RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 ZNF142P52746 1687 aaPredicted RBP22.94■■□□□ 1.26
HSPG2-214ENST00000635682 WASHC2CQ9Y4E1 1318 aa22.93■■□□□ 1.26
HSPG2-214ENST00000635682 ARHGEF5Q12774 1597 aa22.93■■□□□ 1.26
HSPG2-214ENST00000635682 PKD2Q13563 968 aa22.92■■□□□ 1.26
HSPG2-214ENST00000635682 ZNF335Q9H4Z2 1342 aaPredicted RBP22.91■■□□□ 1.26
HSPG2-214ENST00000635682 A2ML1A8K2U0 1454 aa22.89■■□□□ 1.25
HSPG2-214ENST00000635682 PLA2R1Q13018 1463 aa22.89■■□□□ 1.25
HSPG2-214ENST00000635682 TNRQ92752 1358 aa22.89■■□□□ 1.25
HSPG2-214ENST00000635682 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
HSPG2-214ENST00000635682 TCOF1Q13428 1488 aaKnown RBP22.87■■□□□ 1.25
HSPG2-214ENST00000635682 DNMT1P26358 1616 aaKnown RBP22.86■■□□□ 1.25
HSPG2-214ENST00000635682 PZPP20742 1482 aa22.85■■□□□ 1.25
HSPG2-214ENST00000635682 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
HSPG2-214ENST00000635682 IQSEC2Q5JU85 1478 aa22.81■■□□□ 1.24
HSPG2-214ENST00000635682 FAM135AQ9P2D6 1515 aa22.81■■□□□ 1.24
HSPG2-214ENST00000635682 MIA2Q96PC5 1412 aa22.81■■□□□ 1.24
HSPG2-214ENST00000635682 MAST1Q9Y2H9 1570 aa22.8■■□□□ 1.24
HSPG2-214ENST00000635682 UBAP1LF5GYI3 381 aa22.78■■□□□ 1.24
HSPG2-214ENST00000635682 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.77■■□□□ 1.24
HSPG2-214ENST00000635682 CFAP65Q6ZU64 1925 aaKnown RBP22.76■■□□□ 1.23
HSPG2-214ENST00000635682 DISP3Q9P2K9 1392 aa22.76■■□□□ 1.23
HSPG2-214ENST00000635682 RNF17Q9BXT8 1623 aaKnown RBP22.76■■□□□ 1.23
HSPG2-214ENST00000635682 THEMISQ8N1K5 641 aaPredicted RBP22.76■■□□□ 1.23
HSPG2-214ENST00000635682 ANKLE2Q86XL3 938 aa22.75■■□□□ 1.23
HSPG2-214ENST00000635682 ABCC3O15438 1527 aa22.75■■□□□ 1.23
HSPG2-214ENST00000635682 POLR1AO95602 1720 aaPredicted RBP22.74■■□□□ 1.23
HSPG2-214ENST00000635682 NEURL4Q96JN8 1562 aa22.73■■□□□ 1.23
HSPG2-214ENST00000635682 RRP7BPQ9NSQ0 103 aa22.73■■□□□ 1.23
HSPG2-214ENST00000635682 NLRP1Q9C000 1473 aa22.73■■□□□ 1.23
HSPG2-214ENST00000635682 UGGT1Q9NYU2 1555 aa22.72■■□□□ 1.23
HSPG2-214ENST00000635682 EIF2AK4Q9P2K8 1649 aaKnown RBP22.71■■□□□ 1.23
HSPG2-214ENST00000635682 ABCC5O15440 1437 aa22.71■■□□□ 1.23
HSPG2-214ENST00000635682 MROH1Q8NDA8 1641 aa22.71■■□□□ 1.23
HSPG2-214ENST00000635682 DUOX2Q9NRD8 1548 aa22.7■■□□□ 1.22
HSPG2-214ENST00000635682 CEP152O94986 1710 aa22.7■■□□□ 1.22
HSPG2-214ENST00000635682 PTPN23Q9H3S7 1636 aa22.69■■□□□ 1.22
HSPG2-214ENST00000635682 FGD6Q6ZV73 1430 aa22.69■■□□□ 1.22
HSPG2-214ENST00000635682 KIF15Q9NS87 1388 aa22.69■■□□□ 1.22
HSPG2-214ENST00000635682 ZC3H13Q5T200 1668 aaKnown RBP22.68■■□□□ 1.22
HSPG2-214ENST00000635682 ILDR2Q71H61 639 aa22.68■■□□□ 1.22
HSPG2-214ENST00000635682 PPARGC1BQ86YN6 1023 aaKnown RBP22.68■■□□□ 1.22
HSPG2-214ENST00000635682 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
HSPG2-214ENST00000635682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.67■■□□□ 1.22
HSPG2-214ENST00000635682 CHIC2Q9UKJ5 165 aa22.67■■□□□ 1.22
HSPG2-214ENST00000635682 SPATA31D1Q6ZQQ2 1576 aa22.67■■□□□ 1.22
HSPG2-214ENST00000635682 ERVK-7P63135 1459 aa22.66■■□□□ 1.22
HSPG2-214ENST00000635682 SHANK2Q9UPX8 1470 aa22.66■■□□□ 1.22
HSPG2-214ENST00000635682 NPHP4O75161 1426 aaPredicted RBP22.65■■□□□ 1.22
HSPG2-214ENST00000635682 CROCC2H7BZ55 1655 aa22.65■■□□□ 1.22
HSPG2-214ENST00000635682 DAPK1P53355 1430 aa22.64■■□□□ 1.21
HSPG2-214ENST00000635682 SCAF1Q9H7N4 1312 aaKnown RBP22.62■■□□□ 1.21
HSPG2-214ENST00000635682 MED14O60244 1454 aa22.61■■□□□ 1.21
HSPG2-214ENST00000635682 DEPDC5O75140 1603 aa22.61■■□□□ 1.21
HSPG2-214ENST00000635682 PIP4K2BP78356 416 aa22.61■■□□□ 1.21
HSPG2-214ENST00000635682 CPS1P31327 1500 aa22.61■■□□□ 1.21
HSPG2-214ENST00000635682 VWDEQ8N2E2 1590 aa22.6■■□□□ 1.21
HSPG2-214ENST00000635682 ERBINQ96RT1 1412 aa22.6■■□□□ 1.21
HSPG2-214ENST00000635682 IQGAP1P46940 1657 aa22.58■■□□□ 1.2
HSPG2-214ENST00000635682 PRDM15P57071 1507 aaPredicted RBP22.57■■□□□ 1.2
HSPG2-214ENST00000635682 TOM1O60784 492 aa22.57■■□□□ 1.2
HSPG2-214ENST00000635682 UBR1Q8IWV7 1749 aa22.57■■□□□ 1.2
HSPG2-214ENST00000635682 ANKRD30AQ9BXX3 1397 aa22.56■■□□□ 1.2
HSPG2-214ENST00000635682 ARHGAP31Q2M1Z3 1444 aa22.55■■□□□ 1.2
HSPG2-214ENST00000635682 KANK1Q14678 1352 aa22.54■■□□□ 1.2
HSPG2-214ENST00000635682 LTKP29376 864 aa22.54■■□□□ 1.2
HSPG2-214ENST00000635682 HSPA1LP34931 641 aa22.54■■□□□ 1.2
HSPG2-214ENST00000635682 TXNDC2Q86VQ3 553 aa22.54■■□□□ 1.2
HSPG2-214ENST00000635682 STRCP1A6NGW2 1772 aa22.52■■□□□ 1.2
HSPG2-214ENST00000635682 SCAF11Q99590 1463 aaKnown RBP22.5■■□□□ 1.19
HSPG2-214ENST00000635682 STAG3Q9UJ98 1225 aa22.5■■□□□ 1.19
HSPG2-214ENST00000635682 SOCS7O14512 581 aa22.48■■□□□ 1.19
HSPG2-214ENST00000635682 IDI1Q13907 227 aa22.48■■□□□ 1.19
HSPG2-214ENST00000635682 PIK3C2BO00750 1634 aa22.47■■□□□ 1.19
HSPG2-214ENST00000635682 EID1Q9Y6B2 187 aa22.47■■□□□ 1.19
HSPG2-214ENST00000635682 ARHGAP23Q9P227 1491 aa22.47■■□□□ 1.19
HSPG2-214ENST00000635682 LRRC7Q96NW7 1537 aa22.47■■□□□ 1.19
HSPG2-214ENST00000635682 ITGAEP38570 1179 aa22.46■■□□□ 1.19
HSPG2-214ENST00000635682 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
HSPG2-214ENST00000635682 SLIT1O75093 1534 aa22.46■■□□□ 1.19
HSPG2-214ENST00000635682 LMTK2Q8IWU2 1503 aa22.44■■□□□ 1.18
HSPG2-214ENST00000635682 ALKQ9UM73 1620 aa22.44■■□□□ 1.18
HSPG2-214ENST00000635682 ADGRL2O95490 1459 aa22.43■■□□□ 1.18
HSPG2-214ENST00000635682 TMEM2Q9UHN6 1383 aa22.43■■□□□ 1.18
HSPG2-214ENST00000635682 SYNMO15061 1565 aa22.4■■□□□ 1.18
HSPG2-214ENST00000635682 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
HSPG2-214ENST00000635682 EFCAB6Q5THR3 1501 aa22.38■■□□□ 1.17
HSPG2-214ENST00000635682 NOS1P29475 1434 aa22.38■■□□□ 1.17
HSPG2-214ENST00000635682 SLC26A8Q96RN1 970 aa22.36■■□□□ 1.17
HSPG2-214ENST00000635682 RRBP1Q9P2E9 1410 aaKnown RBP22.35■■□□□ 1.17
HSPG2-214ENST00000635682 SLC52A1Q9NWF4 448 aa22.34■■□□□ 1.17
HSPG2-214ENST00000635682 KDM5AP29375 1690 aaKnown RBP22.33■■□□□ 1.17
HSPG2-214ENST00000635682 XIRP1Q702N8 1843 aaKnown RBP22.33■■□□□ 1.16
HSPG2-214ENST00000635682 MED1Q15648 1581 aaPredicted RBP22.33■■□□□ 1.16
HSPG2-214ENST00000635682 BCANQ96GW7 911 aa22.32■■□□□ 1.16
HSPG2-214ENST00000635682 ROCK1Q13464 1354 aa22.31■■□□□ 1.16
HSPG2-214ENST00000635682 RBM33Q96EV2 1170 aaKnown RBP22.31■■□□□ 1.16
HSPG2-214ENST00000635682 ADGRB3O60242 1522 aa22.31■■□□□ 1.16
HSPG2-214ENST00000635682 KCNA6P17658 529 aa22.3■■□□□ 1.16
HSPG2-214ENST00000635682 TET3O43151 1660 aa22.29■■□□□ 1.16
HSPG2-214ENST00000635682 PROSER2Q86WR7 435 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms