RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 PRDM2Q13029 1718 aa12.24□□□□□ -0.45
SMARCA2-244ENST00000635659 TTLL12Q14166 644 aaPredicted RBP12.24□□□□□ -0.45
SMARCA2-244ENST00000635659 C1orf115Q9H7X2 142 aa12.24□□□□□ -0.45
SMARCA2-244ENST00000635659 PODXL2Q9NZ53 605 aa12.24□□□□□ -0.45
SMARCA2-244ENST00000635659 DDX12PQ92771 950 aa12.23□□□□□ -0.45
SMARCA2-244ENST00000635659 ONECUT3O60422 494 aaPredicted RBP12.22□□□□□ -0.45
SMARCA2-244ENST00000635659 CLCN6P51797 869 aa12.22□□□□□ -0.45
SMARCA2-244ENST00000635659 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
SMARCA2-244ENST00000635659 PTGDRQ13258 359 aa12.22□□□□□ -0.45
SMARCA2-244ENST00000635659 CADPSQ9ULU8 1353 aa12.21□□□□□ -0.45
SMARCA2-244ENST00000635659 TBC1D12O60347 775 aa12.21□□□□□ -0.45
SMARCA2-244ENST00000635659 GIGYF2Q6Y7W6 1299 aaKnown RBP12.2□□□□□ -0.46
SMARCA2-244ENST00000635659 PDS5BQ9NTI5 1447 aa12.19□□□□□ -0.46
SMARCA2-244ENST00000635659 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
SMARCA2-244ENST00000635659 PCMTD1Q96MG8 357 aaPredicted RBP12.18□□□□□ -0.46
SMARCA2-244ENST00000635659 ARID3AQ99856 593 aa12.18□□□□□ -0.46
SMARCA2-244ENST00000635659 CFTRP13569 1480 aa12.17□□□□□ -0.46
SMARCA2-244ENST00000635659 EVI5O60447 810 aa12.17□□□□□ -0.46
SMARCA2-244ENST00000635659 MS4A1P11836 297 aa12.17□□□□□ -0.46
SMARCA2-244ENST00000635659 L3MBTL3Q96JM7 780 aaPredicted RBP12.17□□□□□ -0.46
SMARCA2-244ENST00000635659 WDR62O43379 1518 aa12.16□□□□□ -0.46
SMARCA2-244ENST00000635659 ATMINO43313 823 aaPredicted RBP12.16□□□□□ -0.46
SMARCA2-244ENST00000635659 TMEM92Q6UXU6 159 aa12.16□□□□□ -0.46
SMARCA2-244ENST00000635659 A6NJR5 290 aa12.15□□□□□ -0.46
SMARCA2-244ENST00000635659 APBB1O00213 710 aa12.15□□□□□ -0.46
SMARCA2-244ENST00000635659 PLCG2P16885 1265 aa12.15□□□□□ -0.46
SMARCA2-244ENST00000635659 ASTLQ6HA08 431 aaPredicted RBP12.15□□□□□ -0.46
SMARCA2-244ENST00000635659 ARID3CA6NKF2 412 aa12.14□□□□□ -0.47
SMARCA2-244ENST00000635659 MRC2Q9UBG0 1479 aa12.14□□□□□ -0.47
SMARCA2-244ENST00000635659 GABBR2O75899 941 aa12.13□□□□□ -0.47
SMARCA2-244ENST00000635659 SH3D19Q5HYK7 790 aa12.13□□□□□ -0.47
SMARCA2-244ENST00000635659 REPIN1Q9BWE0 567 aaKnown RBP12.12□□□□□ -0.47
SMARCA2-244ENST00000635659 CEP164Q9UPV0 1460 aa12.12□□□□□ -0.47
SMARCA2-244ENST00000635659 FANCD2Q9BXW9 1451 aa12.11□□□□□ -0.47
SMARCA2-244ENST00000635659 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
SMARCA2-244ENST00000635659 CLCN1P35523 988 aa12.1□□□□□ -0.47
SMARCA2-244ENST00000635659 TRIM26Q12899 539 aaPredicted RBP12.1□□□□□ -0.47
SMARCA2-244ENST00000635659 CCDC88BA6NC98 1476 aa12.09□□□□□ -0.47
SMARCA2-244ENST00000635659 PTCD2Q8WV60 388 aaKnown RBP12.09□□□□□ -0.47
SMARCA2-244ENST00000635659 EN1Q05925 392 aaPredicted RBP12.08□□□□□ -0.48
SMARCA2-244ENST00000635659 ANO8Q9HCE9 1232 aaPredicted RBP12.08□□□□□ -0.48
SMARCA2-244ENST00000635659 TRAK2O60296 914 aa12.07□□□□□ -0.48
SMARCA2-244ENST00000635659 MCM6Q14566 821 aa12.07□□□□□ -0.48
SMARCA2-244ENST00000635659 GPCPD1Q9NPB8 672 aa12.07□□□□□ -0.48
SMARCA2-244ENST00000635659 CLUAP1Q96AJ1 413 aa12.06□□□□□ -0.48
SMARCA2-244ENST00000635659 EPAS1Q99814 870 aa12.06□□□□□ -0.48
SMARCA2-244ENST00000635659 CDHR5Q9HBB8 845 aa12.06□□□□□ -0.48
SMARCA2-244ENST00000635659 NPDC1Q9NQX5 325 aaPredicted RBP12.06□□□□□ -0.48
SMARCA2-244ENST00000635659 PHF14O94880 888 aa12.05□□□□□ -0.48
SMARCA2-244ENST00000635659 URB2Q14146 1524 aaKnown RBP12.05□□□□□ -0.48
SMARCA2-244ENST00000635659 SKIV2LQ15477 1246 aaKnown RBP12.03□□□□□ -0.48
SMARCA2-244ENST00000635659 SLC34A2O95436 690 aa12.02□□□□□ -0.49
SMARCA2-244ENST00000635659 MDM2Q00987 491 aaPredicted RBP12.02□□□□□ -0.49
SMARCA2-244ENST00000635659 MAP3K7O43318 606 aa12.01□□□□□ -0.49
SMARCA2-244ENST00000635659 HRCP23327 699 aa12.01□□□□□ -0.49
SMARCA2-244ENST00000635659 CCDC82Q8N4S0 544 aa12.01□□□□□ -0.49
SMARCA2-244ENST00000635659 SSTR3P32745 418 aaPredicted RBP12□□□□□ -0.49
SMARCA2-244ENST00000635659 PHOX2BQ99453 314 aa12□□□□□ -0.49
SMARCA2-244ENST00000635659 SEC24BO95487 1268 aa11.97□□□□□ -0.49
SMARCA2-244ENST00000635659 PROSER2Q86WR7 435 aaPredicted RBP11.97□□□□□ -0.49
SMARCA2-244ENST00000635659 BEGAINQ9BUH8 593 aa11.97□□□□□ -0.49
SMARCA2-244ENST00000635659 SLAIN1Q8ND83 568 aa11.96□□□□□ -0.49
SMARCA2-244ENST00000635659 FAM217BQ9NTX9 383 aaPredicted RBP11.96□□□□□ -0.49
SMARCA2-244ENST00000635659 PCDHGA10Q9Y5H3 936 aa11.96□□□□□ -0.49
SMARCA2-244ENST00000635659 TYW1BQ6NUM6 668 aa11.95□□□□□ -0.5
SMARCA2-244ENST00000635659 COLQQ9Y215 455 aaPredicted RBP11.95□□□□□ -0.5
SMARCA2-244ENST00000635659 PDIA4P13667 645 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-244ENST00000635659 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-244ENST00000635659 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-244ENST00000635659 DNMBPQ6XZF7 1577 aa11.93□□□□□ -0.5
SMARCA2-244ENST00000635659 TOPBP1Q92547 1522 aa11.93□□□□□ -0.5
SMARCA2-244ENST00000635659 OATP04181 439 aa11.93□□□□□ -0.5
SMARCA2-244ENST00000635659 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
SMARCA2-244ENST00000635659 METTL3Q86U44 580 aaKnown RBP11.93□□□□□ -0.5
SMARCA2-244ENST00000635659 PROCA1Q8NCQ7 364 aaPredicted RBP11.92□□□□□ -0.5
SMARCA2-244ENST00000635659 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
SMARCA2-244ENST00000635659 RAD21O60216 631 aa11.91□□□□□ -0.5
SMARCA2-244ENST00000635659 C3orf67Q6ZVT6 689 aa11.91□□□□□ -0.5
SMARCA2-244ENST00000635659 FNBP4Q8N3X1 1017 aaPredicted RBP11.91□□□□□ -0.5
SMARCA2-244ENST00000635659 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMARCA2-244ENST00000635659 CERKQ8TCT0 537 aa11.9□□□□□ -0.5
SMARCA2-244ENST00000635659 SPDYE5A6NIY4 337 aa11.89□□□□□ -0.51
SMARCA2-244ENST00000635659 MYSM1Q5VVJ2 828 aa11.89□□□□□ -0.51
SMARCA2-244ENST00000635659 JPH4Q96JJ6 628 aa11.89□□□□□ -0.51
SMARCA2-244ENST00000635659 PXYLP1Q8TE99 480 aa11.88□□□□□ -0.51
SMARCA2-244ENST00000635659 SLC39A7Q92504 469 aa11.88□□□□□ -0.51
SMARCA2-244ENST00000635659 POM121Q96HA1 1249 aa11.88□□□□□ -0.51
SMARCA2-244ENST00000635659 POLR3EQ9NVU0 708 aa11.88□□□□□ -0.51
SMARCA2-244ENST00000635659 ATP1B4Q9UN42 357 aaPredicted RBP11.88□□□□□ -0.51
SMARCA2-244ENST00000635659 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-244ENST00000635659 CLK2P49760 499 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-244ENST00000635659 PELP1Q8IZL8 1130 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-244ENST00000635659 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-244ENST00000635659 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
SMARCA2-244ENST00000635659 ADGRG1Q9Y653 693 aa11.87□□□□□ -0.51
SMARCA2-244ENST00000635659 EIF4G3O43432 1585 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-244ENST00000635659 ZBTB7CA1YPR0 619 aa11.86□□□□□ -0.51
SMARCA2-244ENST00000635659 POTEIP0CG38 1075 aa11.86□□□□□ -0.51
SMARCA2-244ENST00000635659 FAM161AQ3B820 660 aa11.86□□□□□ -0.51
SMARCA2-244ENST00000635659 PADI6Q6TGC4 694 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms