RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	NUP160	Q12769	1436 aa		11.52	□□□□□ -0.56
SMARCA2-223	ENST00000634435	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.52	□□□□□ -0.56
SMARCA2-223	ENST00000634435	ZMYND10	O75800	440 aa		11.52	□□□□□ -0.57
SMARCA2-223	ENST00000634435	CEP170	Q5SW79	1584 aa		11.51	□□□□□ -0.57
SMARCA2-223	ENST00000634435	SLC24A3	Q9HC58	644 aa		11.51	□□□□□ -0.57
SMARCA2-223	ENST00000634435	NEUROD2	Q15784	382 aa		11.49	□□□□□ -0.57
SMARCA2-223	ENST00000634435	GPHN	Q9NQX3	736 aa	Predicted RBP	11.49	□□□□□ -0.57
SMARCA2-223	ENST00000634435	FHAD1	B1AJZ9	1412 aa		11.49	□□□□□ -0.57
SMARCA2-223	ENST00000634435	TTLL13P	A6NNM8	815 aa		11.48	□□□□□ -0.57
SMARCA2-223	ENST00000634435	SEC24B	O95487	1268 aa		11.48	□□□□□ -0.57
SMARCA2-223	ENST00000634435	PPP1R15B	Q5SWA1	713 aa		11.48	□□□□□ -0.57
SMARCA2-223	ENST00000634435	SUPT5H	O00267	1087 aa	Known RBP	11.47	□□□□□ -0.57
SMARCA2-223	ENST00000634435	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.47	□□□□□ -0.57	2e-8	■■■■□ 21
SMARCA2-223	ENST00000634435	COLQ	Q9Y215	455 aa	Predicted RBP	11.47	□□□□□ -0.57
SMARCA2-223	ENST00000634435	BARGIN	Q6ZT62	677 aa		11.45	□□□□□ -0.58
SMARCA2-223	ENST00000634435	SHROOM2	Q13796	1616 aa		11.45	□□□□□ -0.58
SMARCA2-223	ENST00000634435	TOP2B	Q02880	1626 aa		11.44	□□□□□ -0.58
SMARCA2-223	ENST00000634435	ERICH3	Q5RHP9	1530 aa		11.44	□□□□□ -0.58
SMARCA2-223	ENST00000634435	PRG4	Q92954	1404 aa	Predicted RBP	11.43	□□□□□ -0.58
SMARCA2-223	ENST00000634435	BIVM-ERCC5	R4GMW8	1640 aa		11.42	□□□□□ -0.58
SMARCA2-223	ENST00000634435	CDAN1	Q8IWY9	1227 aa		11.41	□□□□□ -0.58
SMARCA2-223	ENST00000634435	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.4	□□□□□ -0.58
SMARCA2-223	ENST00000634435	IER5L	Q5T953	404 aa		11.4	□□□□□ -0.58
SMARCA2-223	ENST00000634435	C14orf37	Q86TY3	774 aa		11.4	□□□□□ -0.58
SMARCA2-223	ENST00000634435	GPIHBP1	Q8IV16	184 aa		11.4	□□□□□ -0.58
SMARCA2-223	ENST00000634435	TRIM35	Q9UPQ4	493 aa		11.4	□□□□□ -0.58
SMARCA2-223	ENST00000634435	MLLT3	P42568	568 aa	Predicted RBP	11.39	□□□□□ -0.59
SMARCA2-223	ENST00000634435	PDIA6	Q15084	440 aa		11.38	□□□□□ -0.59
SMARCA2-223	ENST00000634435	RBM26	Q5T8P6	1007 aa	Known RBP	11.38	□□□□□ -0.59
SMARCA2-223	ENST00000634435	JPH4	Q96JJ6	628 aa		11.38	□□□□□ -0.59
SMARCA2-223	ENST00000634435	FAM69C	Q0P6D2	419 aa		11.37	□□□□□ -0.59
SMARCA2-223	ENST00000634435	AK7	Q96M32	723 aa		11.37	□□□□□ -0.59
SMARCA2-223	ENST00000634435	RUSC2	Q8N2Y8	1516 aa		11.36	□□□□□ -0.59
SMARCA2-223	ENST00000634435	DPYSL4	O14531	572 aa		11.36	□□□□□ -0.59
SMARCA2-223	ENST00000634435	DSG2	Q14126	1118 aa		11.36	□□□□□ -0.59
SMARCA2-223	ENST00000634435	MICALL2	Q8IY33	904 aa		11.36	□□□□□ -0.59
SMARCA2-223	ENST00000634435	EMILIN3	Q9NT22	766 aa		11.36	□□□□□ -0.59
SMARCA2-223	ENST00000634435	DAXX	Q9UER7	740 aa	Predicted RBP	11.36	□□□□□ -0.59
SMARCA2-223	ENST00000634435	ABCC10	Q5T3U5	1492 aa		11.36	□□□□□ -0.59
SMARCA2-223	ENST00000634435	FOXK1	P85037	733 aa		11.35	□□□□□ -0.59
SMARCA2-223	ENST00000634435	TMC2	Q8TDI7	906 aa		11.35	□□□□□ -0.59
SMARCA2-223	ENST00000634435	KIF13A	Q9H1H9	1805 aa		11.35	□□□□□ -0.59
SMARCA2-223	ENST00000634435	SLAIN1	Q8ND83	568 aa		11.34	□□□□□ -0.59
SMARCA2-223	ENST00000634435	MAPKBP1	O60336	1514 aa		11.34	□□□□□ -0.59
SMARCA2-223	ENST00000634435	DPY19L2	Q6NUT2	758 aa		11.32	□□□□□ -0.6
SMARCA2-223	ENST00000634435	PDCD7	Q8N8D1	485 aa	Known RBP	11.32	□□□□□ -0.6
SMARCA2-223	ENST00000634435	ST18	O60284	1047 aa		11.31	□□□□□ -0.6
SMARCA2-223	ENST00000634435	KRI1	Q8N9T8	703 aa	Known RBP	11.31	□□□□□ -0.6
SMARCA2-223	ENST00000634435	DIP2B	Q9P265	1576 aa		11.31	□□□□□ -0.6
SMARCA2-223	ENST00000634435	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.3	□□□□□ -0.6
SMARCA2-223	ENST00000634435	ADCY10	Q96PN6	1610 aa		11.3	□□□□□ -0.6
SMARCA2-223	ENST00000634435	ARX	Q96QS3	562 aa		11.28	□□□□□ -0.6
SMARCA2-223	ENST00000634435	KIAA0586	Q9BVV6	1533 aa		11.28	□□□□□ -0.6
SMARCA2-223	ENST00000634435	PLCG2	P16885	1265 aa		11.27	□□□□□ -0.61
SMARCA2-223	ENST00000634435	KDM6B	O15054	1643 aa		11.27	□□□□□ -0.61
SMARCA2-223	ENST00000634435	IRX5	P78411	483 aa	Predicted RBP	11.26	□□□□□ -0.61
SMARCA2-223	ENST00000634435	PLPP6	Q8IY26	295 aa		11.26	□□□□□ -0.61
SMARCA2-223	ENST00000634435	OCEL1	Q9H607	264 aa		11.26	□□□□□ -0.61
SMARCA2-223	ENST00000634435	BOLA1	Q9Y3E2	137 aa		11.26	□□□□□ -0.61
SMARCA2-223	ENST00000634435	KIF27	Q86VH2	1401 aa		11.26	□□□□□ -0.61
SMARCA2-223	ENST00000634435	KIF3C	O14782	793 aa		11.25	□□□□□ -0.61
SMARCA2-223	ENST00000634435		G3V3G9	751 aa		11.24	□□□□□ -0.61
SMARCA2-223	ENST00000634435	IGF1R	P08069	1367 aa		11.24	□□□□□ -0.61
SMARCA2-223	ENST00000634435	C2orf72	A6NCS6	295 aa		11.23	□□□□□ -0.61
SMARCA2-223	ENST00000634435	TRIM66	O15016	1216 aa		11.23	□□□□□ -0.61
SMARCA2-223	ENST00000634435	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.23	□□□□□ -0.61
SMARCA2-223	ENST00000634435	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.23	□□□□□ -0.61
SMARCA2-223	ENST00000634435	PTPRG	P23470	1445 aa		11.23	□□□□□ -0.61
SMARCA2-223	ENST00000634435	KDM4F	A0A1W2PPD8	638 aa		11.22	□□□□□ -0.61
SMARCA2-223	ENST00000634435	GPR37	O15354	613 aa		11.22	□□□□□ -0.61
SMARCA2-223	ENST00000634435	CUL7	Q14999	1698 aa		11.22	□□□□□ -0.61
SMARCA2-223	ENST00000634435	PDE4D	Q08499	809 aa		11.21	□□□□□ -0.61
SMARCA2-223	ENST00000634435	KDM4C	Q9H3R0	1056 aa		11.21	□□□□□ -0.61
SMARCA2-223	ENST00000634435	MAP3K9	P80192	1104 aa		11.2	□□□□□ -0.62
SMARCA2-223	ENST00000634435	ABCC2	Q92887	1545 aa		11.19	□□□□□ -0.62
SMARCA2-223	ENST00000634435	CARMIL2	Q6F5E8	1435 aa		11.19	□□□□□ -0.62
SMARCA2-223	ENST00000634435	TNIK	Q9UKE5	1360 aa		11.19	□□□□□ -0.62
SMARCA2-223	ENST00000634435	ASXL2	Q76L83	1435 aa		11.18	□□□□□ -0.62
SMARCA2-223	ENST00000634435	CARMIL1	Q5VZK9	1371 aa		11.18	□□□□□ -0.62
SMARCA2-223	ENST00000634435	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.18	□□□□□ -0.62
SMARCA2-223	ENST00000634435	TSPOAP1	O95153	1857 aa		11.18	□□□□□ -0.62
SMARCA2-223	ENST00000634435	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.17	□□□□□ -0.62
SMARCA2-223	ENST00000634435	PLB1	Q6P1J6	1458 aa		11.17	□□□□□ -0.62
SMARCA2-223	ENST00000634435	GRXCR2	A6NFK2	248 aa		11.15	□□□□□ -0.62
SMARCA2-223	ENST00000634435	PTGER2	P43116	358 aa		11.15	□□□□□ -0.62
SMARCA2-223	ENST00000634435	MAP2K5	Q13163	448 aa		11.15	□□□□□ -0.62
SMARCA2-223	ENST00000634435	MMRN1	Q13201	1228 aa		11.15	□□□□□ -0.62
SMARCA2-223	ENST00000634435	IQGAP2	Q13576	1575 aa		11.15	□□□□□ -0.62
SMARCA2-223	ENST00000634435	IL27	Q8NEV9	243 aa		11.14	□□□□□ -0.63
SMARCA2-223	ENST00000634435	OXER1	Q8TDS5	423 aa		11.14	□□□□□ -0.63
SMARCA2-223	ENST00000634435	UACA	Q9BZF9	1416 aa		11.14	□□□□□ -0.63
SMARCA2-223	ENST00000634435	UHRF1BP1L	A0JNW5	1464 aa		11.13	□□□□□ -0.63
SMARCA2-223	ENST00000634435	ADGRL1	O94910	1474 aa		11.13	□□□□□ -0.63
SMARCA2-223	ENST00000634435	GLI2	P10070	1586 aa		11.13	□□□□□ -0.63
SMARCA2-223	ENST00000634435	NUTM2F	A1L443	756 aa		11.13	□□□□□ -0.63
SMARCA2-223	ENST00000634435	SNPH	O15079	494 aa		11.13	□□□□□ -0.63
SMARCA2-223	ENST00000634435	SPNS2	Q8IVW8	549 aa		11.13	□□□□□ -0.63
SMARCA2-223	ENST00000634435	OSBP	P22059	807 aa		11.12	□□□□□ -0.63
SMARCA2-223	ENST00000634435	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.12	□□□□□ -0.63
SMARCA2-223	ENST00000634435	GNPAT	O15228	680 aa		11.11	□□□□□ -0.63

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