RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 GPS2Q13227 327 aa21.67■■□□□ 1.06
CACNA1A-225ENST00000636389 ZNF592Q92610 1267 aa21.67■■□□□ 1.06
CACNA1A-225ENST00000636389 CT47A1Q5JQC4 288 aaPredicted RBP21.67■■□□□ 1.06
CACNA1A-225ENST00000636389 EVA1CP58658 441 aa21.66■■□□□ 1.06
CACNA1A-225ENST00000636389 CLIP1P30622 1438 aa21.66■■□□□ 1.06
CACNA1A-225ENST00000636389 MEX3CQ5U5Q3 659 aaKnown RBP21.66■■□□□ 1.06
CACNA1A-225ENST00000636389 CCDC180Q9P1Z9 1646 aa21.65■■□□□ 1.06
CACNA1A-225ENST00000636389 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.65■■□□□ 1.06
CACNA1A-225ENST00000636389 PAF1Q8N7H5 531 aa21.65■■□□□ 1.06
CACNA1A-225ENST00000636389 GGT6Q6P531 493 aa21.65■■□□□ 1.06
CACNA1A-225ENST00000636389 HMMRO75330 724 aa21.65■■□□□ 1.06
CACNA1A-225ENST00000636389 SMC4Q9NTJ3 1288 aa21.64■■□□□ 1.05
CACNA1A-225ENST00000636389 NAP1L1P55209 391 aaKnown RBP21.64■■□□□ 1.05
CACNA1A-225ENST00000636389 ZFYVE27Q5T4F4 411 aa21.64■■□□□ 1.05
CACNA1A-225ENST00000636389 SYNE3Q6ZMZ3 975 aa21.64■■□□□ 1.05
CACNA1A-225ENST00000636389 VPS37DQ86XT2 251 aa21.63■■□□□ 1.05
CACNA1A-225ENST00000636389 RILPL2Q969X0 211 aa21.63■■□□□ 1.05
CACNA1A-225ENST00000636389 KAT6BQ8WYB5 2073 aa21.62■■□□□ 1.05
CACNA1A-225ENST00000636389 HDAC5Q9UQL6 1122 aa21.62■■□□□ 1.05
CACNA1A-225ENST00000636389 ZNF771Q7L3S4 317 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-225ENST00000636389 ST18O60284 1047 aa21.61■■□□□ 1.05
CACNA1A-225ENST00000636389 BECN2A8MW95 431 aa21.61■■□□□ 1.05
CACNA1A-225ENST00000636389 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
CACNA1A-225ENST00000636389 IPO7O95373 1038 aaKnown RBP21.6■■□□□ 1.05
CACNA1A-225ENST00000636389 CHMP4AQ9BY43 222 aa21.6■■□□□ 1.05
CACNA1A-225ENST00000636389 NGEFQ8N5V2 710 aa21.6■■□□□ 1.05
CACNA1A-225ENST00000636389 AMPHP49418 695 aa21.6■■□□□ 1.05
CACNA1A-225ENST00000636389 DCAF8L1A6NGE4 600 aa21.59■■□□□ 1.05
CACNA1A-225ENST00000636389 R3HCC1Q9Y3T6 440 aaKnown RBP21.59■■□□□ 1.05
CACNA1A-225ENST00000636389 APPP05067 770 aa21.58■■□□□ 1.05
CACNA1A-225ENST00000636389 PMFBP1Q8TBY8 1022 aa21.58■■□□□ 1.05
CACNA1A-225ENST00000636389 TRIM29Q14134 588 aa21.58■■□□□ 1.04
CACNA1A-225ENST00000636389 TCERG1O14776 1098 aaKnown RBP21.58■■□□□ 1.04
CACNA1A-225ENST00000636389 NGDNQ8NEJ9 315 aaKnown RBP21.58■■□□□ 1.04
CACNA1A-225ENST00000636389 RUFY1Q96T51 708 aa21.57■■□□□ 1.04
CACNA1A-225ENST00000636389 NUTM2FA1L443 756 aa21.56■■□□□ 1.04
CACNA1A-225ENST00000636389 HSP90AB2PQ58FF8 381 aa21.56■■□□□ 1.04
CACNA1A-225ENST00000636389 SIN3AQ96ST3 1273 aa21.56■■□□□ 1.04
CACNA1A-225ENST00000636389 MAP7D2Q96T17 732 aa21.56■■□□□ 1.04
CACNA1A-225ENST00000636389 KTN1Q86UP2 1357 aaKnown RBP21.56■■□□□ 1.04
CACNA1A-225ENST00000636389 EPS15P42566 896 aa21.55■■□□□ 1.04
CACNA1A-225ENST00000636389 CCDC47Q96A33 483 aaKnown RBP21.55■■□□□ 1.04
CACNA1A-225ENST00000636389 ANKRD20A12PQ8NF67 263 aa21.55■■□□□ 1.04
CACNA1A-225ENST00000636389 SYTL4Q96C24 671 aaPredicted RBP21.54■■□□□ 1.04
CACNA1A-225ENST00000636389 VSIG10Q8N0Z9 540 aa21.54■■□□□ 1.04
CACNA1A-225ENST00000636389 TMEM132AQ24JP5 1023 aa21.52■■□□□ 1.04
CACNA1A-225ENST00000636389 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.51■■□□□ 1.03
CACNA1A-225ENST00000636389 HOMER1Q86YM7 354 aa21.51■■□□□ 1.03
CACNA1A-225ENST00000636389 HSP90AA2PQ14568 343 aaPredicted RBP21.5■■□□□ 1.03
CACNA1A-225ENST00000636389 BCL11BQ9C0K0 894 aaPredicted RBP21.5■■□□□ 1.03
CACNA1A-225ENST00000636389 RCAN3Q9UKA8 241 aa21.5■■□□□ 1.03
CACNA1A-225ENST00000636389 AK7Q96M32 723 aa21.49■■□□□ 1.03
CACNA1A-225ENST00000636389 CLUAP1Q96AJ1 413 aa21.49■■□□□ 1.03
CACNA1A-225ENST00000636389 TEX35Q5T0J7 233 aa21.49■■□□□ 1.03
CACNA1A-225ENST00000636389 WWC2Q6AWC2 1192 aa21.49■■□□□ 1.03
CACNA1A-225ENST00000636389 ROCK2O75116 1388 aaKnown RBP21.48■■□□□ 1.03
CACNA1A-225ENST00000636389 SKIDA1Q1XH10 827 aa21.48■■□□□ 1.03
CACNA1A-225ENST00000636389 CCDC146Q8IYE0 955 aa21.48■■□□□ 1.03
CACNA1A-225ENST00000636389 HOOK1Q9UJC3 728 aaKnown RBP21.48■■□□□ 1.03
CACNA1A-225ENST00000636389 C1orf141Q5JVX7 400 aa21.47■■□□□ 1.03
CACNA1A-225ENST00000636389 EID1Q9Y6B2 187 aa21.47■■□□□ 1.03
CACNA1A-225ENST00000636389 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
CACNA1A-225ENST00000636389 CCNB3Q8WWL7 1395 aa21.47■■□□□ 1.03
CACNA1A-225ENST00000636389 NFXL1Q6ZNB6 911 aa21.47■■□□□ 1.03
CACNA1A-225ENST00000636389 NUTM2DQ5VT03 806 aaPredicted RBP21.46■■□□□ 1.03
CACNA1A-225ENST00000636389 CCAR1Q8IX12 1150 aaKnown RBP21.46■■□□□ 1.03
CACNA1A-225ENST00000636389 FOSBP53539 338 aa21.46■■□□□ 1.03
CACNA1A-225ENST00000636389 LRRFIP1Q32MZ4 808 aaKnown RBP21.44■■□□□ 1.02
CACNA1A-225ENST00000636389 ERICH2A1L162 156 aa21.44■■□□□ 1.02
CACNA1A-225ENST00000636389 FYB1O15117 783 aa21.43■■□□□ 1.02
CACNA1A-225ENST00000636389 CDR1P51861 262 aa21.42■■□□□ 1.02
CACNA1A-225ENST00000636389 CPLX2Q6PUV4 134 aaKnown RBP21.42■■□□□ 1.02
CACNA1A-225ENST00000636389 PLCD4Q9BRC7 762 aa21.41■■□□□ 1.02
CACNA1A-225ENST00000636389 IKQ13123 557 aaPredicted RBP21.41■■□□□ 1.02
CACNA1A-225ENST00000636389 CPLX1O14810 134 aa21.4■■□□□ 1.02
CACNA1A-225ENST00000636389 ATP6V1DQ9Y5K8 247 aa21.4■■□□□ 1.02
CACNA1A-225ENST00000636389 MTMR7Q9Y216 660 aa21.4■■□□□ 1.02
CACNA1A-225ENST00000636389 CHMP4CQ96CF2 233 aa21.39■■□□□ 1.01
CACNA1A-225ENST00000636389 RBM33Q96EV2 1170 aaKnown RBP21.39■■□□□ 1.01
CACNA1A-225ENST00000636389 RBM19Q9Y4C8 960 aaKnown RBP21.39■■□□□ 1.01
CACNA1A-225ENST00000636389 SLC4A3P48751 1232 aa21.39■■□□□ 1.01
CACNA1A-225ENST00000636389 CCDC97Q96F63 343 aaPredicted RBP21.39■■□□□ 1.01
CACNA1A-225ENST00000636389 DIAPH3Q9NSV4 1193 aa21.38■■□□□ 1.01
CACNA1A-225ENST00000636389 RDXP35241 583 aaKnown RBP21.38■■□□□ 1.01
CACNA1A-225ENST00000636389 TRDNQ13061 729 aa21.38■■□□□ 1.01
CACNA1A-225ENST00000636389 DDX11L8A8MPP1 907 aa21.38■■□□□ 1.01
CACNA1A-225ENST00000636389 ANKRD45Q5TZF3 282 aa21.37■■□□□ 1.01
CACNA1A-225ENST00000636389 C9orf78Q9NZ63 289 aaPredicted RBP21.37■■□□□ 1.01
CACNA1A-225ENST00000636389 ANO2Q9NQ90 1003 aa21.37■■□□□ 1.01
CACNA1A-225ENST00000636389 DDX49Q9Y6V7 483 aaKnown RBP21.37■■□□□ 1.01
CACNA1A-225ENST00000636389 TTC5Q8N0Z6 440 aa21.37■■□□□ 1.01
CACNA1A-225ENST00000636389 CCDC191Q8NCU4 936 aa21.37■■□□□ 1.01
CACNA1A-225ENST00000636389 TERF2IPQ9NYB0 399 aa21.37■■□□□ 1.01
CACNA1A-225ENST00000636389 LMOD3Q0VAK6 560 aa21.37■■□□□ 1.01
CACNA1A-225ENST00000636389 CCDC173Q0VFZ6 552 aa21.36■■□□□ 1.01
CACNA1A-225ENST00000636389 TTLL5Q6EMB2 1281 aa21.36■■□□□ 1.01
CACNA1A-225ENST00000636389 OFD1O75665 1012 aa21.35■■□□□ 1.01
CACNA1A-225ENST00000636389 NECTIN2Q92692 538 aa21.35■■□□□ 1.01
CACNA1A-225ENST00000636389 PPM1FP49593 454 aaPredicted RBP21.35■■□□□ 1.01
CACNA1A-225ENST00000636389 CAGE1Q8TC20 777 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms