RNA–Protein interactions for RNA: ENST00000636229.1

CCDC196-207, Transcript of coiled-coil domain containing 196, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC196, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-207ENST00000636229 VWDEQ8N2E2 1590 aa13.64□□□□□ -0.23
CCDC196-207ENST00000636229 NEURL4Q96JN8 1562 aa13.64□□□□□ -0.23
CCDC196-207ENST00000636229 UPF1Q92900 1129 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC196-207ENST00000636229 ARHGAP5Q13017 1502 aa13.63□□□□□ -0.23
CCDC196-207ENST00000636229 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
CCDC196-207ENST00000636229 DNMT1P26358 1616 aaKnown RBP13.62□□□□□ -0.23
CCDC196-207ENST00000636229 CLTCQ00610 1675 aaKnown RBP13.62□□□□□ -0.23
CCDC196-207ENST00000636229 POLR1AO95602 1720 aaPredicted RBP13.61□□□□□ -0.23
CCDC196-207ENST00000636229 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
CCDC196-207ENST00000636229 KIF14Q15058 1648 aa13.6□□□□□ -0.23
CCDC196-207ENST00000636229 SRCAPQ6ZRS2 3230 aa13.59□□□□□ -0.23
CCDC196-207ENST00000636229 FKBP8Q14318 412 aa13.58□□□□□ -0.24
CCDC196-207ENST00000636229 LRRC7Q96NW7 1537 aa13.58□□□□□ -0.24
CCDC196-207ENST00000636229 STRCP1A6NGW2 1772 aa13.58□□□□□ -0.24
CCDC196-207ENST00000636229 ANKLE2Q86XL3 938 aa13.57□□□□□ -0.24
CCDC196-207ENST00000636229 CDC42BPBQ9Y5S2 1711 aa13.56□□□□□ -0.24
CCDC196-207ENST00000636229 RNF17Q9BXT8 1623 aaKnown RBP13.55□□□□□ -0.24
CCDC196-207ENST00000636229 GGT6Q6P531 493 aa13.54□□□□□ -0.24
CCDC196-207ENST00000636229 ABCC1P33527 1531 aa13.54□□□□□ -0.24
CCDC196-207ENST00000636229 ITSN2Q9NZM3 1697 aa13.53□□□□□ -0.24
CCDC196-207ENST00000636229 CDK11AQ9UQ88 783 aaPredicted RBP13.53□□□□□ -0.24
CCDC196-207ENST00000636229 ZBTB12Q9Y330 459 aaPredicted RBP13.53□□□□□ -0.24
CCDC196-207ENST00000636229 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC196-207ENST00000636229 NPHP4O75161 1426 aaPredicted RBP13.53□□□□□ -0.24
CCDC196-207ENST00000636229 ATP1B4Q9UN42 357 aaPredicted RBP13.52□□□□□ -0.25
CCDC196-207ENST00000636229 MED14O60244 1454 aa13.51□□□□□ -0.25
CCDC196-207ENST00000636229 TROQ12816 1431 aaPredicted RBP13.51□□□□□ -0.25
CCDC196-207ENST00000636229 FBXO31Q5XUX0 539 aaPredicted RBP13.5□□□□□ -0.25
CCDC196-207ENST00000636229 FAM135BQ49AJ0 1406 aa13.49□□□□□ -0.25
CCDC196-207ENST00000636229 TNRQ92752 1358 aa13.49□□□□□ -0.25
CCDC196-207ENST00000636229 THEMISQ8N1K5 641 aaPredicted RBP13.49□□□□□ -0.25
CCDC196-207ENST00000636229 SAMD9LQ8IVG5 1584 aa13.49□□□□□ -0.25
CCDC196-207ENST00000636229 SPAG9O60271 1321 aaKnown RBP13.48□□□□□ -0.25
CCDC196-207ENST00000636229 TRIM52Q96A61 297 aa13.48□□□□□ -0.25
CCDC196-207ENST00000636229 DEPDC5O75140 1603 aa13.48□□□□□ -0.25
CCDC196-207ENST00000636229 SYNMO15061 1565 aa13.47□□□□□ -0.25
CCDC196-207ENST00000636229 IQGAP1P46940 1657 aa13.47□□□□□ -0.25
CCDC196-207ENST00000636229 PREX2Q70Z35 1606 aa13.46□□□□□ -0.26
CCDC196-207ENST00000636229 PLXNC1O60486 1568 aa13.45□□□□□ -0.26
CCDC196-207ENST00000636229 A2MP01023 1474 aa13.45□□□□□ -0.26
CCDC196-207ENST00000636229 XIRP1Q702N8 1843 aaKnown RBP13.45□□□□□ -0.26
CCDC196-207ENST00000636229 CLIP1P30622 1438 aa13.45□□□□□ -0.26
CCDC196-207ENST00000636229 HNRNPMP52272 730 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC196-207ENST00000636229 ATP7AQ04656 1500 aa13.41□□□□□ -0.26
CCDC196-207ENST00000636229 ZNF777Q9ULD5 760 aaPredicted RBP13.41□□□□□ -0.26
CCDC196-207ENST00000636229 UGGT1Q9NYU2 1555 aa13.41□□□□□ -0.26
CCDC196-207ENST00000636229 FAM135AQ9P2D6 1515 aa13.4□□□□□ -0.26
CCDC196-207ENST00000636229 MIA2Q96PC5 1412 aa13.39□□□□□ -0.27
CCDC196-207ENST00000636229 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
CCDC196-207ENST00000636229 ROBO1Q9Y6N7 1651 aa13.39□□□□□ -0.27
CCDC196-207ENST00000636229 CDC42BPAQ5VT25 1732 aa13.39□□□□□ -0.27
CCDC196-207ENST00000636229 PZPP20742 1482 aa13.38□□□□□ -0.27
CCDC196-207ENST00000636229 ZNF772Q68DY9 489 aaPredicted RBP13.38□□□□□ -0.27
CCDC196-207ENST00000636229 SYCP2Q9BX26 1530 aa13.38□□□□□ -0.27
CCDC196-207ENST00000636229 NLRP1Q9C000 1473 aa13.37□□□□□ -0.27
CCDC196-207ENST00000636229 FMN1Q68DA7 1419 aa13.37□□□□□ -0.27
CCDC196-207ENST00000636229 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
CCDC196-207ENST00000636229 INO80Q9ULG1 1556 aaPredicted RBP13.37□□□□□ -0.27
CCDC196-207ENST00000636229 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
CCDC196-207ENST00000636229 JCADQ9P266 1359 aa13.36□□□□□ -0.27
CCDC196-207ENST00000636229 RXRBP28702 533 aa13.36□□□□□ -0.27
CCDC196-207ENST00000636229 LRP6O75581 1613 aa13.33□□□□□ -0.28
CCDC196-207ENST00000636229 ADGBQ8N7X0 1667 aa13.33□□□□□ -0.28
CCDC196-207ENST00000636229 KDM5DQ9BY66 1539 aa13.33□□□□□ -0.28
CCDC196-207ENST00000636229 MEX3CQ5U5Q3 659 aaKnown RBP13.32□□□□□ -0.28
CCDC196-207ENST00000636229 TMEM94Q12767 1356 aa13.32□□□□□ -0.28
CCDC196-207ENST00000636229 KIAA1107Q9UPP5 1409 aa13.31□□□□□ -0.28
CCDC196-207ENST00000636229 CDK12Q9NYV4 1490 aaPredicted RBP13.31□□□□□ -0.28
CCDC196-207ENST00000636229 PHLPP1O60346 1717 aa13.31□□□□□ -0.28
CCDC196-207ENST00000636229 KIF3BO15066 747 aa13.31□□□□□ -0.28
CCDC196-207ENST00000636229 LTKP29376 864 aa13.31□□□□□ -0.28
CCDC196-207ENST00000636229 WASHC2CQ9Y4E1 1318 aa13.31□□□□□ -0.28
CCDC196-207ENST00000636229 RBM33Q96EV2 1170 aaKnown RBP13.29□□□□□ -0.28
CCDC196-207ENST00000636229 ZRANB1Q9UGI0 708 aa13.29□□□□□ -0.28
CCDC196-207ENST00000636229 DHX29Q7Z478 1369 aaKnown RBP13.29□□□□□ -0.28
CCDC196-207ENST00000636229 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
CCDC196-207ENST00000636229 SPATA31A6Q5VVP1 1343 aa13.28□□□□□ -0.28
CCDC196-207ENST00000636229 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
CCDC196-207ENST00000636229 SETBP1Q9Y6X0 1596 aa13.28□□□□□ -0.28
CCDC196-207ENST00000636229 TXNDC2Q86VQ3 553 aa13.27□□□□□ -0.29
CCDC196-207ENST00000636229 PROSER2Q86WR7 435 aaPredicted RBP13.27□□□□□ -0.29
CCDC196-207ENST00000636229 SLAIN2Q9P270 581 aa13.27□□□□□ -0.29
CCDC196-207ENST00000636229 ARHGAP35Q9NRY4 1499 aa13.27□□□□□ -0.29
CCDC196-207ENST00000636229 LRRC9Q6ZRR7 1453 aa13.26□□□□□ -0.29
CCDC196-207ENST00000636229 PROM2Q8N271 834 aa13.26□□□□□ -0.29
CCDC196-207ENST00000636229 COL16A1Q07092 1604 aaPredicted RBP13.25□□□□□ -0.29
CCDC196-207ENST00000636229 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
CCDC196-207ENST00000636229 PLEKHH2Q8IVE3 1493 aa13.25□□□□□ -0.29
CCDC196-207ENST00000636229 CFDP1Q9UEE9 299 aaPredicted RBP13.25□□□□□ -0.29
CCDC196-207ENST00000636229 CFAP65Q6ZU64 1925 aaKnown RBP13.24□□□□□ -0.29
CCDC196-207ENST00000636229 KCNA6P17658 529 aa13.24□□□□□ -0.29
CCDC196-207ENST00000636229 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
CCDC196-207ENST00000636229 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
CCDC196-207ENST00000636229 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
CCDC196-207ENST00000636229 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
CCDC196-207ENST00000636229 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
CCDC196-207ENST00000636229 NUTM2DQ5VT03 806 aaPredicted RBP13.23□□□□□ -0.29
CCDC196-207ENST00000636229 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
CCDC196-207ENST00000636229 FGD6Q6ZV73 1430 aa13.22□□□□□ -0.29
CCDC196-207ENST00000636229 UBR1Q8IWV7 1749 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms