RNA–Protein interactions for RNA: ENST00000634998.1

LINC01988-201, Transcript of long intergenic non-protein coding RNA 1988, humanhuman

TSL 3

Gene LINC01988, Length 811 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01988-201ENST00000634998 DAPK1P53355 1430 aa17.14■□□□□ 0.33
LINC01988-201ENST00000634998 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
LINC01988-201ENST00000634998 PPARGC1BQ86YN6 1023 aaKnown RBP17.12■□□□□ 0.33
LINC01988-201ENST00000634998 SHANK2Q9UPX8 1470 aa17.12■□□□□ 0.33
LINC01988-201ENST00000634998 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
LINC01988-201ENST00000634998 DNMT1P26358 1616 aaKnown RBP17.11■□□□□ 0.33
LINC01988-201ENST00000634998 PTPRKQ15262 1439 aa17.11■□□□□ 0.33
LINC01988-201ENST00000634998 ANKRD30AQ9BXX3 1397 aa17.1■□□□□ 0.33
LINC01988-201ENST00000634998 KIF15Q9NS87 1388 aa17.1■□□□□ 0.33
LINC01988-201ENST00000634998 FBXO31Q5XUX0 539 aaPredicted RBP17.09■□□□□ 0.33
LINC01988-201ENST00000634998 KDM5DQ9BY66 1539 aa17.09■□□□□ 0.33
LINC01988-201ENST00000634998 FAM135AQ9P2D6 1515 aa17.09■□□□□ 0.33
LINC01988-201ENST00000634998 CROCC2H7BZ55 1655 aa17.09■□□□□ 0.33
LINC01988-201ENST00000634998 EIF2AK4Q9P2K8 1649 aaKnown RBP17.08■□□□□ 0.32
LINC01988-201ENST00000634998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
LINC01988-201ENST00000634998 NCOA1Q15788 1441 aa17.05■□□□□ 0.32
LINC01988-201ENST00000634998 ERBINQ96RT1 1412 aa17.05■□□□□ 0.32
LINC01988-201ENST00000634998 RNF17Q9BXT8 1623 aaKnown RBP17.05■□□□□ 0.32
LINC01988-201ENST00000634998 ILDR1Q86SU0 546 aaPredicted RBP17.04■□□□□ 0.32
LINC01988-201ENST00000634998 STRCQ7RTU9 1775 aa17.04■□□□□ 0.32
LINC01988-201ENST00000634998 PZPP20742 1482 aa17.04■□□□□ 0.32
LINC01988-201ENST00000634998 TNRQ92752 1358 aa17.02■□□□□ 0.32
LINC01988-201ENST00000634998 KANK1Q14678 1352 aa17.02■□□□□ 0.31
LINC01988-201ENST00000634998 ZC3H13Q5T200 1668 aaKnown RBP17.01■□□□□ 0.31
LINC01988-201ENST00000634998 CAMSAP1Q5T5Y3 1602 aa17.01■□□□□ 0.31
LINC01988-201ENST00000634998 MYO3AQ8NEV4 1616 aa17.01■□□□□ 0.31
LINC01988-201ENST00000634998 ABCC3O15438 1527 aa17.01■□□□□ 0.31
LINC01988-201ENST00000634998 NCKAP5LQ9HCH0 1330 aa17■□□□□ 0.31
LINC01988-201ENST00000634998 ITGAEP38570 1179 aa17■□□□□ 0.31
LINC01988-201ENST00000634998 CEP170BQ9Y4F5 1589 aaPredicted RBP17■□□□□ 0.31
LINC01988-201ENST00000634998 ADGRL2O95490 1459 aa16.99■□□□□ 0.31
LINC01988-201ENST00000634998 PTPRTO14522 1441 aa16.99■□□□□ 0.31
LINC01988-201ENST00000634998 PKD2Q13563 968 aa16.99■□□□□ 0.31
LINC01988-201ENST00000634998 A2ML1A8K2U0 1454 aa16.99■□□□□ 0.31
LINC01988-201ENST00000634998 THEMISQ8N1K5 641 aaPredicted RBP16.98■□□□□ 0.31
LINC01988-201ENST00000634998 MROH1Q8NDA8 1641 aa16.98■□□□□ 0.31
LINC01988-201ENST00000634998 ZNF142P52746 1687 aaPredicted RBP16.97■□□□□ 0.31
LINC01988-201ENST00000634998 CEP152O94986 1710 aa16.97■□□□□ 0.31
LINC01988-201ENST00000634998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.97■□□□□ 0.31
LINC01988-201ENST00000634998 CFAP65Q6ZU64 1925 aaKnown RBP16.96■□□□□ 0.31
LINC01988-201ENST00000634998 CERKQ8TCT0 537 aa16.96■□□□□ 0.31
LINC01988-201ENST00000634998 FBXO41Q8TF61 875 aa16.96■□□□□ 0.31
LINC01988-201ENST00000634998 ANKRD50Q9ULJ7 1429 aa16.96■□□□□ 0.3
LINC01988-201ENST00000634998 PRDM15P57071 1507 aaPredicted RBP16.95■□□□□ 0.3
LINC01988-201ENST00000634998 PLA2R1Q13018 1463 aa16.94■□□□□ 0.3
LINC01988-201ENST00000634998 NLRP1Q9C000 1473 aa16.94■□□□□ 0.3
LINC01988-201ENST00000634998 DEPDC5O75140 1603 aa16.94■□□□□ 0.3
LINC01988-201ENST00000634998 ARHGAP31Q2M1Z3 1444 aa16.94■□□□□ 0.3
LINC01988-201ENST00000634998 ANKLE2Q86XL3 938 aa16.93■□□□□ 0.3
LINC01988-201ENST00000634998 ROCK1Q13464 1354 aa16.92■□□□□ 0.3
LINC01988-201ENST00000634998 SPATA31D1Q6ZQQ2 1576 aa16.92■□□□□ 0.3
LINC01988-201ENST00000634998 ERVK-7P63135 1459 aa16.92■□□□□ 0.3
LINC01988-201ENST00000634998 UGGT1Q9NYU2 1555 aa16.91■□□□□ 0.3
LINC01988-201ENST00000634998 LMTK2Q8IWU2 1503 aa16.88■□□□□ 0.29
LINC01988-201ENST00000634998 RRBP1Q9P2E9 1410 aaKnown RBP16.87■□□□□ 0.29
LINC01988-201ENST00000634998 VWDEQ8N2E2 1590 aa16.87■□□□□ 0.29
LINC01988-201ENST00000634998 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
LINC01988-201ENST00000634998 IDI1Q13907 227 aa16.84■□□□□ 0.29
LINC01988-201ENST00000634998 ZNF335Q9H4Z2 1342 aaPredicted RBP16.83■□□□□ 0.28
LINC01988-201ENST00000634998 SLC52A1Q9NWF4 448 aa16.83■□□□□ 0.28
LINC01988-201ENST00000634998 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
LINC01988-201ENST00000634998 NUP155O75694 1391 aa16.81■□□□□ 0.28
LINC01988-201ENST00000634998 TXNDC2Q86VQ3 553 aa16.81■□□□□ 0.28
LINC01988-201ENST00000634998 EID1Q9Y6B2 187 aa16.81■□□□□ 0.28
LINC01988-201ENST00000634998 UBR1Q8IWV7 1749 aa16.81■□□□□ 0.28
LINC01988-201ENST00000634998 LTBP4Q8N2S1 1624 aa16.81■□□□□ 0.28
LINC01988-201ENST00000634998 EFCAB6Q5THR3 1501 aa16.8■□□□□ 0.28
LINC01988-201ENST00000634998 RPRD2Q5VT52 1461 aaKnown RBP16.8■□□□□ 0.28
LINC01988-201ENST00000634998 NPHP4O75161 1426 aaPredicted RBP16.79■□□□□ 0.28
LINC01988-201ENST00000634998 NOS1P29475 1434 aa16.79■□□□□ 0.28
LINC01988-201ENST00000634998 UNC13BO14795 1591 aa16.79■□□□□ 0.28
LINC01988-201ENST00000634998 MED14O60244 1454 aa16.79■□□□□ 0.28
LINC01988-201ENST00000634998 NEURL4Q96JN8 1562 aa16.78■□□□□ 0.28
LINC01988-201ENST00000634998 TET3O43151 1660 aa16.78■□□□□ 0.28
LINC01988-201ENST00000634998 PIK3C2BO00750 1634 aa16.78■□□□□ 0.28
LINC01988-201ENST00000634998 LTKP29376 864 aa16.77■□□□□ 0.28
LINC01988-201ENST00000634998 GCC2Q8IWJ2 1684 aa16.75■□□□□ 0.27
LINC01988-201ENST00000634998 SYNMO15061 1565 aa16.75■□□□□ 0.27
LINC01988-201ENST00000634998 TMEM2Q9UHN6 1383 aa16.75■□□□□ 0.27
LINC01988-201ENST00000634998 SLIT1O75093 1534 aa16.75■□□□□ 0.27
LINC01988-201ENST00000634998 IQSEC2Q5JU85 1478 aa16.74■□□□□ 0.27
LINC01988-201ENST00000634998 HDGFP51858 240 aaKnown RBP16.74■□□□□ 0.27
LINC01988-201ENST00000634998 IQGAP3Q86VI3 1631 aa16.74■□□□□ 0.27
LINC01988-201ENST00000634998 ARHGAP23Q9P227 1491 aa16.73■□□□□ 0.27
LINC01988-201ENST00000634998 NAIPQ13075 1403 aa16.73■□□□□ 0.27
LINC01988-201ENST00000634998 KDM5AP29375 1690 aaKnown RBP16.73■□□□□ 0.27
LINC01988-201ENST00000634998 IQGAP1P46940 1657 aa16.73■□□□□ 0.27
LINC01988-201ENST00000634998 CHGAP10645 457 aaKnown RBP16.73■□□□□ 0.27
LINC01988-201ENST00000634998 SCAF11Q99590 1463 aaKnown RBP16.73■□□□□ 0.27
LINC01988-201ENST00000634998 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
LINC01988-201ENST00000634998 E9PCH4 1651 aa16.72■□□□□ 0.27
LINC01988-201ENST00000634998 BCANQ96GW7 911 aa16.7■□□□□ 0.26
LINC01988-201ENST00000634998 CPS1P31327 1500 aa16.69■□□□□ 0.26
LINC01988-201ENST00000634998 UBAP1LF5GYI3 381 aa16.68■□□□□ 0.26
LINC01988-201ENST00000634998 ADGRB3O60242 1522 aa16.68■□□□□ 0.26
LINC01988-201ENST00000634998 HFM1A2PYH4 1435 aa16.68■□□□□ 0.26
LINC01988-201ENST00000634998 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.66■□□□□ 0.26
LINC01988-201ENST00000634998 PPP1R15AO75807 674 aaPredicted RBP16.65■□□□□ 0.26
LINC01988-201ENST00000634998 SLC26A8Q96RN1 970 aa16.65■□□□□ 0.26
LINC01988-201ENST00000634998 TOM1O60784 492 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms