RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 RSPH4AQ5TD94 716 aa24.42■■□□□ 1.5
LINC00339-209ENST00000635450 EIF2AK4Q9P2K8 1649 aaKnown RBP24.41■■□□□ 1.5
LINC00339-209ENST00000635450 FAM135AQ9P2D6 1515 aa24.4■■□□□ 1.5
LINC00339-209ENST00000635450 CEP152O94986 1710 aa24.39■■□□□ 1.5
LINC00339-209ENST00000635450 DNMT1P26358 1616 aaKnown RBP24.39■■□□□ 1.49
LINC00339-209ENST00000635450 PTPRTO14522 1441 aa24.38■■□□□ 1.49
LINC00339-209ENST00000635450 PZPP20742 1482 aa24.38■■□□□ 1.49
LINC00339-209ENST00000635450 TSPY4P0CV99 314 aa24.37■■□□□ 1.49
LINC00339-209ENST00000635450 TSPY10P0CW01 314 aa24.37■■□□□ 1.49
LINC00339-209ENST00000635450 PPP6R1Q9UPN7 881 aa24.37■■□□□ 1.49
LINC00339-209ENST00000635450 FGD6Q6ZV73 1430 aa24.36■■□□□ 1.49
LINC00339-209ENST00000635450 ABCC3O15438 1527 aa24.36■■□□□ 1.49
LINC00339-209ENST00000635450 CERKQ8TCT0 537 aa24.36■■□□□ 1.49
LINC00339-209ENST00000635450 ZC3H13Q5T200 1668 aaKnown RBP24.36■■□□□ 1.49
LINC00339-209ENST00000635450 ABCC5O15440 1437 aa24.35■■□□□ 1.49
LINC00339-209ENST00000635450 SHANK2Q9UPX8 1470 aa24.35■■□□□ 1.49
LINC00339-209ENST00000635450 TCOF1Q13428 1488 aaKnown RBP24.34■■□□□ 1.49
LINC00339-209ENST00000635450 FBXO31Q5XUX0 539 aaPredicted RBP24.34■■□□□ 1.49
LINC00339-209ENST00000635450 LTBP4Q8N2S1 1624 aa24.34■■□□□ 1.49
LINC00339-209ENST00000635450 A2ML1A8K2U0 1454 aa24.33■■□□□ 1.49
LINC00339-209ENST00000635450 PLA2R1Q13018 1463 aa24.32■■□□□ 1.48
LINC00339-209ENST00000635450 DUOX2Q9NRD8 1548 aa24.32■■□□□ 1.48
LINC00339-209ENST00000635450 DAPK1P53355 1430 aa24.32■■□□□ 1.48
LINC00339-209ENST00000635450 POLR1AO95602 1720 aaPredicted RBP24.31■■□□□ 1.48
LINC00339-209ENST00000635450 NCKAP5LQ9HCH0 1330 aa24.31■■□□□ 1.48
LINC00339-209ENST00000635450 TNRQ92752 1358 aa24.3■■□□□ 1.48
LINC00339-209ENST00000635450 DMRT2Q9Y5R5 561 aa24.3■■□□□ 1.48
LINC00339-209ENST00000635450 WASHC2CQ9Y4E1 1318 aa24.3■■□□□ 1.48
LINC00339-209ENST00000635450 CFAP65Q6ZU64 1925 aaKnown RBP24.29■■□□□ 1.48
LINC00339-209ENST00000635450 PRDM15P57071 1507 aaPredicted RBP24.28■■□□□ 1.48
LINC00339-209ENST00000635450 KIF15Q9NS87 1388 aa24.28■■□□□ 1.48
LINC00339-209ENST00000635450 NEURL4Q96JN8 1562 aa24.27■■□□□ 1.48
LINC00339-209ENST00000635450 DEPDC5O75140 1603 aa24.26■■□□□ 1.47
LINC00339-209ENST00000635450 SPATA31D1Q6ZQQ2 1576 aa24.25■■□□□ 1.47
LINC00339-209ENST00000635450 ERVK-7P63135 1459 aa24.22■■□□□ 1.47
LINC00339-209ENST00000635450 ERBINQ96RT1 1412 aa24.22■■□□□ 1.47
LINC00339-209ENST00000635450 RRP7BPQ9NSQ0 103 aa24.2■■□□□ 1.46
LINC00339-209ENST00000635450 UGGT1Q9NYU2 1555 aa24.19■■□□□ 1.46
LINC00339-209ENST00000635450 NLRP1Q9C000 1473 aa24.19■■□□□ 1.46
LINC00339-209ENST00000635450 ZNF335Q9H4Z2 1342 aaPredicted RBP24.18■■□□□ 1.46
LINC00339-209ENST00000635450 CHIC2Q9UKJ5 165 aa24.17■■□□□ 1.46
LINC00339-209ENST00000635450 PKD2Q13563 968 aa24.16■■□□□ 1.46
LINC00339-209ENST00000635450 UBR1Q8IWV7 1749 aa24.15■■□□□ 1.46
LINC00339-209ENST00000635450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.15■■□□□ 1.46
LINC00339-209ENST00000635450 ADGRL2O95490 1459 aa24.14■■□□□ 1.46
LINC00339-209ENST00000635450 VWDEQ8N2E2 1590 aa24.13■■□□□ 1.45
LINC00339-209ENST00000635450 ANKRD30AQ9BXX3 1397 aa24.11■■□□□ 1.45
LINC00339-209ENST00000635450 IQGAP1P46940 1657 aa24.09■■□□□ 1.45
LINC00339-209ENST00000635450 IQSEC2Q5JU85 1478 aa24.09■■□□□ 1.45
LINC00339-209ENST00000635450 FAM50AQ14320 339 aaKnown RBP24.09■■□□□ 1.45
LINC00339-209ENST00000635450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.08■■□□□ 1.452e-8■■■□□ 14.6
LINC00339-209ENST00000635450 ARHGAP31Q2M1Z3 1444 aa24.08■■□□□ 1.44
LINC00339-209ENST00000635450 PIK3C2BO00750 1634 aa24.07■■□□□ 1.44
LINC00339-209ENST00000635450 LMTK2Q8IWU2 1503 aa24.06■■□□□ 1.44
LINC00339-209ENST00000635450 SYNMO15061 1565 aa24.05■■□□□ 1.44
LINC00339-209ENST00000635450 STRCP1A6NGW2 1772 aa24.05■■□□□ 1.44
LINC00339-209ENST00000635450 EFCAB6Q5THR3 1501 aa24.05■■□□□ 1.44
LINC00339-209ENST00000635450 MED14O60244 1454 aa24.04■■□□□ 1.44
LINC00339-209ENST00000635450 NPHP4O75161 1426 aaPredicted RBP24.02■■□□□ 1.44
LINC00339-209ENST00000635450 PPARGC1BQ86YN6 1023 aaKnown RBP24.01■■□□□ 1.43
LINC00339-209ENST00000635450 THEMISQ8N1K5 641 aaPredicted RBP24.01■■□□□ 1.43
LINC00339-209ENST00000635450 ANKLE2Q86XL3 938 aa23.99■■□□□ 1.43
LINC00339-209ENST00000635450 KANK1Q14678 1352 aa23.99■■□□□ 1.43
LINC00339-209ENST00000635450 ANKRD50Q9ULJ7 1429 aa23.99■■□□□ 1.43
LINC00339-209ENST00000635450 UNC13BO14795 1591 aa23.99■■□□□ 1.43
LINC00339-209ENST00000635450 ARHGAP23Q9P227 1491 aa23.98■■□□□ 1.43
LINC00339-209ENST00000635450 SLIT1O75093 1534 aa23.97■■□□□ 1.43
LINC00339-209ENST00000635450 TET3O43151 1660 aa23.96■■□□□ 1.43
LINC00339-209ENST00000635450 CPS1P31327 1500 aa23.95■■□□□ 1.43
LINC00339-209ENST00000635450 SCAF11Q99590 1463 aaKnown RBP23.94■■□□□ 1.42
LINC00339-209ENST00000635450 MYO5BQ9ULV0 1848 aa23.94■■□□□ 1.42
LINC00339-209ENST00000635450 KDM5AP29375 1690 aaKnown RBP23.94■■□□□ 1.42
LINC00339-209ENST00000635450 GCC2Q8IWJ2 1684 aa23.94■■□□□ 1.42
LINC00339-209ENST00000635450 NOS1P29475 1434 aa23.93■■□□□ 1.42
LINC00339-209ENST00000635450 ADGRB3O60242 1522 aa23.91■■□□□ 1.42
LINC00339-209ENST00000635450 ALKQ9UM73 1620 aa23.91■■□□□ 1.42
LINC00339-209ENST00000635450 E9PCH4 1651 aa23.9■■□□□ 1.42
LINC00339-209ENST00000635450 LTKP29376 864 aa23.9■■□□□ 1.42
LINC00339-209ENST00000635450 UBAP1LF5GYI3 381 aa23.88■■□□□ 1.41
LINC00339-209ENST00000635450 IQGAP3Q86VI3 1631 aa23.88■■□□□ 1.41
LINC00339-209ENST00000635450 ROCK1Q13464 1354 aa23.87■■□□□ 1.41
LINC00339-209ENST00000635450 XIRP1Q702N8 1843 aaKnown RBP23.86■■□□□ 1.41
LINC00339-209ENST00000635450 IDI1Q13907 227 aa23.85■■□□□ 1.41
LINC00339-209ENST00000635450 TMEM2Q9UHN6 1383 aa23.85■■□□□ 1.41
LINC00339-209ENST00000635450 RPRD2Q5VT52 1461 aaKnown RBP23.85■■□□□ 1.41
LINC00339-209ENST00000635450 ITGAEP38570 1179 aa23.84■■□□□ 1.41
LINC00339-209ENST00000635450 LRRC7Q96NW7 1537 aa23.84■■□□□ 1.41
LINC00339-209ENST00000635450 TXNDC2Q86VQ3 553 aa23.82■■□□□ 1.4
LINC00339-209ENST00000635450 TMEM131LA2VDJ0 1609 aa23.8■■□□□ 1.4
LINC00339-209ENST00000635450 RRBP1Q9P2E9 1410 aaKnown RBP23.77■■□□□ 1.4
LINC00339-209ENST00000635450 STAG3Q9UJ98 1225 aa23.77■■□□□ 1.4
LINC00339-209ENST00000635450 ZFYVE9O95405 1425 aa23.74■■□□□ 1.39
LINC00339-209ENST00000635450 PIP4K2BP78356 416 aa23.73■■□□□ 1.39
LINC00339-209ENST00000635450 EID1Q9Y6B2 187 aa23.73■■□□□ 1.39
LINC00339-209ENST00000635450 SCAF1Q9H7N4 1312 aaKnown RBP23.73■■□□□ 1.39
LINC00339-209ENST00000635450 DISP3Q9P2K9 1392 aa23.73■■□□□ 1.39
LINC00339-209ENST00000635450 SPHKAPQ2M3C7 1700 aa23.71■■□□□ 1.39
LINC00339-209ENST00000635450 NWD1Q149M9 1564 aa23.7■■□□□ 1.38
LINC00339-209ENST00000635450 NUP155O75694 1391 aa23.7■■□□□ 1.38
LINC00339-209ENST00000635450 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms