-254ENST00000636903 CCDC7Q96M83 1385 aa19.09■□□□□ 0.65
SMARCA2-254ENST00000636903 ARHGEF40Q8TER5 1519 aa19.08■□□□□ 0.65
SMARCA2-254ENST00000636903 CFAP70Q5T0N1 1121 aa19.08■□□□□ 0.65
SMARCA2-254ENST00000636903 SYNMO15061 1565 aa19.07■□□□□ 0.64
SMARCA2-254ENST00000636903 KIF1BO60333 1816 aa19.06■□□□□ 0.64
SMARCA2-254ENST00000636903 NOS1P29475 1434 aa19.06■□□□□ 0.64
SMARCA2-254ENST00000636903 CNTLNQ9NXG0 1405 aa19.05■□□□□ 0.64
SMARCA2-254ENST00000636903 CLTCQ00610 1675 aaKnown RBP19.04■□□□□ 0.64
SMARCA2-254ENST00000636903 MADDQ8WXG6 1647 aa19.04■□□□□ 0.64
SMARCA2-254ENST00000636903 AGLP35573 1532 aa19.01■□□□□ 0.63
SMARCA2-254ENST00000636903 CEBPAP49715 358 aaPredicted RBP19.01■□□□□ 0.63
SMARCA2-254ENST00000636903 ESF1Q9H501 851 aaKnown RBP19.01■□□□□ 0.63
SMARCA2-254ENST00000636903 ARHGAP31Q2M1Z3 1444 aa19.01■□□□□ 0.63
SMARCA2-254ENST00000636903 ADGRB3O60242 1522 aa19■□□□□ 0.63
SMARCA2-254ENST00000636903 TMEM132EQ6IEE7 984 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms