RNA–Protein interactions for RNA: ENST00000627869.1

CHRNA4-210, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-210ENST00000627869 APLP2Q06481 763 aa18.42■□□□□ 0.54
CHRNA4-210ENST00000627869 PKD2Q13563 968 aa18.42■□□□□ 0.54
CHRNA4-210ENST00000627869 CAMSAP2Q08AD1 1489 aa18.41■□□□□ 0.54
CHRNA4-210ENST00000627869 GGT6Q6P531 493 aa18.41■□□□□ 0.54
CHRNA4-210ENST00000627869 CCDC141Q6ZP82 1450 aa18.4■□□□□ 0.54
CHRNA4-210ENST00000627869 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
CHRNA4-210ENST00000627869 TSPY4P0CV99 314 aa18.39■□□□□ 0.53
CHRNA4-210ENST00000627869 TSPY10P0CW01 314 aa18.39■□□□□ 0.53
CHRNA4-210ENST00000627869 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
CHRNA4-210ENST00000627869 DHX29Q7Z478 1369 aaKnown RBP18.38■□□□□ 0.53
CHRNA4-210ENST00000627869 ALKQ9UM73 1620 aa18.37■□□□□ 0.53
CHRNA4-210ENST00000627869 DNMT1P26358 1616 aaKnown RBP18.36■□□□□ 0.53
CHRNA4-210ENST00000627869 PIP4K2BP78356 416 aa18.36■□□□□ 0.53
CHRNA4-210ENST00000627869 NEURL4Q96JN8 1562 aa18.36■□□□□ 0.53
CHRNA4-210ENST00000627869 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
CHRNA4-210ENST00000627869 MYOM3Q5VTT5 1437 aa18.33■□□□□ 0.53
CHRNA4-210ENST00000627869 MIA2Q96PC5 1412 aa18.33■□□□□ 0.53
CHRNA4-210ENST00000627869 KIF3BO15066 747 aa18.33■□□□□ 0.52
CHRNA4-210ENST00000627869 A2ML1A8K2U0 1454 aa18.33■□□□□ 0.52
CHRNA4-210ENST00000627869 POLR1AO95602 1720 aaPredicted RBP18.32■□□□□ 0.52
CHRNA4-210ENST00000627869 ADGBQ8N7X0 1667 aa18.31■□□□□ 0.52
CHRNA4-210ENST00000627869 ARHGEF5Q12774 1597 aa18.31■□□□□ 0.52
CHRNA4-210ENST00000627869 CPS1P31327 1500 aa18.3■□□□□ 0.52
CHRNA4-210ENST00000627869 SHANK2Q9UPX8 1470 aa18.3■□□□□ 0.52
CHRNA4-210ENST00000627869 TOM1O60784 492 aa18.28■□□□□ 0.52
CHRNA4-210ENST00000627869 VWDEQ8N2E2 1590 aa18.28■□□□□ 0.52
CHRNA4-210ENST00000627869 WASHC2CQ9Y4E1 1318 aa18.25■□□□□ 0.51
CHRNA4-210ENST00000627869 FBXO31Q5XUX0 539 aaPredicted RBP18.23■□□□□ 0.51
CHRNA4-210ENST00000627869 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
CHRNA4-210ENST00000627869 STRCP1A6NGW2 1772 aa18.22■□□□□ 0.51
CHRNA4-210ENST00000627869 MAST1Q9Y2H9 1570 aa18.21■□□□□ 0.51
CHRNA4-210ENST00000627869 TNRQ92752 1358 aa18.19■□□□□ 0.5
CHRNA4-210ENST00000627869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.19■□□□□ 0.5
CHRNA4-210ENST00000627869 KDM5DQ9BY66 1539 aa18.19■□□□□ 0.5
CHRNA4-210ENST00000627869 FAM135AQ9P2D6 1515 aa18.19■□□□□ 0.5
CHRNA4-210ENST00000627869 FGD6Q6ZV73 1430 aa18.19■□□□□ 0.5
CHRNA4-210ENST00000627869 RGS17Q9UGC6 210 aaPredicted RBP18.19■□□□□ 0.5
CHRNA4-210ENST00000627869 ABCC5O15440 1437 aa18.18■□□□□ 0.5
CHRNA4-210ENST00000627869 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
CHRNA4-210ENST00000627869 MED14O60244 1454 aa18.17■□□□□ 0.5
CHRNA4-210ENST00000627869 PZPP20742 1482 aa18.17■□□□□ 0.5
CHRNA4-210ENST00000627869 RRP7BPQ9NSQ0 103 aa18.16■□□□□ 0.5
CHRNA4-210ENST00000627869 DEPDC5O75140 1603 aa18.16■□□□□ 0.5
CHRNA4-210ENST00000627869 KIF15Q9NS87 1388 aa18.16■□□□□ 0.5
CHRNA4-210ENST00000627869 PTPN23Q9H3S7 1636 aa18.15■□□□□ 0.5
CHRNA4-210ENST00000627869 NPHP4O75161 1426 aaPredicted RBP18.15■□□□□ 0.5
CHRNA4-210ENST00000627869 LRRC7Q96NW7 1537 aa18.14■□□□□ 0.49
CHRNA4-210ENST00000627869 ANKLE2Q86XL3 938 aa18.14■□□□□ 0.49
CHRNA4-210ENST00000627869 DAPK1P53355 1430 aa18.14■□□□□ 0.49
CHRNA4-210ENST00000627869 DUOX2Q9NRD8 1548 aa18.13■□□□□ 0.49
CHRNA4-210ENST00000627869 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
CHRNA4-210ENST00000627869 IQGAP1P46940 1657 aa18.12■□□□□ 0.49
CHRNA4-210ENST00000627869 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
CHRNA4-210ENST00000627869 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
CHRNA4-210ENST00000627869 RNF17Q9BXT8 1623 aaKnown RBP18.11■□□□□ 0.49
CHRNA4-210ENST00000627869 ERBINQ96RT1 1412 aa18.1■□□□□ 0.49
CHRNA4-210ENST00000627869 ANKRD30AQ9BXX3 1397 aa18.1■□□□□ 0.49
CHRNA4-210ENST00000627869 EIF2AK4Q9P2K8 1649 aaKnown RBP18.09■□□□□ 0.49
CHRNA4-210ENST00000627869 ABCC3O15438 1527 aa18.09■□□□□ 0.49
CHRNA4-210ENST00000627869 NLRP1Q9C000 1473 aa18.09■□□□□ 0.49
CHRNA4-210ENST00000627869 THEMISQ8N1K5 641 aaPredicted RBP18.09■□□□□ 0.49
CHRNA4-210ENST00000627869 SYNMO15061 1565 aa18.08■□□□□ 0.48
CHRNA4-210ENST00000627869 ZC3H13Q5T200 1668 aaKnown RBP18.07■□□□□ 0.48
CHRNA4-210ENST00000627869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.07■□□□□ 0.48
CHRNA4-210ENST00000627869 XIRP1Q702N8 1843 aaKnown RBP18.05■□□□□ 0.48
CHRNA4-210ENST00000627869 CROCC2H7BZ55 1655 aa18.04■□□□□ 0.48
CHRNA4-210ENST00000627869 KANK1Q14678 1352 aa18.04■□□□□ 0.48
CHRNA4-210ENST00000627869 MROH1Q8NDA8 1641 aa18.03■□□□□ 0.48
CHRNA4-210ENST00000627869 POTEAQ6S8J7 498 aa18.03■□□□□ 0.48
CHRNA4-210ENST00000627869 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
CHRNA4-210ENST00000627869 ARHGAP31Q2M1Z3 1444 aa18■□□□□ 0.47
CHRNA4-210ENST00000627869 PRDM15P57071 1507 aaPredicted RBP18■□□□□ 0.47
CHRNA4-210ENST00000627869 ADGRL2O95490 1459 aa18■□□□□ 0.47
CHRNA4-210ENST00000627869 UBR1Q8IWV7 1749 aa17.98■□□□□ 0.47
CHRNA4-210ENST00000627869 SETD1AO15047 1707 aaKnown RBP17.96■□□□□ 0.47
CHRNA4-210ENST00000627869 PPARGC1BQ86YN6 1023 aaKnown RBP17.96■□□□□ 0.47
CHRNA4-210ENST00000627869 ANKRD50Q9ULJ7 1429 aa17.96■□□□□ 0.47
CHRNA4-210ENST00000627869 LTKP29376 864 aa17.94■□□□□ 0.46
CHRNA4-210ENST00000627869 SCAF11Q99590 1463 aaKnown RBP17.94■□□□□ 0.46
CHRNA4-210ENST00000627869 CEP152O94986 1710 aa17.93■□□□□ 0.46
CHRNA4-210ENST00000627869 FAM135BQ49AJ0 1406 aa17.93■□□□□ 0.46
CHRNA4-210ENST00000627869 ARHGAP23Q9P227 1491 aa17.93■□□□□ 0.46
CHRNA4-210ENST00000627869 LMTK2Q8IWU2 1503 aa17.93■□□□□ 0.46
CHRNA4-210ENST00000627869 STAG3Q9UJ98 1225 aa17.91■□□□□ 0.46
CHRNA4-210ENST00000627869 CFAP65Q6ZU64 1925 aaKnown RBP17.9■□□□□ 0.46
CHRNA4-210ENST00000627869 SLIT1O75093 1534 aa17.9■□□□□ 0.46
CHRNA4-210ENST00000627869 ITGAEP38570 1179 aa17.9■□□□□ 0.46
CHRNA4-210ENST00000627869 ROCK1Q13464 1354 aa17.9■□□□□ 0.46
CHRNA4-210ENST00000627869 ROBO1Q9Y6N7 1651 aa17.89■□□□□ 0.45
CHRNA4-210ENST00000627869 IDI1Q13907 227 aa17.88■□□□□ 0.45
CHRNA4-210ENST00000627869 TXNDC2Q86VQ3 553 aa17.88■□□□□ 0.45
CHRNA4-210ENST00000627869 EID1Q9Y6B2 187 aa17.88■□□□□ 0.45
CHRNA4-210ENST00000627869 RRBP1Q9P2E9 1410 aaKnown RBP17.88■□□□□ 0.45
CHRNA4-210ENST00000627869 SLC52A1Q9NWF4 448 aa17.86■□□□□ 0.45
CHRNA4-210ENST00000627869 NOS1P29475 1434 aa17.85■□□□□ 0.45
CHRNA4-210ENST00000627869 TMEM94Q12767 1356 aa17.85■□□□□ 0.45
CHRNA4-210ENST00000627869 EFCAB6Q5THR3 1501 aa17.85■□□□□ 0.45
CHRNA4-210ENST00000627869 TMEM2Q9UHN6 1383 aa17.84■□□□□ 0.45
CHRNA4-210ENST00000627869 RBM33Q96EV2 1170 aaKnown RBP17.83■□□□□ 0.44
CHRNA4-210ENST00000627869 RPRD2Q5VT52 1461 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms