RNA–Protein interactions for RNA: ENST00000629009.2

CCDC163-206, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,694 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-206ENST00000629009 PREX1Q8TCU6 1659 aa12.99□□□□□ -0.33
CCDC163-206ENST00000629009 SPATA31D1Q6ZQQ2 1576 aa12.99□□□□□ -0.33
CCDC163-206ENST00000629009 STRCQ7RTU9 1775 aa12.99□□□□□ -0.33
CCDC163-206ENST00000629009 PLEKHH2Q8IVE3 1493 aa12.98□□□□□ -0.33
CCDC163-206ENST00000629009 POGZQ7Z3K3 1410 aa12.97□□□□□ -0.33
CCDC163-206ENST00000629009 DMRT2Q9Y5R5 561 aa12.97□□□□□ -0.33
CCDC163-206ENST00000629009 ABCC1P33527 1531 aa12.97□□□□□ -0.33
CCDC163-206ENST00000629009 KIAA1107Q9UPP5 1409 aa12.97□□□□□ -0.33
CCDC163-206ENST00000629009 ZMYM4Q5VZL5 1548 aa12.96□□□□□ -0.33
CCDC163-206ENST00000629009 SOCS7O14512 581 aa12.96□□□□□ -0.33
CCDC163-206ENST00000629009 HSPA2P54652 639 aa12.96□□□□□ -0.33
CCDC163-206ENST00000629009 MYT1Q01538 1121 aa12.96□□□□□ -0.33
CCDC163-206ENST00000629009 CERKQ8TCT0 537 aa12.96□□□□□ -0.33
CCDC163-206ENST00000629009 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
CCDC163-206ENST00000629009 ZNF518AQ6AHZ1 1483 aa12.96□□□□□ -0.33
CCDC163-206ENST00000629009 SAMD9LQ8IVG5 1584 aa12.96□□□□□ -0.33
CCDC163-206ENST00000629009 MAGI2Q86UL8 1455 aa12.96□□□□□ -0.34
CCDC163-206ENST00000629009 PPARGC1BQ86YN6 1023 aaKnown RBP12.96□□□□□ -0.34
CCDC163-206ENST00000629009 MIA2Q96PC5 1412 aa12.95□□□□□ -0.34
CCDC163-206ENST00000629009 MYOM3Q5VTT5 1437 aa12.95□□□□□ -0.34
CCDC163-206ENST00000629009 DISP3Q9P2K9 1392 aa12.95□□□□□ -0.34
CCDC163-206ENST00000629009 ARHGEF12Q9NZN5 1544 aa12.94□□□□□ -0.34
CCDC163-206ENST00000629009 KDM5CP41229 1560 aa12.93□□□□□ -0.34
CCDC163-206ENST00000629009 NEUROD2Q15784 382 aa12.93□□□□□ -0.34
CCDC163-206ENST00000629009 SYCP2Q9BX26 1530 aa12.92□□□□□ -0.34
CCDC163-206ENST00000629009 RSPH4AQ5TD94 716 aa12.92□□□□□ -0.34
CCDC163-206ENST00000629009 AFAP1Q8N556 730 aa12.92□□□□□ -0.34
CCDC163-206ENST00000629009 ARID4BQ4LE39 1312 aaPredicted RBP12.91□□□□□ -0.34
CCDC163-206ENST00000629009 TRAPPC8Q9Y2L5 1435 aa12.91□□□□□ -0.34
CCDC163-206ENST00000629009 HNRNPMP52272 730 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCDC163-206ENST00000629009 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
CCDC163-206ENST00000629009 LMOD2Q6P5Q4 547 aa12.91□□□□□ -0.34
CCDC163-206ENST00000629009 ZFYVE16Q7Z3T8 1539 aa12.91□□□□□ -0.34
CCDC163-206ENST00000629009 ZNF644Q9H582 1327 aaPredicted RBP12.91□□□□□ -0.34
CCDC163-206ENST00000629009 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
CCDC163-206ENST00000629009 MBD5Q9P267 1494 aa12.9□□□□□ -0.34
CCDC163-206ENST00000629009 MLH3Q9UHC1 1453 aa12.9□□□□□ -0.34
CCDC163-206ENST00000629009 HS6ST3Q8IZP7 471 aa12.9□□□□□ -0.34
CCDC163-206ENST00000629009 CCDC9Q9Y3X0 531 aaKnown RBP12.9□□□□□ -0.34
CCDC163-206ENST00000629009 ZMYND15Q9H091 742 aa12.88□□□□□ -0.35
CCDC163-206ENST00000629009 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
CCDC163-206ENST00000629009 YEATS2Q9ULM3 1422 aa12.87□□□□□ -0.35
CCDC163-206ENST00000629009 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
CCDC163-206ENST00000629009 ARHGEF5Q12774 1597 aa12.87□□□□□ -0.35
CCDC163-206ENST00000629009 MSH5O43196 834 aa12.86□□□□□ -0.35
CCDC163-206ENST00000629009 CCDC141Q6ZP82 1450 aa12.86□□□□□ -0.35
CCDC163-206ENST00000629009 SPAG9O60271 1321 aaKnown RBP12.86□□□□□ -0.35
CCDC163-206ENST00000629009 ATP10AO60312 1499 aa12.86□□□□□ -0.35
CCDC163-206ENST00000629009 TCOF1Q13428 1488 aaKnown RBP12.86□□□□□ -0.35
CCDC163-206ENST00000629009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC163-206ENST00000629009 PTPN23Q9H3S7 1636 aa12.85□□□□□ -0.35
CCDC163-206ENST00000629009 RTEL1-TNFRSF6BF6WH68 1400 aa12.85□□□□□ -0.35
CCDC163-206ENST00000629009 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
CCDC163-206ENST00000629009 ARID3AQ99856 593 aa12.84□□□□□ -0.35
CCDC163-206ENST00000629009 SETD1BQ9UPS6 1966 aaKnown RBP12.84□□□□□ -0.35
CCDC163-206ENST00000629009 TSPY4P0CV99 314 aa12.83□□□□□ -0.35
CCDC163-206ENST00000629009 TSPY10P0CW01 314 aa12.83□□□□□ -0.35
CCDC163-206ENST00000629009 KIDINS220Q9ULH0 1771 aa12.83□□□□□ -0.36
CCDC163-206ENST00000629009 C9orf84Q5VXU9 1444 aa12.83□□□□□ -0.36
CCDC163-206ENST00000629009 ATP7AQ04656 1500 aa12.83□□□□□ -0.36
CCDC163-206ENST00000629009 REREQ9P2R6 1566 aa12.83□□□□□ -0.36
CCDC163-206ENST00000629009 INO80Q9ULG1 1556 aaPredicted RBP12.83□□□□□ -0.36
CCDC163-206ENST00000629009 ZBTB7CA1YPR0 619 aa12.83□□□□□ -0.36
CCDC163-206ENST00000629009 DIP2CQ9Y2E4 1556 aa12.82□□□□□ -0.36
CCDC163-206ENST00000629009 C3P01024 1663 aa12.82□□□□□ -0.36
CCDC163-206ENST00000629009 LTBP4Q8N2S1 1624 aa12.82□□□□□ -0.36
CCDC163-206ENST00000629009 ABCA6Q8N139 1617 aa12.81□□□□□ -0.36
CCDC163-206ENST00000629009 MAST1Q9Y2H9 1570 aa12.8□□□□□ -0.36
CCDC163-206ENST00000629009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC163-206ENST00000629009 PCGF6Q9BYE7 350 aa12.8□□□□□ -0.36
CCDC163-206ENST00000629009 SHANK2Q9UPX8 1470 aa12.79□□□□□ -0.36
CCDC163-206ENST00000629009 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
CCDC163-206ENST00000629009 DNMT1P26358 1616 aaKnown RBP12.79□□□□□ -0.36
CCDC163-206ENST00000629009 AGLP35573 1532 aa12.79□□□□□ -0.36
CCDC163-206ENST00000629009 ABCC5O15440 1437 aa12.78□□□□□ -0.36
CCDC163-206ENST00000629009 DAPK1P53355 1430 aa12.78□□□□□ -0.36
CCDC163-206ENST00000629009 FAM50AQ14320 339 aaKnown RBP12.77□□□□□ -0.36
CCDC163-206ENST00000629009 A2MP01023 1474 aa12.77□□□□□ -0.36
CCDC163-206ENST00000629009 IQSEC2Q5JU85 1478 aa12.76□□□□□ -0.37
CCDC163-206ENST00000629009 ADGBQ8N7X0 1667 aa12.76□□□□□ -0.37
CCDC163-206ENST00000629009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC163-206ENST00000629009 RRBP1Q9P2E9 1410 aaKnown RBP12.76□□□□□ -0.37
CCDC163-206ENST00000629009 DHX29Q7Z478 1369 aaKnown RBP12.75□□□□□ -0.37
CCDC163-206ENST00000629009 CROCC2H7BZ55 1655 aa12.75□□□□□ -0.37
CCDC163-206ENST00000629009 MLECQ14165 292 aa12.75□□□□□ -0.37
CCDC163-206ENST00000629009 UHRF1BP1Q6BDS2 1440 aa12.75□□□□□ -0.37
CCDC163-206ENST00000629009 PLXNC1O60486 1568 aa12.75□□□□□ -0.37
CCDC163-206ENST00000629009 PTPRTO14522 1441 aa12.74□□□□□ -0.37
CCDC163-206ENST00000629009 GTPBP6O43824 516 aaPredicted RBP12.74□□□□□ -0.37
CCDC163-206ENST00000629009 NKX1-1Q15270 411 aaPredicted RBP12.73□□□□□ -0.37
CCDC163-206ENST00000629009 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
CCDC163-206ENST00000629009 ANKRD30AQ9BXX3 1397 aa12.72□□□□□ -0.37
CCDC163-206ENST00000629009 ADGRL2O95490 1459 aa12.71□□□□□ -0.37
CCDC163-206ENST00000629009 PDIA4P13667 645 aaKnown RBP12.71□□□□□ -0.37
CCDC163-206ENST00000629009 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.37
CCDC163-206ENST00000629009 DUOX2Q9NRD8 1548 aa12.71□□□□□ -0.37
CCDC163-206ENST00000629009 NCOA1Q15788 1441 aa12.7□□□□□ -0.38
CCDC163-206ENST00000629009 KIF15Q9NS87 1388 aa12.7□□□□□ -0.38
CCDC163-206ENST00000629009 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
CCDC163-206ENST00000629009 CHIC2Q9UKJ5 165 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms