RNA–Protein interactions for RNA: ENST00000635761.1

CLN5-204, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 4

Gene CLN5, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-204ENST00000635761 CARMIL2Q6F5E8 1435 aa12.46□□□□□ -0.41
CLN5-204ENST00000635761 LHX8Q68G74 356 aa12.46□□□□□ -0.41
CLN5-204ENST00000635761 MAP3K4Q9Y6R4 1608 aa12.46□□□□□ -0.41
CLN5-204ENST00000635761 ABCC2Q92887 1545 aa12.46□□□□□ -0.42
CLN5-204ENST00000635761 ZCCHC11Q5TAX3 1644 aaKnown RBP12.45□□□□□ -0.42
CLN5-204ENST00000635761 MAMSTRQ6ZN01 415 aa12.45□□□□□ -0.42
CLN5-204ENST00000635761 TNIKQ9UKE5 1360 aa12.44□□□□□ -0.42
CLN5-204ENST00000635761 DISP1Q96F81 1524 aa12.44□□□□□ -0.42
CLN5-204ENST00000635761 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
CLN5-204ENST00000635761 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
CLN5-204ENST00000635761 UHRF1BP1LA0JNW5 1464 aa12.44□□□□□ -0.42
CLN5-204ENST00000635761 KDM4FA0A1W2PPD8 638 aa12.43□□□□□ -0.42
CLN5-204ENST00000635761 SCUBE2Q9NQ36 999 aa12.42□□□□□ -0.42
CLN5-204ENST00000635761 ASXL2Q76L83 1435 aa12.42□□□□□ -0.42
CLN5-204ENST00000635761 UGGT2Q9NYU1 1516 aa12.42□□□□□ -0.42
CLN5-204ENST00000635761 PLB1Q6P1J6 1458 aa12.41□□□□□ -0.42
CLN5-204ENST00000635761 TTBK1Q5TCY1 1321 aaPredicted RBP12.4□□□□□ -0.42
CLN5-204ENST00000635761 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.4□□□□□ -0.42
CLN5-204ENST00000635761 KDM5BQ9UGL1 1544 aa12.4□□□□□ -0.42
CLN5-204ENST00000635761 KIAA0556O60303 1618 aa12.4□□□□□ -0.42
CLN5-204ENST00000635761 UACAQ9BZF9 1416 aa12.39□□□□□ -0.43
CLN5-204ENST00000635761 RAPGEF2Q9Y4G8 1499 aa12.39□□□□□ -0.43
CLN5-204ENST00000635761 CFAP43Q8NDM7 1665 aa12.36□□□□□ -0.43
CLN5-204ENST00000635761 EPRSP07814 1512 aaKnown RBP12.36□□□□□ -0.43
CLN5-204ENST00000635761 HAP1P54257 671 aaPredicted RBP12.34□□□□□ -0.43
CLN5-204ENST00000635761 COL17A1Q9UMD9 1497 aaPredicted RBP12.34□□□□□ -0.43
CLN5-204ENST00000635761 TSHZ2Q9NRE2 1034 aa12.33□□□□□ -0.44
CLN5-204ENST00000635761 OTUD5Q96G74 571 aa12.32□□□□□ -0.44
CLN5-204ENST00000635761 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
CLN5-204ENST00000635761 ABCA8O94911 1581 aa12.3□□□□□ -0.44
CLN5-204ENST00000635761 TEX14Q8IWB6 1497 aa12.3□□□□□ -0.44
CLN5-204ENST00000635761 TMC2Q8TDI7 906 aa12.3□□□□□ -0.44
CLN5-204ENST00000635761 ADGRL1O94910 1474 aa12.29□□□□□ -0.44
CLN5-204ENST00000635761 SLAIN1Q8ND83 568 aa12.29□□□□□ -0.44
CLN5-204ENST00000635761 TMEM92Q6UXU6 159 aa12.28□□□□□ -0.44
CLN5-204ENST00000635761 WDR7Q9Y4E6 1490 aa12.27□□□□□ -0.44
CLN5-204ENST00000635761 CRISPLD2Q9H0B8 497 aa12.27□□□□□ -0.45
CLN5-204ENST00000635761 GOLGA3Q08378 1498 aa12.27□□□□□ -0.45
CLN5-204ENST00000635761 PDE4AP27815 886 aa12.26□□□□□ -0.45
CLN5-204ENST00000635761 NCKAP5LQ9HCH0 1330 aa12.26□□□□□ -0.45
CLN5-204ENST00000635761 C2orf72A6NCS6 295 aa12.25□□□□□ -0.45
CLN5-204ENST00000635761 KIF3CO14782 793 aa12.25□□□□□ -0.45
CLN5-204ENST00000635761 GPHNQ9NQX3 736 aaPredicted RBP12.25□□□□□ -0.45
CLN5-204ENST00000635761 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
CLN5-204ENST00000635761 PRXQ9BXM0 1461 aa12.24□□□□□ -0.45
CLN5-204ENST00000635761 KIF21BO75037 1637 aa12.23□□□□□ -0.45
CLN5-204ENST00000635761 CD109Q6YHK3 1445 aa12.21□□□□□ -0.45
CLN5-204ENST00000635761 LARP6Q9BRS8 491 aaKnown RBP12.21□□□□□ -0.45
CLN5-204ENST00000635761 HECW2Q9P2P5 1572 aa12.21□□□□□ -0.46
CLN5-204ENST00000635761 ABCA9Q8IUA7 1624 aa12.2□□□□□ -0.46
CLN5-204ENST00000635761 KCNH8Q96L42 1107 aa12.2□□□□□ -0.46
CLN5-204ENST00000635761 SAMD9Q5K651 1589 aa12.2□□□□□ -0.46
CLN5-204ENST00000635761 FOXK1P85037 733 aa12.19□□□□□ -0.46
CLN5-204ENST00000635761 MFSD10Q14728 455 aa12.19□□□□□ -0.46
CLN5-204ENST00000635761 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
CLN5-204ENST00000635761 ARAP3Q8WWN8 1544 aa12.17□□□□□ -0.46
CLN5-204ENST00000635761 RAPGEF6Q8TEU7 1601 aa12.17□□□□□ -0.46
CLN5-204ENST00000635761 ATP10BO94823 1461 aa12.16□□□□□ -0.46
CLN5-204ENST00000635761 DSG2Q14126 1118 aa12.16□□□□□ -0.46
CLN5-204ENST00000635761 PPP1R15BQ5SWA1 713 aa12.16□□□□□ -0.46
CLN5-204ENST00000635761 VSIG10Q8N0Z9 540 aa12.16□□□□□ -0.46
CLN5-204ENST00000635761 WDR70Q9NW82 654 aa12.16□□□□□ -0.46
CLN5-204ENST00000635761 ADAMTSL3P82987 1691 aa12.15□□□□□ -0.46
CLN5-204ENST00000635761 PLPP6Q8IY26 295 aa12.14□□□□□ -0.47
CLN5-204ENST00000635761 SNPHO15079 494 aa12.13□□□□□ -0.47
CLN5-204ENST00000635761 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
CLN5-204ENST00000635761 RICTORQ6R327 1708 aa12.13□□□□□ -0.47
CLN5-204ENST00000635761 BCORL1Q5H9F3 1711 aa12.11□□□□□ -0.47
CLN5-204ENST00000635761 P3H3Q8IVL6 736 aa12.11□□□□□ -0.47
CLN5-204ENST00000635761 FAM9AQ8IZU1 332 aaPredicted RBP12.11□□□□□ -0.47
CLN5-204ENST00000635761 PHLDB1Q86UU1 1377 aa12.09□□□□□ -0.47
CLN5-204ENST00000635761 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
CLN5-204ENST00000635761 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
CLN5-204ENST00000635761 KDM2AQ9Y2K7 1162 aa12.09□□□□□ -0.47
CLN5-204ENST00000635761 FRMPD1Q5SYB0 1578 aa12.09□□□□□ -0.47
CLN5-204ENST00000635761 ARID3CA6NKF2 412 aa12.07□□□□□ -0.48
CLN5-204ENST00000635761 NEO1Q92859 1461 aa12.07□□□□□ -0.48
CLN5-204ENST00000635761 HOXB3P14651 431 aaPredicted RBP12.06□□□□□ -0.48
CLN5-204ENST00000635761 NUP153P49790 1475 aaKnown RBP12.06□□□□□ -0.48
CLN5-204ENST00000635761 RIMBP2O15034 1052 aa12.05□□□□□ -0.48
CLN5-204ENST00000635761 SLC34A2O95436 690 aa12.05□□□□□ -0.48
CLN5-204ENST00000635761 CFAP74Q9C0B2 1584 aa12.05□□□□□ -0.48
CLN5-204ENST00000635761 MADDQ8WXG6 1647 aa12.04□□□□□ -0.48
CLN5-204ENST00000635761 SIGLEC1Q9BZZ2 1709 aa12.04□□□□□ -0.48
CLN5-204ENST00000635761 CAMK2BQ13554 666 aa12.04□□□□□ -0.48
CLN5-204ENST00000635761 E2F4Q16254 413 aa12.04□□□□□ -0.48
CLN5-204ENST00000635761 RIMS1Q86UR5 1692 aaKnown RBP12.03□□□□□ -0.48
CLN5-204ENST00000635761 RAPGEF3O95398 923 aa12.03□□□□□ -0.48
CLN5-204ENST00000635761 PTPRMP28827 1452 aa12.02□□□□□ -0.48
CLN5-204ENST00000635761 ZNF710Q8N1W2 664 aa12.02□□□□□ -0.49
CLN5-204ENST00000635761 LRRIQ1Q96JM4 1722 aa12.02□□□□□ -0.49
CLN5-204ENST00000635761 MYO5CQ9NQX4 1742 aa12.02□□□□□ -0.49
CLN5-204ENST00000635761 EEA1Q15075 1411 aa12.02□□□□□ -0.49
CLN5-204ENST00000635761 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLN5-204ENST00000635761 ZSWIM6Q9HCJ5 1215 aa12.01□□□□□ -0.49
CLN5-204ENST00000635761 TTC37Q6PGP7 1564 aa12.01□□□□□ -0.49
CLN5-204ENST00000635761 FER1L4A9Z1Z3 1794 aa12□□□□□ -0.49
CLN5-204ENST00000635761 PTCD2Q8WV60 388 aaKnown RBP12□□□□□ -0.49
CLN5-204ENST00000635761 EFCAB5A4FU69 1503 aa12□□□□□ -0.49
CLN5-204ENST00000635761 FHOD3Q2V2M9 1422 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms