RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 HECW2Q9P2P5 1572 aa20.34■□□□□ 0.85
LIMS4-204ENST00000632897 INO80Q9ULG1 1556 aaPredicted RBP20.34■□□□□ 0.85
LIMS4-204ENST00000632897 IQGAP3Q86VI3 1631 aa20.33■□□□□ 0.84
LIMS4-204ENST00000632897 SCAPERQ9BY12 1400 aa20.31■□□□□ 0.84
LIMS4-204ENST00000632897 ATP7AQ04656 1500 aa20.31■□□□□ 0.84
LIMS4-204ENST00000632897 ADAMTSL3P82987 1691 aa20.31■□□□□ 0.84
LIMS4-204ENST00000632897 ZMYM4Q5VZL5 1548 aa20.29■□□□□ 0.84
LIMS4-204ENST00000632897 BCORL1Q5H9F3 1711 aa20.29■□□□□ 0.84
LIMS4-204ENST00000632897 ARID4BQ4LE39 1312 aaPredicted RBP20.28■□□□□ 0.84
LIMS4-204ENST00000632897 L3MBTL2Q969R5 705 aa20.28■□□□□ 0.84
LIMS4-204ENST00000632897 AFAP1Q8N556 730 aa20.27■□□□□ 0.84
LIMS4-204ENST00000632897 ZNF518AQ6AHZ1 1483 aa20.26■□□□□ 0.83
LIMS4-204ENST00000632897 POGZQ7Z3K3 1410 aa20.26■□□□□ 0.83
LIMS4-204ENST00000632897 EIF2AK4Q9P2K8 1649 aaKnown RBP20.24■□□□□ 0.83
LIMS4-204ENST00000632897 PTPRMP28827 1452 aa20.23■□□□□ 0.83
LIMS4-204ENST00000632897 DEPDC5O75140 1603 aa20.22■□□□□ 0.83
LIMS4-204ENST00000632897 KDM5CP41229 1560 aa20.22■□□□□ 0.83
LIMS4-204ENST00000632897 MADDQ8WXG6 1647 aa20.2■□□□□ 0.82
LIMS4-204ENST00000632897 ATP10AO60312 1499 aa20.19■□□□□ 0.82
LIMS4-204ENST00000632897 KIDINS220Q9ULH0 1771 aa20.19■□□□□ 0.82
LIMS4-204ENST00000632897 DHX29Q7Z478 1369 aaKnown RBP20.18■□□□□ 0.82
LIMS4-204ENST00000632897 MLH3Q9UHC1 1453 aa20.17■□□□□ 0.82
LIMS4-204ENST00000632897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.17■□□□□ 0.82
LIMS4-204ENST00000632897 MIER1Q8N108 512 aa20.16■□□□□ 0.82
LIMS4-204ENST00000632897 RIMS1Q86UR5 1692 aaKnown RBP20.15■□□□□ 0.82
LIMS4-204ENST00000632897 VWDEQ8N2E2 1590 aa20.15■□□□□ 0.82
LIMS4-204ENST00000632897 CCDC144AA2RUR9 1427 aa20.14■□□□□ 0.81
LIMS4-204ENST00000632897 UHRF1BP1Q6BDS2 1440 aa20.14■□□□□ 0.81
LIMS4-204ENST00000632897 PRDM15P57071 1507 aaPredicted RBP20.13■□□□□ 0.81
LIMS4-204ENST00000632897 PLA2R1Q13018 1463 aa20.13■□□□□ 0.81
LIMS4-204ENST00000632897 YEATS2Q9ULM3 1422 aa20.12■□□□□ 0.81
LIMS4-204ENST00000632897 NBPF8Q3BBV2 869 aa20.12■□□□□ 0.81
LIMS4-204ENST00000632897 TET3O43151 1660 aa20.12■□□□□ 0.81
LIMS4-204ENST00000632897 KANK1Q14678 1352 aa20.12■□□□□ 0.81
LIMS4-204ENST00000632897 EIF4G2P78344 907 aaKnown RBP eCLIP20.11■□□□□ 0.81
LIMS4-204ENST00000632897 MYT1LQ9UL68 1186 aa20.11■□□□□ 0.81
LIMS4-204ENST00000632897 A2MP01023 1474 aa20.11■□□□□ 0.81
LIMS4-204ENST00000632897 FER1L4A9Z1Z3 1794 aa20.11■□□□□ 0.81
LIMS4-204ENST00000632897 MROH1Q8NDA8 1641 aa20.09■□□□□ 0.81
LIMS4-204ENST00000632897 RNF17Q9BXT8 1623 aaKnown RBP20.09■□□□□ 0.81
LIMS4-204ENST00000632897 E9PCH4 1651 aa20.08■□□□□ 0.81
LIMS4-204ENST00000632897 HSPA5P11021 654 aaKnown RBP20.08■□□□□ 0.81
LIMS4-204ENST00000632897 RALGAPBQ86X10 1494 aa20.06■□□□□ 0.8
LIMS4-204ENST00000632897 TRPM2O94759 1503 aa20.05■□□□□ 0.8
LIMS4-204ENST00000632897 KIF3BO15066 747 aa20.05■□□□□ 0.8
LIMS4-204ENST00000632897 LMTK2Q8IWU2 1503 aa20.05■□□□□ 0.8
LIMS4-204ENST00000632897 PTPRTO14522 1441 aa20.05■□□□□ 0.8
LIMS4-204ENST00000632897 HIRIP3Q9BW71 556 aaPredicted RBP20.05■□□□□ 0.8
LIMS4-204ENST00000632897 ABCA6Q8N139 1617 aa20.04■□□□□ 0.8
LIMS4-204ENST00000632897 SPHKAPQ2M3C7 1700 aa20.04■□□□□ 0.8
LIMS4-204ENST00000632897 SIGLEC1Q9BZZ2 1709 aa20.04■□□□□ 0.8
LIMS4-204ENST00000632897 SPATA31E1Q6ZUB1 1445 aa20.03■□□□□ 0.8
LIMS4-204ENST00000632897 REREQ9P2R6 1566 aa20.03■□□□□ 0.8
LIMS4-204ENST00000632897 DDX10Q13206 875 aaKnown RBP20.02■□□□□ 0.8
LIMS4-204ENST00000632897 LMTK3Q96Q04 1460 aa20.02■□□□□ 0.8
LIMS4-204ENST00000632897 MLECQ14165 292 aa20.01■□□□□ 0.79
LIMS4-204ENST00000632897 EFCAB6Q5THR3 1501 aa20■□□□□ 0.79
LIMS4-204ENST00000632897 ILDR1Q86SU0 546 aaPredicted RBP20■□□□□ 0.79
LIMS4-204ENST00000632897 DIP2CQ9Y2E4 1556 aa20■□□□□ 0.79
LIMS4-204ENST00000632897 NEURL4Q96JN8 1562 aa19.98■□□□□ 0.79
LIMS4-204ENST00000632897 DCAF11Q8TEB1 546 aa19.98■□□□□ 0.79
LIMS4-204ENST00000632897 CEP152O94986 1710 aa19.97■□□□□ 0.79
LIMS4-204ENST00000632897 PRAG1Q86YV5 1406 aa19.97■□□□□ 0.79
LIMS4-204ENST00000632897 POLR1AO95602 1720 aaPredicted RBP19.97■□□□□ 0.79
LIMS4-204ENST00000632897 CENPBP07199 599 aaPredicted RBP19.95■□□□□ 0.78
LIMS4-204ENST00000632897 ZNF326Q5BKZ1 582 aaKnown RBP19.95■□□□□ 0.78
LIMS4-204ENST00000632897 USP47Q96K76 1375 aa19.95■□□□□ 0.78
LIMS4-204ENST00000632897 PREX1Q8TCU6 1659 aa19.94■□□□□ 0.78
LIMS4-204ENST00000632897 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
LIMS4-204ENST00000632897 CLTCL1P53675 1640 aa19.94■□□□□ 0.78
LIMS4-204ENST00000632897 TRPM1Q7Z4N2 1603 aa19.94■□□□□ 0.78
LIMS4-204ENST00000632897 AGLP35573 1532 aa19.94■□□□□ 0.78
LIMS4-204ENST00000632897 WASHC2AQ641Q2 1341 aa19.94■□□□□ 0.78
LIMS4-204ENST00000632897 LAMC1P11047 1609 aa19.93■□□□□ 0.78
LIMS4-204ENST00000632897 STAC3Q96MF2 364 aa19.92■□□□□ 0.78
LIMS4-204ENST00000632897 CCDC7Q96M83 1385 aa19.92■□□□□ 0.78
LIMS4-204ENST00000632897 ESF1Q9H501 851 aaKnown RBP19.92■□□□□ 0.78
LIMS4-204ENST00000632897 KDM2AQ9Y2K7 1162 aa19.92■□□□□ 0.78
LIMS4-204ENST00000632897 SETD1BQ9UPS6 1966 aaKnown RBP19.9■□□□□ 0.78
LIMS4-204ENST00000632897 RGL3Q3MIN7 710 aa19.9■□□□□ 0.78
LIMS4-204ENST00000632897 ABCC3O15438 1527 aa19.9■□□□□ 0.78
LIMS4-204ENST00000632897 GPRASP1Q5JY77 1395 aa19.89■□□□□ 0.78
LIMS4-204ENST00000632897 CARD11Q9BXL7 1154 aa19.89■□□□□ 0.77
LIMS4-204ENST00000632897 ZC3H13Q5T200 1668 aaKnown RBP19.88■□□□□ 0.77
LIMS4-204ENST00000632897 ROCK2O75116 1388 aaKnown RBP19.88■□□□□ 0.77
LIMS4-204ENST00000632897 ANP32CO43423 234 aa19.87■□□□□ 0.77
LIMS4-204ENST00000632897 CNTLNQ9NXG0 1405 aa19.87■□□□□ 0.77
LIMS4-204ENST00000632897 CAMSAP1Q5T5Y3 1602 aa19.85■□□□□ 0.77
LIMS4-204ENST00000632897 FBXO41Q8TF61 875 aa19.85■□□□□ 0.77
LIMS4-204ENST00000632897 NPATQ14207 1427 aa19.84■□□□□ 0.77
LIMS4-204ENST00000632897 KIF1BO60333 1816 aa19.83■□□□□ 0.77
LIMS4-204ENST00000632897 KIF7Q2M1P5 1343 aa19.83■□□□□ 0.76
LIMS4-204ENST00000632897 C11orf95C9JLR9 678 aaPredicted RBP19.83■□□□□ 0.76
LIMS4-204ENST00000632897 CCER2I3L3R5 266 aa19.83■□□□□ 0.76
LIMS4-204ENST00000632897 HSPA2P54652 639 aa19.83■□□□□ 0.76
LIMS4-204ENST00000632897 GGT6Q6P531 493 aa19.83■□□□□ 0.76
LIMS4-204ENST00000632897 C3P01024 1663 aa19.83■□□□□ 0.76
LIMS4-204ENST00000632897 WASHC2CQ9Y4E1 1318 aa19.82■□□□□ 0.76
LIMS4-204ENST00000632897 ARHGAP31Q2M1Z3 1444 aa19.81■□□□□ 0.76
LIMS4-204ENST00000632897 MROH2AA6NES4 1674 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 276.2 ms