RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 TSPY10P0CW01 314 aa12.18□□□□□ -0.46
CCDC163-204ENST00000628293 DEPDC5O75140 1603 aa12.18□□□□□ -0.46
CCDC163-204ENST00000628293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC163-204ENST00000628293 NCOA1Q15788 1441 aa12.16□□□□□ -0.46
CCDC163-204ENST00000628293 CEP152O94986 1710 aa12.16□□□□□ -0.46
CCDC163-204ENST00000628293 KIF15Q9NS87 1388 aa12.16□□□□□ -0.46
CCDC163-204ENST00000628293 FAM135AQ9P2D6 1515 aa12.16□□□□□ -0.46
CCDC163-204ENST00000628293 ADRA2BP18089 450 aa12.15□□□□□ -0.46
CCDC163-204ENST00000628293 FAM50AQ14320 339 aaKnown RBP12.15□□□□□ -0.46
CCDC163-204ENST00000628293 ZC3H13Q5T200 1668 aaKnown RBP12.15□□□□□ -0.46
CCDC163-204ENST00000628293 ERBINQ96RT1 1412 aa12.14□□□□□ -0.47
CCDC163-204ENST00000628293 PREX1Q8TCU6 1659 aa12.14□□□□□ -0.47
CCDC163-204ENST00000628293 PRDM15P57071 1507 aaPredicted RBP12.14□□□□□ -0.47
CCDC163-204ENST00000628293 CNTLNQ9NXG0 1405 aa12.13□□□□□ -0.47
CCDC163-204ENST00000628293 KDM5DQ9BY66 1539 aa12.13□□□□□ -0.47
CCDC163-204ENST00000628293 SETD1BQ9UPS6 1966 aaKnown RBP12.12□□□□□ -0.47
CCDC163-204ENST00000628293 CHIC2Q9UKJ5 165 aa12.12□□□□□ -0.47
CCDC163-204ENST00000628293 ANKRD30AQ9BXX3 1397 aa12.12□□□□□ -0.47
CCDC163-204ENST00000628293 ABCC3O15438 1527 aa12.11□□□□□ -0.47
CCDC163-204ENST00000628293 VWDEQ8N2E2 1590 aa12.11□□□□□ -0.47
CCDC163-204ENST00000628293 LMTK3Q96Q04 1460 aa12.11□□□□□ -0.47
CCDC163-204ENST00000628293 KIF3BO15066 747 aa12.11□□□□□ -0.47
CCDC163-204ENST00000628293 CAMSAP1Q5T5Y3 1602 aa12.11□□□□□ -0.47
CCDC163-204ENST00000628293 GCC2Q8IWJ2 1684 aa12.1□□□□□ -0.47
CCDC163-204ENST00000628293 CEBPAP49715 358 aaPredicted RBP12.1□□□□□ -0.47
CCDC163-204ENST00000628293 GGT6Q6P531 493 aa12.1□□□□□ -0.47
CCDC163-204ENST00000628293 RRP7BPQ9NSQ0 103 aa12.1□□□□□ -0.47
CCDC163-204ENST00000628293 UNC13BO14795 1591 aa12.09□□□□□ -0.47
CCDC163-204ENST00000628293 ROCK1Q13464 1354 aa12.09□□□□□ -0.47
CCDC163-204ENST00000628293 MYO3AQ8NEV4 1616 aa12.08□□□□□ -0.48
CCDC163-204ENST00000628293 ZMYM3Q14202 1370 aa12.08□□□□□ -0.48
CCDC163-204ENST00000628293 ZNF142P52746 1687 aaPredicted RBP12.08□□□□□ -0.48
CCDC163-204ENST00000628293 ANKRD50Q9ULJ7 1429 aa12.07□□□□□ -0.48
CCDC163-204ENST00000628293 PZPP20742 1482 aa12.07□□□□□ -0.48
CCDC163-204ENST00000628293 CFAP65Q6ZU64 1925 aaKnown RBP12.06□□□□□ -0.48
CCDC163-204ENST00000628293 NPATQ14207 1427 aa12.06□□□□□ -0.48
CCDC163-204ENST00000628293 LMTK2Q8IWU2 1503 aa12.06□□□□□ -0.48
CCDC163-204ENST00000628293 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
CCDC163-204ENST00000628293 SPATA31D1Q6ZQQ2 1576 aa12.04□□□□□ -0.48
CCDC163-204ENST00000628293 IQGAP3Q86VI3 1631 aa12.04□□□□□ -0.48
CCDC163-204ENST00000628293 EFCAB6Q5THR3 1501 aa12.03□□□□□ -0.48
CCDC163-204ENST00000628293 ITGAEP38570 1179 aa12.03□□□□□ -0.48
CCDC163-204ENST00000628293 TET3O43151 1660 aa12.03□□□□□ -0.48
CCDC163-204ENST00000628293 CEP170BQ9Y4F5 1589 aaPredicted RBP12.02□□□□□ -0.49
CCDC163-204ENST00000628293 WASHC2CQ9Y4E1 1318 aa12.02□□□□□ -0.49
CCDC163-204ENST00000628293 STRCQ7RTU9 1775 aa12.02□□□□□ -0.49
CCDC163-204ENST00000628293 NAIPQ13075 1403 aa12.02□□□□□ -0.49
CCDC163-204ENST00000628293 UHRF1BP1Q6BDS2 1440 aa12.02□□□□□ -0.49
CCDC163-204ENST00000628293 FBXO41Q8TF61 875 aa12.01□□□□□ -0.49
CCDC163-204ENST00000628293 ARHGAP31Q2M1Z3 1444 aa12.01□□□□□ -0.49
CCDC163-204ENST00000628293 ERVK-7P63135 1459 aa12.01□□□□□ -0.49
CCDC163-204ENST00000628293 E9PCH4 1651 aa12□□□□□ -0.49
CCDC163-204ENST00000628293 HFM1A2PYH4 1435 aa12□□□□□ -0.49
CCDC163-204ENST00000628293 FBXO31Q5XUX0 539 aaPredicted RBP11.99□□□□□ -0.49
CCDC163-204ENST00000628293 SYNMO15061 1565 aa11.99□□□□□ -0.49
CCDC163-204ENST00000628293 HSPA2P54652 639 aa11.98□□□□□ -0.49
CCDC163-204ENST00000628293 A2ML1A8K2U0 1454 aa11.97□□□□□ -0.49
CCDC163-204ENST00000628293 KANK1Q14678 1352 aa11.97□□□□□ -0.49
CCDC163-204ENST00000628293 TNRQ92752 1358 aa11.97□□□□□ -0.49
CCDC163-204ENST00000628293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC163-204ENST00000628293 UBR1Q8IWV7 1749 aa11.97□□□□□ -0.49
CCDC163-204ENST00000628293 PIK3C2BO00750 1634 aa11.95□□□□□ -0.5
CCDC163-204ENST00000628293 RPRD2Q5VT52 1461 aaKnown RBP11.95□□□□□ -0.5
CCDC163-204ENST00000628293 NLRP1Q9C000 1473 aa11.95□□□□□ -0.5
CCDC163-204ENST00000628293 NOS1P29475 1434 aa11.94□□□□□ -0.5
CCDC163-204ENST00000628293 POLR1AO95602 1720 aaPredicted RBP11.94□□□□□ -0.5
CCDC163-204ENST00000628293 KDM5AP29375 1690 aaKnown RBP11.94□□□□□ -0.5
CCDC163-204ENST00000628293 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
CCDC163-204ENST00000628293 SPHKAPQ2M3C7 1700 aa11.93□□□□□ -0.5
CCDC163-204ENST00000628293 PLA2R1Q13018 1463 aa11.92□□□□□ -0.5
CCDC163-204ENST00000628293 UGGT1Q9NYU2 1555 aa11.92□□□□□ -0.5
CCDC163-204ENST00000628293 NEURL4Q96JN8 1562 aa11.91□□□□□ -0.5
CCDC163-204ENST00000628293 NUP155O75694 1391 aa11.91□□□□□ -0.5
CCDC163-204ENST00000628293 ADGRB3O60242 1522 aa11.89□□□□□ -0.51
CCDC163-204ENST00000628293 TMEM131LA2VDJ0 1609 aa11.88□□□□□ -0.51
CCDC163-204ENST00000628293 ARHGAP23Q9P227 1491 aa11.87□□□□□ -0.51
CCDC163-204ENST00000628293 SETD5Q9C0A6 1442 aa11.86□□□□□ -0.51
CCDC163-204ENST00000628293 SLIT1O75093 1534 aa11.86□□□□□ -0.51
CCDC163-204ENST00000628293 CLTCL1P53675 1640 aa11.86□□□□□ -0.51
CCDC163-204ENST00000628293 TRPM2O94759 1503 aa11.86□□□□□ -0.51
CCDC163-204ENST00000628293 PTPRTO14522 1441 aa11.86□□□□□ -0.51
CCDC163-204ENST00000628293 IQGAP1P46940 1657 aa11.84□□□□□ -0.51
CCDC163-204ENST00000628293 RAB3GAP2Q9H2M9 1393 aa11.84□□□□□ -0.51
CCDC163-204ENST00000628293 MED14O60244 1454 aa11.83□□□□□ -0.52
CCDC163-204ENST00000628293 IDI1Q13907 227 aa11.83□□□□□ -0.52
CCDC163-204ENST00000628293 NCKAP5LQ9HCH0 1330 aa11.83□□□□□ -0.52
CCDC163-204ENST00000628293 KIF1BO60333 1816 aa11.82□□□□□ -0.52
CCDC163-204ENST00000628293 SOCS7O14512 581 aa11.81□□□□□ -0.52
CCDC163-204ENST00000628293 LTBP4Q8N2S1 1624 aa11.8□□□□□ -0.52
CCDC163-204ENST00000628293 PKD2Q13563 968 aa11.8□□□□□ -0.52
CCDC163-204ENST00000628293 THEMISQ8N1K5 641 aaPredicted RBP11.8□□□□□ -0.52
CCDC163-204ENST00000628293 TRIM52Q96A61 297 aa11.8□□□□□ -0.52
CCDC163-204ENST00000628293 SLC52A1Q9NWF4 448 aa11.8□□□□□ -0.52
CCDC163-204ENST00000628293 SCAF11Q99590 1463 aaKnown RBP11.8□□□□□ -0.52
CCDC163-204ENST00000628293 TMEM2Q9UHN6 1383 aa11.79□□□□□ -0.52
CCDC163-204ENST00000628293 STRCP1A6NGW2 1772 aa11.79□□□□□ -0.52
CCDC163-204ENST00000628293 ZFYVE9O95405 1425 aa11.79□□□□□ -0.52
CCDC163-204ENST00000628293 NPHP4O75161 1426 aaPredicted RBP11.77□□□□□ -0.52
CCDC163-204ENST00000628293 LTKP29376 864 aa11.77□□□□□ -0.53
CCDC163-204ENST00000628293 SLC4A1APQ9BWU0 796 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms