RNA–Protein interactions for RNA: ENST00000633295.1

LINC01002-225, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 3

Gene LINC01002, Length 492 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-225	ENST00000633295	PLSCR2	Q9NRY7	297 aa		13.85	□□□□□ -0.19
LINC01002-225	ENST00000633295	SSTR3	P32745	418 aa	Predicted RBP	13.84	□□□□□ -0.19
LINC01002-225	ENST00000633295	MDM2	Q00987	491 aa	Predicted RBP	13.83	□□□□□ -0.2
LINC01002-225	ENST00000633295	CHRDL2	Q6WN34	429 aa		13.83	□□□□□ -0.2
LINC01002-225	ENST00000633295	BANK1	Q8NDB2	785 aa		13.83	□□□□□ -0.2
LINC01002-225	ENST00000633295		G3V3G9	751 aa		13.82	□□□□□ -0.2
LINC01002-225	ENST00000633295	EVI5	O60447	810 aa		13.82	□□□□□ -0.2
LINC01002-225	ENST00000633295	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
LINC01002-225	ENST00000633295	COG6	Q9Y2V7	657 aa		13.82	□□□□□ -0.2
LINC01002-225	ENST00000633295	BEGAIN	Q9BUH8	593 aa		13.81	□□□□□ -0.2
LINC01002-225	ENST00000633295	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.79	□□□□□ -0.2
LINC01002-225	ENST00000633295	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.78	□□□□□ -0.2
LINC01002-225	ENST00000633295	EN1	Q05925	392 aa	Predicted RBP	13.77	□□□□□ -0.21
LINC01002-225	ENST00000633295	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.77	□□□□□ -0.21
LINC01002-225	ENST00000633295	AEBP1	Q8IUX7	1158 aa		13.76	□□□□□ -0.21
LINC01002-225	ENST00000633295	RETREG2	Q8NC44	543 aa		13.76	□□□□□ -0.21
LINC01002-225	ENST00000633295	PPP1R15A	O75807	674 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC01002-225	ENST00000633295	IRX5	P78411	483 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC01002-225	ENST00000633295	PHOX2B	Q99453	314 aa		13.75	□□□□□ -0.21
LINC01002-225	ENST00000633295	EPAS1	Q99814	870 aa		13.75	□□□□□ -0.21
LINC01002-225	ENST00000633295	OCEL1	Q9H607	264 aa		13.75	□□□□□ -0.21
LINC01002-225	ENST00000633295	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC01002-225	ENST00000633295	MYSM1	Q5VVJ2	828 aa		13.74	□□□□□ -0.21
LINC01002-225	ENST00000633295	CDHR5	Q9HBB8	845 aa		13.74	□□□□□ -0.21
LINC01002-225	ENST00000633295	POLR3E	Q9NVU0	708 aa		13.74	□□□□□ -0.21
LINC01002-225	ENST00000633295	CLK2	P49760	499 aa	Known RBP	13.73	□□□□□ -0.21
LINC01002-225	ENST00000633295	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.73	□□□□□ -0.21
LINC01002-225	ENST00000633295	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.73	□□□□□ -0.21
LINC01002-225	ENST00000633295	PHF14	O94880	888 aa		13.72	□□□□□ -0.21
LINC01002-225	ENST00000633295	PDE4C	Q08493	712 aa		13.72	□□□□□ -0.21
LINC01002-225	ENST00000633295	DIXDC1	Q155Q3	683 aa		13.72	□□□□□ -0.21
LINC01002-225	ENST00000633295	IER5L	Q5T953	404 aa		13.72	□□□□□ -0.21
LINC01002-225	ENST00000633295	TMEM259	Q4ZIN3	620 aa		13.71	□□□□□ -0.21
LINC01002-225	ENST00000633295	TMCO4	Q5TGY1	634 aa		13.71	□□□□□ -0.21
LINC01002-225	ENST00000633295	C19orf67	A6NJJ6	358 aa		13.7	□□□□□ -0.22
LINC01002-225	ENST00000633295	RFC5	P40937	340 aa		13.7	□□□□□ -0.22
LINC01002-225	ENST00000633295	PTCD2	Q8WV60	388 aa	Known RBP	13.7	□□□□□ -0.22
LINC01002-225	ENST00000633295	SOCS7	O14512	581 aa		13.69	□□□□□ -0.22
LINC01002-225	ENST00000633295	OAT	P04181	439 aa		13.69	□□□□□ -0.22
LINC01002-225	ENST00000633295	WWC1	Q8IX03	1113 aa		13.69	□□□□□ -0.22
LINC01002-225	ENST00000633295	RGS22	Q8NE09	1264 aa		13.69	□□□□□ -0.22
LINC01002-225	ENST00000633295	MAP3K7	O43318	606 aa		13.68	□□□□□ -0.22
LINC01002-225	ENST00000633295	METTL3	Q86U44	580 aa	Known RBP	13.68	□□□□□ -0.22
LINC01002-225	ENST00000633295	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.68	□□□□□ -0.22
LINC01002-225	ENST00000633295	TMEM92	Q6UXU6	159 aa		13.67	□□□□□ -0.22
LINC01002-225	ENST00000633295	SNRK	Q9NRH2	765 aa		13.67	□□□□□ -0.22
LINC01002-225	ENST00000633295	PATL2	C9JE40	543 aa	Known RBP	13.66	□□□□□ -0.22
LINC01002-225	ENST00000633295	PPP2R2D	Q66LE6	453 aa		13.66	□□□□□ -0.22
LINC01002-225	ENST00000633295	IRF5	Q13568	498 aa		13.64	□□□□□ -0.23
LINC01002-225	ENST00000633295	TBC1D2	Q9BYX2	928 aa		13.63	□□□□□ -0.23
LINC01002-225	ENST00000633295	SLC34A2	O95436	690 aa		13.61	□□□□□ -0.23
LINC01002-225	ENST00000633295	MFAP1	P55081	439 aa	Known RBP	13.61	□□□□□ -0.23
LINC01002-225	ENST00000633295	GZF1	Q9H116	711 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC01002-225	ENST00000633295	ACIN1	Q9UKV3	1341 aa	Known RBP	13.61	□□□□□ -0.23
LINC01002-225	ENST00000633295	CLCN6	P51797	869 aa		13.6	□□□□□ -0.23
LINC01002-225	ENST00000633295	TUSC1	Q2TAM9	212 aa		13.6	□□□□□ -0.23
LINC01002-225	ENST00000633295	SLAIN1	Q8ND83	568 aa		13.6	□□□□□ -0.23
LINC01002-225	ENST00000633295	CERK	Q8TCT0	537 aa		13.6	□□□□□ -0.23
LINC01002-225	ENST00000633295	PXYLP1	Q8TE99	480 aa		13.6	□□□□□ -0.23
LINC01002-225	ENST00000633295	PRM3	Q9NNZ6	103 aa		13.6	□□□□□ -0.23
LINC01002-225	ENST00000633295	GALR2	O43603	387 aa	Predicted RBP	13.59	□□□□□ -0.23
LINC01002-225	ENST00000633295	PLCG2	P16885	1265 aa		13.59	□□□□□ -0.23
LINC01002-225	ENST00000633295	ATN1	P54259	1190 aa	Predicted RBP	13.59	□□□□□ -0.23
LINC01002-225	ENST00000633295	TYW1B	Q6NUM6	668 aa		13.59	□□□□□ -0.23
LINC01002-225	ENST00000633295	MTMR14	Q8NCE2	650 aa		13.59	□□□□□ -0.23
LINC01002-225	ENST00000633295	FBXW7	Q969H0	707 aa		13.58	□□□□□ -0.24
LINC01002-225	ENST00000633295	CALR3	Q96L12	384 aa	Known RBP	13.58	□□□□□ -0.24
LINC01002-225	ENST00000633295	TSR1	Q2NL82	804 aa	Known RBP	13.57	□□□□□ -0.24
LINC01002-225	ENST00000633295	GDPD2	Q9HCC8	539 aa		13.57	□□□□□ -0.24
LINC01002-225	ENST00000633295	RBM27	Q9P2N5	1060 aa	Known RBP	13.57	□□□□□ -0.24
LINC01002-225	ENST00000633295	MTMR7	Q9Y216	660 aa		13.57	□□□□□ -0.24
LINC01002-225	ENST00000633295	ADGRG1	Q9Y653	693 aa		13.57	□□□□□ -0.24
LINC01002-225	ENST00000633295	RBM33	Q96EV2	1170 aa	Known RBP	13.56	□□□□□ -0.24
LINC01002-225	ENST00000633295	PCDHGA10	Q9Y5H3	936 aa		13.56	□□□□□ -0.24
LINC01002-225	ENST00000633295	LIMD1	Q9UGP4	676 aa		13.54	□□□□□ -0.24
LINC01002-225	ENST00000633295	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.53	□□□□□ -0.24
LINC01002-225	ENST00000633295	GLMN	Q92990	594 aa		13.53	□□□□□ -0.24
LINC01002-225	ENST00000633295	ATMIN	O43313	823 aa	Predicted RBP	13.52	□□□□□ -0.25
LINC01002-225	ENST00000633295	KCNA1	Q09470	495 aa		13.52	□□□□□ -0.25
LINC01002-225	ENST00000633295	ASTL	Q6HA08	431 aa	Predicted RBP	13.52	□□□□□ -0.25
LINC01002-225	ENST00000633295	PADI6	Q6TGC4	694 aa		13.52	□□□□□ -0.25
LINC01002-225	ENST00000633295	TTC13	Q8NBP0	860 aa		13.52	□□□□□ -0.25
LINC01002-225	ENST00000633295	NLRP7	Q8WX94	980 aa		13.52	□□□□□ -0.25
LINC01002-225	ENST00000633295	FAM161A	Q3B820	660 aa		13.51	□□□□□ -0.25
LINC01002-225	ENST00000633295	RIC3	Q7Z5B4	369 aa		13.51	□□□□□ -0.25
LINC01002-225	ENST00000633295	UST	Q9Y2C2	406 aa		13.51	□□□□□ -0.25
LINC01002-225	ENST00000633295	PBXIP1	Q96AQ6	731 aa		13.5	□□□□□ -0.25
LINC01002-225	ENST00000633295	JPH4	Q96JJ6	628 aa		13.5	□□□□□ -0.25
LINC01002-225	ENST00000633295	SPTLC1	O15269	473 aa		13.49	□□□□□ -0.25
LINC01002-225	ENST00000633295	ABL2	P42684	1182 aa		13.49	□□□□□ -0.25
LINC01002-225	ENST00000633295	BRD1	O95696	1058 aa		13.48	□□□□□ -0.25
LINC01002-225	ENST00000633295	GJA5	P36382	358 aa		13.47	□□□□□ -0.25
LINC01002-225	ENST00000633295	SPIRE2	Q8WWL2	714 aa		13.47	□□□□□ -0.25
LINC01002-225	ENST00000633295	RBM46	Q8TBY0	533 aa	Known RBP	13.46	□□□□□ -0.25
LINC01002-225	ENST00000633295	POM121C	A8CG34	1229 aa		13.45	□□□□□ -0.26
LINC01002-225	ENST00000633295	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.44	□□□□□ -0.26
LINC01002-225	ENST00000633295	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.44	□□□□□ -0.26
LINC01002-225	ENST00000633295	TBC1D2B	Q9UPU7	963 aa		13.44	□□□□□ -0.26
LINC01002-225	ENST00000633295	CD46	P15529	392 aa		13.41	□□□□□ -0.26
LINC01002-225	ENST00000633295	C6orf132	Q5T0Z8	1188 aa		13.41	□□□□□ -0.26

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