RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 CALD1Q05682 793 aaKnown RBP12.21□□□□□ -0.45
SPTAN1-228ENST00000635853 SYAP1Q96A49 352 aaPredicted RBP12.21□□□□□ -0.45
SPTAN1-228ENST00000635853 CREBRFQ8IUR6 639 aa12.21□□□□□ -0.46
SPTAN1-228ENST00000635853 GPATCH3Q96I76 525 aa12.21□□□□□ -0.46
SPTAN1-228ENST00000635853 GGT6Q6P531 493 aa12.21□□□□□ -0.46
SPTAN1-228ENST00000635853 APPP05067 770 aa12.2□□□□□ -0.46
SPTAN1-228ENST00000635853 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
SPTAN1-228ENST00000635853 MEX3CQ5U5Q3 659 aaKnown RBP12.2□□□□□ -0.46
SPTAN1-228ENST00000635853 CCDC66A2RUB6 948 aa12.2□□□□□ -0.46
SPTAN1-228ENST00000635853 CTDP1Q9Y5B0 961 aaPredicted RBP12.2□□□□□ -0.46
SPTAN1-228ENST00000635853 CCDC34Q96HJ3 373 aa12.2□□□□□ -0.46
SPTAN1-228ENST00000635853 CCDC173Q0VFZ6 552 aa12.19□□□□□ -0.46
SPTAN1-228ENST00000635853 CHMP5Q9NZZ3 219 aa12.19□□□□□ -0.46
SPTAN1-228ENST00000635853 RALBP1Q15311 655 aa12.19□□□□□ -0.46
SPTAN1-228ENST00000635853 WASHC2CQ9Y4E1 1318 aa12.19□□□□□ -0.46
SPTAN1-228ENST00000635853 CWC22Q9HCG8 908 aaKnown RBP12.19□□□□□ -0.46
SPTAN1-228ENST00000635853 TOMM22Q9NS69 142 aa12.19□□□□□ -0.46
SPTAN1-228ENST00000635853 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
SPTAN1-228ENST00000635853 TCEAL9Q9UHQ7 104 aa12.18□□□□□ -0.46
SPTAN1-228ENST00000635853 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
SPTAN1-228ENST00000635853 PMFBP1Q8TBY8 1022 aa12.18□□□□□ -0.46
SPTAN1-228ENST00000635853 PRKRIP1Q9H875 184 aaPredicted RBP12.18□□□□□ -0.46
SPTAN1-228ENST00000635853 DCAF11Q8TEB1 546 aa12.17□□□□□ -0.46
SPTAN1-228ENST00000635853 TRIM34Q9BYJ4 488 aa12.17□□□□□ -0.46
SPTAN1-228ENST00000635853 ESPNB1AK53 854 aa12.17□□□□□ -0.46
SPTAN1-228ENST00000635853 SPAG9O60271 1321 aaKnown RBP12.17□□□□□ -0.46
SPTAN1-228ENST00000635853 WWC1Q8IX03 1113 aa12.17□□□□□ -0.46
SPTAN1-228ENST00000635853 IPO8O15397 1037 aaKnown RBP12.16□□□□□ -0.46
SPTAN1-228ENST00000635853 STK31Q9BXU1 1019 aa12.16□□□□□ -0.46
SPTAN1-228ENST00000635853 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
SPTAN1-228ENST00000635853 CRBNQ96SW2 442 aa12.15□□□□□ -0.46
SPTAN1-228ENST00000635853 EIF4G1Q04637 1599 aaKnown RBP12.15□□□□□ -0.46
SPTAN1-228ENST00000635853 SMG6Q86US8 1419 aaKnown RBP12.15□□□□□ -0.46
SPTAN1-228ENST00000635853 CHMP4AQ9BY43 222 aa12.15□□□□□ -0.46
SPTAN1-228ENST00000635853 CCDC39Q9UFE4 941 aa12.15□□□□□ -0.46
SPTAN1-228ENST00000635853 EID1Q9Y6B2 187 aa12.15□□□□□ -0.46
SPTAN1-228ENST00000635853 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.46
SPTAN1-228ENST00000635853 RWDD1Q9H446 243 aaPredicted RBP12.14□□□□□ -0.47
SPTAN1-228ENST00000635853 TRAK2O60296 914 aa12.14□□□□□ -0.47
SPTAN1-228ENST00000635853 UQCRHLA0A096LP55 91 aa12.14□□□□□ -0.47
SPTAN1-228ENST00000635853 PHF14O94880 888 aa12.14□□□□□ -0.47
SPTAN1-228ENST00000635853 UQCRHP07919 91 aa12.14□□□□□ -0.47
SPTAN1-228ENST00000635853 GOLGA6L1Q8N7Z2 621 aa12.14□□□□□ -0.47
SPTAN1-228ENST00000635853 RAD21O60216 631 aa12.14□□□□□ -0.47
SPTAN1-228ENST00000635853 MFAP1P55081 439 aaKnown RBP12.14□□□□□ -0.47
SPTAN1-228ENST00000635853 CLCN1P35523 988 aa12.13□□□□□ -0.47
SPTAN1-228ENST00000635853 ITPRIPQ8IWB1 547 aa12.13□□□□□ -0.47
SPTAN1-228ENST00000635853 BBXQ8WY36 941 aaPredicted RBP12.13□□□□□ -0.47
SPTAN1-228ENST00000635853 GRPEL1Q9HAV7 217 aa12.13□□□□□ -0.47
SPTAN1-228ENST00000635853 NASPP49321 788 aaPredicted RBP12.13□□□□□ -0.47
SPTAN1-228ENST00000635853 DDX49Q9Y6V7 483 aaKnown RBP12.13□□□□□ -0.47
SPTAN1-228ENST00000635853 CNTLNQ9NXG0 1405 aa12.13□□□□□ -0.47
SPTAN1-228ENST00000635853 PDIA4P13667 645 aaKnown RBP12.13□□□□□ -0.47
SPTAN1-228ENST00000635853 KANK4Q5T7N3 995 aaPredicted RBP12.12□□□□□ -0.47
SPTAN1-228ENST00000635853 TRIM6-TRIM34B2RNG4 842 aa12.12□□□□□ -0.47
SPTAN1-228ENST00000635853 HDAC5Q9UQL6 1122 aa12.11□□□□□ -0.47
SPTAN1-228ENST00000635853 PHLDB1Q86UU1 1377 aa12.11□□□□□ -0.47
SPTAN1-228ENST00000635853 EVA1CP58658 441 aa12.11□□□□□ -0.47
SPTAN1-228ENST00000635853 NGDNQ8NEJ9 315 aaKnown RBP12.11□□□□□ -0.47
SPTAN1-228ENST00000635853 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
SPTAN1-228ENST00000635853 NOL10Q9BSC4 688 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-228ENST00000635853 TPM3P06753 285 aa12.1□□□□□ -0.47
SPTAN1-228ENST00000635853 ROCK2O75116 1388 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-228ENST00000635853 PES1O00541 588 aaKnown RBP12.09□□□□□ -0.47
SPTAN1-228ENST00000635853 CCDC88BA6NC98 1476 aa12.09□□□□□ -0.47
SPTAN1-228ENST00000635853 U2AF1L5P0DN76 240 aaPredicted RBP12.09□□□□□ -0.47
SPTAN1-228ENST00000635853 HMGN5P82970 282 aaKnown RBP12.09□□□□□ -0.47
SPTAN1-228ENST00000635853 U2AF1Q01081 240 aaKnown RBP eCLIP12.09□□□□□ -0.47
SPTAN1-228ENST00000635853 TEX35Q5T0J7 233 aa12.09□□□□□ -0.47
SPTAN1-228ENST00000635853 AMOTL1Q8IY63 956 aa12.09□□□□□ -0.47
SPTAN1-228ENST00000635853 LTV1Q96GA3 475 aaPredicted RBP12.09□□□□□ -0.47
SPTAN1-228ENST00000635853 AMPHP49418 695 aa12.08□□□□□ -0.48
SPTAN1-228ENST00000635853 SETQ01105 290 aaPredicted RBP12.08□□□□□ -0.48
SPTAN1-228ENST00000635853 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
SPTAN1-228ENST00000635853 AKNAQ7Z591 1439 aa12.08□□□□□ -0.48
SPTAN1-228ENST00000635853 TPD52L1Q16890 204 aaPredicted RBP12.07□□□□□ -0.48
SPTAN1-228ENST00000635853 NOM1Q5C9Z4 860 aaKnown RBP12.07□□□□□ -0.48
SPTAN1-228ENST00000635853 SLC4A10Q6U841 1118 aa12.07□□□□□ -0.48
SPTAN1-228ENST00000635853 DIAPH3Q9NSV4 1193 aa12.07□□□□□ -0.48
SPTAN1-228ENST00000635853 KIF15Q9NS87 1388 aa12.07□□□□□ -0.48
SPTAN1-228ENST00000635853 ARHGAP35Q9NRY4 1499 aa12.07□□□□□ -0.48
SPTAN1-228ENST00000635853 MYBBP1AQ9BQG0 1328 aaKnown RBP12.06□□□□□ -0.48
SPTAN1-228ENST00000635853 PRDM10Q9NQV6 1147 aa12.06□□□□□ -0.48
SPTAN1-228ENST00000635853 TSPYL1Q9H0U9 437 aa12.06□□□□□ -0.48
SPTAN1-228ENST00000635853 ZHX1Q9UKY1 873 aaPredicted RBP12.06□□□□□ -0.48
SPTAN1-228ENST00000635853 PLIN1O60240 522 aa12.06□□□□□ -0.48
SPTAN1-228ENST00000635853 ZSCAN30Q86W11 494 aa12.06□□□□□ -0.48
SPTAN1-228ENST00000635853 HMMRO75330 724 aa12.05□□□□□ -0.48
SPTAN1-228ENST00000635853 SMAP1Q8IYB5 467 aaPredicted RBP12.05□□□□□ -0.48
SPTAN1-228ENST00000635853 AKAP17AQ02040 695 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-228ENST00000635853 NOL8Q76FK4 1167 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-228ENST00000635853 CALRP27797 417 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-228ENST00000635853 KIF16BQ96L93 1317 aa12.04□□□□□ -0.48
SPTAN1-228ENST00000635853 KIF27Q86VH2 1401 aa12.04□□□□□ -0.48
SPTAN1-228ENST00000635853 SF3A1Q15459 793 aaKnown RBP12.03□□□□□ -0.48
SPTAN1-228ENST00000635853 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
SPTAN1-228ENST00000635853 FHAD1B1AJZ9 1412 aa12.03□□□□□ -0.48
SPTAN1-228ENST00000635853 TSR1Q2NL82 804 aaKnown RBP12.02□□□□□ -0.49
SPTAN1-228ENST00000635853 SASS6Q6UVJ0 657 aa12.02□□□□□ -0.49
SPTAN1-228ENST00000635853 NLRP13Q86W25 1043 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms