RNA–Protein interactions for RNA: ENST00000636721.1

CACNB4-231, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-231	ENST00000636721	ERCC6L2	Q5T890	1561 aa		13.09	□□□□□ -0.31
CACNB4-231	ENST00000636721	ERBIN	Q96RT1	1412 aa		13.08	□□□□□ -0.31
CACNB4-231	ENST00000636721	EFCAB2	Q5VUJ9	269 aa		13.08	□□□□□ -0.32
CACNB4-231	ENST00000636721	MAGI2	Q86UL8	1455 aa		13.07	□□□□□ -0.32
CACNB4-231	ENST00000636721	USP47	Q96K76	1375 aa		13.06	□□□□□ -0.32
CACNB4-231	ENST00000636721	NEFL	P07196	543 aa		13.06	□□□□□ -0.32
CACNB4-231	ENST00000636721	PPP4R3CP	Q6ZMV5	832 aa		13.06	□□□□□ -0.32
CACNB4-231	ENST00000636721	ABCC1	P33527	1531 aa		13.06	□□□□□ -0.32
CACNB4-231	ENST00000636721	KIF7	Q2M1P5	1343 aa		13.06	□□□□□ -0.32
CACNB4-231	ENST00000636721	LAMC1	P11047	1609 aa		13.05	□□□□□ -0.32
CACNB4-231	ENST00000636721	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.05	□□□□□ -0.32
CACNB4-231	ENST00000636721	ATP10A	O60312	1499 aa		13.05	□□□□□ -0.32
CACNB4-231	ENST00000636721	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.04	□□□□□ -0.32
CACNB4-231	ENST00000636721	CCDC144A	A2RUR9	1427 aa		13.04	□□□□□ -0.32
CACNB4-231	ENST00000636721	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.03	□□□□□ -0.32
CACNB4-231	ENST00000636721	BCORL1	Q5H9F3	1711 aa		13.03	□□□□□ -0.32
CACNB4-231	ENST00000636721	C11orf95	C9JLR9	678 aa	Predicted RBP	13.02	□□□□□ -0.33
CACNB4-231	ENST00000636721	TRPM1	Q7Z4N2	1603 aa		13.01	□□□□□ -0.33
CACNB4-231	ENST00000636721	KTN1	Q86UP2	1357 aa	Known RBP	13.01	□□□□□ -0.33
CACNB4-231	ENST00000636721	OSCAR	Q8IYS5	282 aa		13	□□□□□ -0.33
CACNB4-231	ENST00000636721	STAC3	Q96MF2	364 aa		13	□□□□□ -0.33
CACNB4-231	ENST00000636721	ABCA9	Q8IUA7	1624 aa		13	□□□□□ -0.33
CACNB4-231	ENST00000636721	WDR7	Q9Y4E6	1490 aa		12.99	□□□□□ -0.33
CACNB4-231	ENST00000636721	CARD11	Q9BXL7	1154 aa		12.98	□□□□□ -0.33
CACNB4-231	ENST00000636721	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
CACNB4-231	ENST00000636721	ERICH6B	Q5W0A0	696 aa		12.98	□□□□□ -0.33
CACNB4-231	ENST00000636721	PRAG1	Q86YV5	1406 aa		12.97	□□□□□ -0.33
CACNB4-231	ENST00000636721	DEPDC5	O75140	1603 aa		12.97	□□□□□ -0.33
CACNB4-231	ENST00000636721	DCAF11	Q8TEB1	546 aa		12.97	□□□□□ -0.33
CACNB4-231	ENST00000636721	GPRASP1	Q5JY77	1395 aa		12.96	□□□□□ -0.33
CACNB4-231	ENST00000636721	ZNF326	Q5BKZ1	582 aa	Known RBP	12.96	□□□□□ -0.33
CACNB4-231	ENST00000636721		E9PCH4	1651 aa		12.96	□□□□□ -0.34
CACNB4-231	ENST00000636721	MRS2	Q9HD23	443 aa		12.95	□□□□□ -0.34
CACNB4-231	ENST00000636721	DHX29	Q7Z478	1369 aa	Known RBP	12.95	□□□□□ -0.34
CACNB4-231	ENST00000636721	ZFYVE16	Q7Z3T8	1539 aa		12.95	□□□□□ -0.34
CACNB4-231	ENST00000636721	SPAG9	O60271	1321 aa	Known RBP	12.94	□□□□□ -0.34
CACNB4-231	ENST00000636721	PLA2R1	Q13018	1463 aa		12.94	□□□□□ -0.34
CACNB4-231	ENST00000636721	FKBP8	Q14318	412 aa		12.94	□□□□□ -0.34
CACNB4-231	ENST00000636721	NEURL4	Q96JN8	1562 aa		12.94	□□□□□ -0.34
CACNB4-231	ENST00000636721	INO80	Q9ULG1	1556 aa	Predicted RBP	12.94	□□□□□ -0.34
CACNB4-231	ENST00000636721	CEP152	O94986	1710 aa		12.94	□□□□□ -0.34
CACNB4-231	ENST00000636721	TET3	O43151	1660 aa		12.94	□□□□□ -0.34
CACNB4-231	ENST00000636721	ZBED9	Q6R2W3	1325 aa		12.94	□□□□□ -0.34
CACNB4-231	ENST00000636721	RIMBP3C	A6NJZ7	1639 aa		12.94	□□□□□ -0.34
CACNB4-231	ENST00000636721	RIMBP3B	A6NNM3	1639 aa		12.94	□□□□□ -0.34
CACNB4-231	ENST00000636721	RIMBP3	Q9UFD9	1639 aa		12.94	□□□□□ -0.34
CACNB4-231	ENST00000636721	SPHKAP	Q2M3C7	1700 aa		12.93	□□□□□ -0.34
CACNB4-231	ENST00000636721	PRDM15	P57071	1507 aa	Predicted RBP	12.93	□□□□□ -0.34
CACNB4-231	ENST00000636721	CFAP74	Q9C0B2	1584 aa		12.93	□□□□□ -0.34
CACNB4-231	ENST00000636721	TRAPPC8	Q9Y2L5	1435 aa		12.93	□□□□□ -0.34
CACNB4-231	ENST00000636721	A2M	P01023	1474 aa		12.92	□□□□□ -0.34
CACNB4-231	ENST00000636721	ATP7A	Q04656	1500 aa		12.92	□□□□□ -0.34
CACNB4-231	ENST00000636721	TRPM2	O94759	1503 aa		12.91	□□□□□ -0.34
CACNB4-231	ENST00000636721	RNF17	Q9BXT8	1623 aa	Known RBP	12.91	□□□□□ -0.34
CACNB4-231	ENST00000636721	RALBP1	Q15311	655 aa		12.91	□□□□□ -0.34
CACNB4-231	ENST00000636721	KDM2A	Q9Y2K7	1162 aa		12.91	□□□□□ -0.34
CACNB4-231	ENST00000636721	KANK1	Q14678	1352 aa		12.91	□□□□□ -0.34
CACNB4-231	ENST00000636721	FANCA	O15360	1455 aa		12.91	□□□□□ -0.34
CACNB4-231	ENST00000636721	WASHC2C	Q9Y4E1	1318 aa		12.9	□□□□□ -0.34
CACNB4-231	ENST00000636721	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.9	□□□□□ -0.34	6e-7	■■■■■ 26.8
CACNB4-231	ENST00000636721	VWDE	Q8N2E2	1590 aa		12.9	□□□□□ -0.34
CACNB4-231	ENST00000636721	ST20-MTHFS	A0A0A6YYL1	179 aa		12.89	□□□□□ -0.35
CACNB4-231	ENST00000636721	KIAA1210	Q9ULL0	1709 aa		12.89	□□□□□ -0.35
CACNB4-231	ENST00000636721	PTPRT	O14522	1441 aa		12.89	□□□□□ -0.35
CACNB4-231	ENST00000636721	BRD4	O60885	1362 aa	Predicted RBP	12.87	□□□□□ -0.35
CACNB4-231	ENST00000636721	SLC24A1	O60721	1099 aa		12.87	□□□□□ -0.35
CACNB4-231	ENST00000636721	CNKSR2	Q8WXI2	1034 aa		12.87	□□□□□ -0.35
CACNB4-231	ENST00000636721	ADGRL1	O94910	1474 aa		12.86	□□□□□ -0.35
CACNB4-231	ENST00000636721	FAM9B	Q8IZU0	186 aa		12.86	□□□□□ -0.35
CACNB4-231	ENST00000636721	COL17A1	Q9UMD9	1497 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNB4-231	ENST00000636721	ASXL2	Q76L83	1435 aa		12.85	□□□□□ -0.35
CACNB4-231	ENST00000636721	KIF1B	O60333	1816 aa		12.85	□□□□□ -0.35
CACNB4-231	ENST00000636721	MADD	Q8WXG6	1647 aa		12.84	□□□□□ -0.35
CACNB4-231	ENST00000636721	IQGAP1	P46940	1657 aa		12.84	□□□□□ -0.35
CACNB4-231	ENST00000636721	NPM1	P06748	294 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
CACNB4-231	ENST00000636721	CCDC184	Q52MB2	194 aa		12.84	□□□□□ -0.35
CACNB4-231	ENST00000636721	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.84	□□□□□ -0.35
CACNB4-231	ENST00000636721	SCAPER	Q9BY12	1400 aa		12.84	□□□□□ -0.35
CACNB4-231	ENST00000636721	ZNF518A	Q6AHZ1	1483 aa		12.84	□□□□□ -0.35
CACNB4-231	ENST00000636721	RGL3	Q3MIN7	710 aa		12.83	□□□□□ -0.35
CACNB4-231	ENST00000636721	POLR3GL	Q9BT43	218 aa		12.83	□□□□□ -0.35
CACNB4-231	ENST00000636721	INSR	P06213	1382 aa		12.83	□□□□□ -0.36
CACNB4-231	ENST00000636721	ZMYM4	Q5VZL5	1548 aa		12.83	□□□□□ -0.36
CACNB4-231	ENST00000636721	TMF1	P82094	1093 aa		12.83	□□□□□ -0.36
CACNB4-231	ENST00000636721	AFAP1	Q8N556	730 aa		12.83	□□□□□ -0.36
CACNB4-231	ENST00000636721	TMC1	Q8TDI8	760 aa		12.83	□□□□□ -0.36
CACNB4-231	ENST00000636721	KIDINS220	Q9ULH0	1771 aa		12.82	□□□□□ -0.36
CACNB4-231	ENST00000636721	LMTK2	Q8IWU2	1503 aa		12.82	□□□□□ -0.36
CACNB4-231	ENST00000636721	CLTCL1	P53675	1640 aa		12.82	□□□□□ -0.36
CACNB4-231	ENST00000636721	MYT1	Q01538	1121 aa		12.82	□□□□□ -0.36
CACNB4-231	ENST00000636721	CDCA8	Q53HL2	280 aa		12.82	□□□□□ -0.36
CACNB4-231	ENST00000636721	SMG6	Q86US8	1419 aa	Known RBP	12.81	□□□□□ -0.36
CACNB4-231	ENST00000636721	HOXD11	P31277	338 aa	Predicted RBP	12.81	□□□□□ -0.36
CACNB4-231	ENST00000636721	PNISR	Q8TF01	805 aa	Known RBP	12.8	□□□□□ -0.36
CACNB4-231	ENST00000636721	LRPPRC	P42704	1394 aa	Known RBP	12.79	□□□□□ -0.36
CACNB4-231	ENST00000636721	MROH1	Q8NDA8	1641 aa		12.79	□□□□□ -0.36
CACNB4-231	ENST00000636721	PARD3	Q8TEW0	1356 aa		12.79	□□□□□ -0.36
CACNB4-231	ENST00000636721	EFCAB6	Q5THR3	1501 aa		12.78	□□□□□ -0.36
CACNB4-231	ENST00000636721	EIF3A	Q14152	1382 aa	Known RBP	12.78	□□□□□ -0.36
CACNB4-231	ENST00000636721	NBPF1	Q3BBV0	1214 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms