RNA–Protein interactions for RNA: ENST00000628267.2

UBE3A-215, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-215	ENST00000628267	DNMT1	P26358	1616 aa	Known RBP	32.14	■■■□□ 2.74
UBE3A-215	ENST00000628267	UBAP1L	F5GYI3	381 aa		32.13	■■■□□ 2.73
UBE3A-215	ENST00000628267	FAM135A	Q9P2D6	1515 aa		32.13	■■■□□ 2.73
UBE3A-215	ENST00000628267	CAMSAP2	Q08AD1	1489 aa		32.12	■■■□□ 2.73
UBE3A-215	ENST00000628267	SOCS7	O14512	581 aa		32.11	■■■□□ 2.73
UBE3A-215	ENST00000628267	KDM5D	Q9BY66	1539 aa		32.1	■■■□□ 2.73
UBE3A-215	ENST00000628267	TNR	Q92752	1358 aa		32.09	■■■□□ 2.73
UBE3A-215	ENST00000628267	WASHC2C	Q9Y4E1	1318 aa		32.08	■■■□□ 2.73
UBE3A-215	ENST00000628267	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.08	■■■□□ 2.73
UBE3A-215	ENST00000628267	PZP	P20742	1482 aa		32.08	■■■□□ 2.73
UBE3A-215	ENST00000628267	TSPY4	P0CV99	314 aa		32.05	■■■□□ 2.72
UBE3A-215	ENST00000628267	TSPY10	P0CW01	314 aa		32.05	■■■□□ 2.72
UBE3A-215	ENST00000628267	ARHGEF5	Q12774	1597 aa		32.03	■■■□□ 2.72
UBE3A-215	ENST00000628267	POLR1A	O95602	1720 aa	Predicted RBP	32.02	■■■□□ 2.72
UBE3A-215	ENST00000628267	THEMIS	Q8N1K5	641 aa	Predicted RBP	31.99	■■■□□ 2.71
UBE3A-215	ENST00000628267	MIA2	Q96PC5	1412 aa		31.98	■■■□□ 2.71
UBE3A-215	ENST00000628267	ANKLE2	Q86XL3	938 aa		31.97	■■■□□ 2.71
UBE3A-215	ENST00000628267	NEURL4	Q96JN8	1562 aa		31.97	■■■□□ 2.71
UBE3A-215	ENST00000628267	NLRP1	Q9C000	1473 aa		31.97	■■■□□ 2.71
UBE3A-215	ENST00000628267	CPS1	P31327	1500 aa		31.95	■■■□□ 2.7
UBE3A-215	ENST00000628267	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	31.94	■■■□□ 2.7	6e-7	■□□□□ 8.4
UBE3A-215	ENST00000628267	LRRC9	Q6ZRR7	1453 aa		31.92	■■■□□ 2.7
UBE3A-215	ENST00000628267	SHANK2	Q9UPX8	1470 aa		31.92	■■■□□ 2.7
UBE3A-215	ENST00000628267	UGGT1	Q9NYU2	1555 aa		31.92	■■■□□ 2.7
UBE3A-215	ENST00000628267	VPS8	Q8N3P4	1428 aa		31.9	■■■□□ 2.7
UBE3A-215	ENST00000628267	TOM1	O60784	492 aa		31.89	■■■□□ 2.7
UBE3A-215	ENST00000628267	MAST1	Q9Y2H9	1570 aa		31.88	■■■□□ 2.69
UBE3A-215	ENST00000628267	RNF17	Q9BXT8	1623 aa	Known RBP	31.87	■■■□□ 2.69
UBE3A-215	ENST00000628267	MED14	O60244	1454 aa		31.86	■■■□□ 2.69
UBE3A-215	ENST00000628267	DEPDC5	O75140	1603 aa		31.86	■■■□□ 2.69
UBE3A-215	ENST00000628267	ZC3H13	Q5T200	1668 aa	Known RBP	31.85	■■■□□ 2.69
UBE3A-215	ENST00000628267	SCAF1	Q9H7N4	1312 aa	Known RBP	31.84	■■■□□ 2.69
UBE3A-215	ENST00000628267	NPHP4	O75161	1426 aa	Predicted RBP	31.83	■■■□□ 2.69
UBE3A-215	ENST00000628267	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.82	■■■□□ 2.69
UBE3A-215	ENST00000628267	ABCC3	O15438	1527 aa		31.82	■■■□□ 2.68
UBE3A-215	ENST00000628267	PIP4K2B	P78356	416 aa		31.82	■■■□□ 2.68
UBE3A-215	ENST00000628267	VWDE	Q8N2E2	1590 aa		31.81	■■■□□ 2.68
UBE3A-215	ENST00000628267	MAP3K1	Q13233	1512 aa		31.81	■■■□□ 2.68
UBE3A-215	ENST00000628267	HSPA1L	P34931	641 aa		31.78	■■■□□ 2.68
UBE3A-215	ENST00000628267	KANK4	Q5T7N3	995 aa	Predicted RBP	31.78	■■■□□ 2.68
UBE3A-215	ENST00000628267	MYOM3	Q5VTT5	1437 aa		31.77	■■■□□ 2.68
UBE3A-215	ENST00000628267	IQGAP1	P46940	1657 aa		31.76	■■■□□ 2.67
UBE3A-215	ENST00000628267	LOC105371045	A0A1W2PR82	267 aa		31.75	■■■□□ 2.67
UBE3A-215	ENST00000628267	ERVK-7	P63135	1459 aa		31.75	■■■□□ 2.67
UBE3A-215	ENST00000628267	MROH1	Q8NDA8	1641 aa		31.72	■■■□□ 2.67
UBE3A-215	ENST00000628267	DUOX2	Q9NRD8	1548 aa		31.72	■■■□□ 2.67
UBE3A-215	ENST00000628267	CEP152	O94986	1710 aa		31.68	■■■□□ 2.66
UBE3A-215	ENST00000628267	CFAP65	Q6ZU64	1925 aa	Known RBP	31.65	■■■□□ 2.66
UBE3A-215	ENST00000628267	MED1	Q15648	1581 aa	Predicted RBP	31.64	■■■□□ 2.66
UBE3A-215	ENST00000628267	UBR1	Q8IWV7	1749 aa		31.64	■■■□□ 2.66
UBE3A-215	ENST00000628267	STRCP1	A6NGW2	1772 aa		31.62	■■■□□ 2.65
UBE3A-215	ENST00000628267	ARHGAP31	Q2M1Z3	1444 aa		31.62	■■■□□ 2.65
UBE3A-215	ENST00000628267	LRRC7	Q96NW7	1537 aa		31.62	■■■□□ 2.65
UBE3A-215	ENST00000628267	KIF15	Q9NS87	1388 aa		31.62	■■■□□ 2.65
UBE3A-215	ENST00000628267	ALK	Q9UM73	1620 aa		31.62	■■■□□ 2.65
UBE3A-215	ENST00000628267	ERBIN	Q96RT1	1412 aa		31.6	■■■□□ 2.65
UBE3A-215	ENST00000628267	SYNM	O15061	1565 aa		31.6	■■■□□ 2.65
UBE3A-215	ENST00000628267	PRDM15	P57071	1507 aa	Predicted RBP	31.59	■■■□□ 2.65
UBE3A-215	ENST00000628267	SCAF11	Q99590	1463 aa	Known RBP	31.59	■■■□□ 2.65
UBE3A-215	ENST00000628267	RRP7BP	Q9NSQ0	103 aa		31.58	■■■□□ 2.65
UBE3A-215	ENST00000628267	ABCC5	O15440	1437 aa		31.58	■■■□□ 2.65
UBE3A-215	ENST00000628267	SLIT1	O75093	1534 aa		31.56	■■■□□ 2.64
UBE3A-215	ENST00000628267	APLP2	Q06481	763 aa		31.56	■■■□□ 2.64
UBE3A-215	ENST00000628267	TXNDC2	Q86VQ3	553 aa		31.56	■■■□□ 2.64
UBE3A-215	ENST00000628267	ARHGAP23	Q9P227	1491 aa		31.56	■■■□□ 2.64
UBE3A-215	ENST00000628267	CROCC2	H7BZ55	1655 aa		31.56	■■■□□ 2.64
UBE3A-215	ENST00000628267	LTK	P29376	864 aa		31.55	■■■□□ 2.64
UBE3A-215	ENST00000628267	PTPN23	Q9H3S7	1636 aa		31.54	■■■□□ 2.64
UBE3A-215	ENST00000628267	EID1	Q9Y6B2	187 aa		31.53	■■■□□ 2.64
UBE3A-215	ENST00000628267	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	31.52	■■■□□ 2.64
UBE3A-215	ENST00000628267	KANK1	Q14678	1352 aa		31.51	■■■□□ 2.63
UBE3A-215	ENST00000628267	DAPK1	P53355	1430 aa		31.49	■■■□□ 2.63
UBE3A-215	ENST00000628267	PHF23	Q9BUL5	403 aa	Predicted RBP	31.47	■■■□□ 2.63
UBE3A-215	ENST00000628267	STAG3	Q9UJ98	1225 aa		31.46	■■■□□ 2.63
UBE3A-215	ENST00000628267	PIK3C2B	O00750	1634 aa		31.46	■■■□□ 2.63
UBE3A-215	ENST00000628267	TMEM2	Q9UHN6	1383 aa		31.44	■■■□□ 2.62
UBE3A-215	ENST00000628267	FGD6	Q6ZV73	1430 aa		31.44	■■■□□ 2.62
UBE3A-215	ENST00000628267	ANKRD30A	Q9BXX3	1397 aa		31.43	■■■□□ 2.62
UBE3A-215	ENST00000628267	SENP3	Q9H4L4	574 aa	Predicted RBP	31.42	■■■□□ 2.62
UBE3A-215	ENST00000628267	KDM5A	P29375	1690 aa	Known RBP	31.41	■■■□□ 2.62
UBE3A-215	ENST00000628267	LMTK2	Q8IWU2	1503 aa		31.41	■■■□□ 2.62
UBE3A-215	ENST00000628267	IDI1	Q13907	227 aa		31.39	■■■□□ 2.62
UBE3A-215	ENST00000628267	CHIC2	Q9UKJ5	165 aa		31.39	■■■□□ 2.62
UBE3A-215	ENST00000628267	EFCAB6	Q5THR3	1501 aa		31.38	■■■□□ 2.61
UBE3A-215	ENST00000628267	XIRP1	Q702N8	1843 aa	Known RBP	31.37	■■■□□ 2.61
UBE3A-215	ENST00000628267	KCNA6	P17658	529 aa		31.3	■■■□□ 2.6
UBE3A-215	ENST00000628267	NOS1	P29475	1434 aa		31.3	■■■□□ 2.6
UBE3A-215	ENST00000628267	SLC52A1	Q9NWF4	448 aa		31.29	■■■□□ 2.6
UBE3A-215	ENST00000628267	FAM135B	Q49AJ0	1406 aa		31.29	■■■□□ 2.6
UBE3A-215	ENST00000628267	TET3	O43151	1660 aa		31.28	■■■□□ 2.6
UBE3A-215	ENST00000628267	TMEM94	Q12767	1356 aa		31.27	■■■□□ 2.6
UBE3A-215	ENST00000628267	ADGRL2	O95490	1459 aa		31.27	■■■□□ 2.6
UBE3A-215	ENST00000628267	SLC26A8	Q96RN1	970 aa		31.26	■■■□□ 2.59
UBE3A-215	ENST00000628267	ADGRB3	O60242	1522 aa		31.24	■■■□□ 2.59
UBE3A-215	ENST00000628267	PROSER2	Q86WR7	435 aa	Predicted RBP	31.24	■■■□□ 2.59
UBE3A-215	ENST00000628267	RPRD2	Q5VT52	1461 aa	Known RBP	31.21	■■■□□ 2.59
UBE3A-215	ENST00000628267	ANKRD50	Q9ULJ7	1429 aa		31.18	■■■□□ 2.58
UBE3A-215	ENST00000628267	FAM50A	Q14320	339 aa	Known RBP	31.18	■■■□□ 2.58
UBE3A-215	ENST00000628267	BCAN	Q96GW7	911 aa		31.18	■■■□□ 2.58
UBE3A-215	ENST00000628267	NKTR	P30414	1462 aa	Known RBP	31.17	■■■□□ 2.58

Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms