RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 SAMD9Q5K651 1589 aa10.61□□□□□ -0.71
LINC00649-220ENST00000628906 IQGAP1P46940 1657 aa10.61□□□□□ -0.71
LINC00649-220ENST00000628906 FBXO31Q5XUX0 539 aaPredicted RBP10.61□□□□□ -0.71
LINC00649-220ENST00000628906 KDM5DQ9BY66 1539 aa10.61□□□□□ -0.71
LINC00649-220ENST00000628906 TNRQ92752 1358 aa10.61□□□□□ -0.71
LINC00649-220ENST00000628906 RGS12O14924 1447 aa10.6□□□□□ -0.71
LINC00649-220ENST00000628906 SUPT5HO00267 1087 aaKnown RBP10.6□□□□□ -0.71
LINC00649-220ENST00000628906 YY1P25490 414 aa10.6□□□□□ -0.71
LINC00649-220ENST00000628906 RBM6P78332 1123 aaKnown RBP10.6□□□□□ -0.71
LINC00649-220ENST00000628906 GGT6Q6P531 493 aa10.6□□□□□ -0.71
LINC00649-220ENST00000628906 CCDC125Q86Z20 511 aa10.6□□□□□ -0.71
LINC00649-220ENST00000628906 MYO5CQ9NQX4 1742 aa10.6□□□□□ -0.71
LINC00649-220ENST00000628906 FGD6Q6ZV73 1430 aa10.59□□□□□ -0.71
LINC00649-220ENST00000628906 EP400Q96L91 3159 aa10.59□□□□□ -0.71
LINC00649-220ENST00000628906 ATAD2Q6PL18 1390 aa10.59□□□□□ -0.71
LINC00649-220ENST00000628906 LRP5O75197 1615 aa10.58□□□□□ -0.72
LINC00649-220ENST00000628906 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
LINC00649-220ENST00000628906 PRXQ9BXM0 1461 aa10.57□□□□□ -0.72
LINC00649-220ENST00000628906 QTRT2Q9H974 415 aaKnown RBP10.57□□□□□ -0.72
LINC00649-220ENST00000628906 SLAIN2Q9P270 581 aa10.57□□□□□ -0.72
LINC00649-220ENST00000628906 FAM135AQ9P2D6 1515 aa10.57□□□□□ -0.72
LINC00649-220ENST00000628906 LRRC9Q6ZRR7 1453 aa10.56□□□□□ -0.72
LINC00649-220ENST00000628906 UGGT1Q9NYU2 1555 aa10.56□□□□□ -0.72
LINC00649-220ENST00000628906 AFF2P51816 1311 aa10.56□□□□□ -0.72
LINC00649-220ENST00000628906 PHLPP1O60346 1717 aa10.55□□□□□ -0.72
LINC00649-220ENST00000628906 TMEM94Q12767 1356 aa10.55□□□□□ -0.72
LINC00649-220ENST00000628906 ITSN2Q9NZM3 1697 aa10.55□□□□□ -0.72
LINC00649-220ENST00000628906 MIA2Q96PC5 1412 aa10.55□□□□□ -0.72
LINC00649-220ENST00000628906 NLRP1Q9C000 1473 aa10.55□□□□□ -0.72
LINC00649-220ENST00000628906 COL16A1Q07092 1604 aaPredicted RBP10.53□□□□□ -0.72
LINC00649-220ENST00000628906 ZC3H13Q5T200 1668 aaKnown RBP10.53□□□□□ -0.72
LINC00649-220ENST00000628906 NGLY1Q96IV0 654 aa10.52□□□□□ -0.73
LINC00649-220ENST00000628906 CDK11AQ9UQ88 783 aaPredicted RBP10.52□□□□□ -0.73
LINC00649-220ENST00000628906 ATP7AQ04656 1500 aa10.52□□□□□ -0.73
LINC00649-220ENST00000628906 PLXNC1O60486 1568 aa10.52□□□□□ -0.73
LINC00649-220ENST00000628906 SPAG9O60271 1321 aaKnown RBP10.51□□□□□ -0.73
LINC00649-220ENST00000628906 A2MP01023 1474 aa10.5□□□□□ -0.73
LINC00649-220ENST00000628906 PZPP20742 1482 aa10.5□□□□□ -0.73
LINC00649-220ENST00000628906 SAMD9LQ8IVG5 1584 aa10.49□□□□□ -0.73
LINC00649-220ENST00000628906 SENP3-EIF4A1A0A087X0R7 540 aa10.49□□□□□ -0.73
LINC00649-220ENST00000628906 PROSER2Q86WR7 435 aaPredicted RBP10.49□□□□□ -0.73
LINC00649-220ENST00000628906 CDC42BPBQ9Y5S2 1711 aa10.49□□□□□ -0.73
LINC00649-220ENST00000628906 MAP3K1Q13233 1512 aa10.48□□□□□ -0.73
LINC00649-220ENST00000628906 MSH5O43196 834 aa10.48□□□□□ -0.73
LINC00649-220ENST00000628906 KCNA6P17658 529 aa10.48□□□□□ -0.73
LINC00649-220ENST00000628906 LTKP29376 864 aa10.48□□□□□ -0.73
LINC00649-220ENST00000628906 KIF14Q15058 1648 aa10.47□□□□□ -0.73
LINC00649-220ENST00000628906 SHPRHQ149N8 1683 aa10.47□□□□□ -0.73
LINC00649-220ENST00000628906 CEP350Q5VT06 3117 aa10.47□□□□□ -0.73
LINC00649-220ENST00000628906 HRCP23327 699 aa10.47□□□□□ -0.73
LINC00649-220ENST00000628906 NHSL1Q5SYE7 1610 aa10.45□□□□□ -0.74
LINC00649-220ENST00000628906 SCAF11Q99590 1463 aaKnown RBP10.45□□□□□ -0.74
LINC00649-220ENST00000628906 TROQ12816 1431 aaPredicted RBP10.45□□□□□ -0.74
LINC00649-220ENST00000628906 MSH6P52701 1360 aa10.45□□□□□ -0.74
LINC00649-220ENST00000628906 TXNDC2Q86VQ3 553 aa10.45□□□□□ -0.74
LINC00649-220ENST00000628906 NWD1Q149M9 1564 aa10.44□□□□□ -0.74
LINC00649-220ENST00000628906 C8orf37Q96NL8 207 aa10.43□□□□□ -0.74
LINC00649-220ENST00000628906 PRDM15P57071 1507 aaPredicted RBP10.43□□□□□ -0.74
LINC00649-220ENST00000628906 HNRNPMP52272 730 aaKnown RBP eCLIP10.42□□□□□ -0.74
LINC00649-220ENST00000628906 ABCC3O15438 1527 aa10.42□□□□□ -0.74
LINC00649-220ENST00000628906 WASHC2CQ9Y4E1 1318 aa10.41□□□□□ -0.74
LINC00649-220ENST00000628906 C1QTNF8P60827 252 aa10.41□□□□□ -0.74
LINC00649-220ENST00000628906 DEFB132Q7Z7B7 95 aa10.41□□□□□ -0.74
LINC00649-220ENST00000628906 ARHGAP23Q9P227 1491 aa10.41□□□□□ -0.74
LINC00649-220ENST00000628906 AHDC1Q5TGY3 1603 aaPredicted RBP10.4□□□□□ -0.74
LINC00649-220ENST00000628906 RANGAP1P46060 587 aaPredicted RBP10.4□□□□□ -0.74
LINC00649-220ENST00000628906 BCL9LQ86UU0 1499 aa10.4□□□□□ -0.74
LINC00649-220ENST00000628906 CLIP1P30622 1438 aa10.4□□□□□ -0.75
LINC00649-220ENST00000628906 BLMP54132 1417 aaPredicted RBP10.4□□□□□ -0.75
LINC00649-220ENST00000628906 PSDA5PKW4 1024 aaPredicted RBP10.39□□□□□ -0.75
LINC00649-220ENST00000628906 TRPC5Q9UL62 973 aaPredicted RBP10.39□□□□□ -0.75
LINC00649-220ENST00000628906 EID1Q9Y6B2 187 aa10.39□□□□□ -0.75
LINC00649-220ENST00000628906 PREX2Q70Z35 1606 aa10.39□□□□□ -0.75
LINC00649-220ENST00000628906 TIAM1Q13009 1591 aa10.39□□□□□ -0.75
LINC00649-220ENST00000628906 DIP2AQ14689 1571 aa10.39□□□□□ -0.75
LINC00649-220ENST00000628906 SLIT1O75093 1534 aa10.38□□□□□ -0.75
LINC00649-220ENST00000628906 DHX29Q7Z478 1369 aaKnown RBP10.38□□□□□ -0.75
LINC00649-220ENST00000628906 NCOA2Q15596 1464 aa10.37□□□□□ -0.75
LINC00649-220ENST00000628906 ZNF784Q8NCA9 323 aaPredicted RBP10.37□□□□□ -0.75
LINC00649-220ENST00000628906 INO80Q9ULG1 1556 aaPredicted RBP10.37□□□□□ -0.75
LINC00649-220ENST00000628906 ATP1B4Q9UN42 357 aaPredicted RBP10.37□□□□□ -0.75
LINC00649-220ENST00000628906 NKTRP30414 1462 aaKnown RBP10.36□□□□□ -0.75
LINC00649-220ENST00000628906 SETD5Q9C0A6 1442 aa10.36□□□□□ -0.75
LINC00649-220ENST00000628906 KIAA1107Q9UPP5 1409 aa10.36□□□□□ -0.75
LINC00649-220ENST00000628906 KIF3BO15066 747 aa10.36□□□□□ -0.75
LINC00649-220ENST00000628906 ZNF777Q9ULD5 760 aaPredicted RBP10.36□□□□□ -0.75
LINC00649-220ENST00000628906 SLC34A2O95436 690 aa10.35□□□□□ -0.75
LINC00649-220ENST00000628906 FNBP4Q8N3X1 1017 aaPredicted RBP10.35□□□□□ -0.75
LINC00649-220ENST00000628906 LRRC59Q96AG4 307 aaKnown RBP10.35□□□□□ -0.75
LINC00649-220ENST00000628906 USP21Q9UK80 565 aa10.35□□□□□ -0.75
LINC00649-220ENST00000628906 SYCP2Q9BX26 1530 aa10.34□□□□□ -0.75
LINC00649-220ENST00000628906 SLC26A8Q96RN1 970 aa10.34□□□□□ -0.75
LINC00649-220ENST00000628906 ADGBQ8N7X0 1667 aa10.34□□□□□ -0.75
LINC00649-220ENST00000628906 NCOA3Q9Y6Q9 1424 aa10.33□□□□□ -0.76
LINC00649-220ENST00000628906 UBR1Q8IWV7 1749 aa10.33□□□□□ -0.76
LINC00649-220ENST00000628906 BRINP3Q76B58 766 aa10.33□□□□□ -0.76
LINC00649-220ENST00000628906 CADPS2Q86UW7 1296 aa10.33□□□□□ -0.76
LINC00649-220ENST00000628906 TET3O43151 1660 aa10.32□□□□□ -0.76
LINC00649-220ENST00000628906 SF3B2Q13435 895 aaKnown RBP10.32□□□□□ -0.76
LINC00649-220ENST00000628906 ATRNO75882 1429 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms