RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 GCC2Q8IWJ2 1684 aa14.69□□□□□ -0.06
SOX2-OT-244ENST00000627738 RSPH4AQ5TD94 716 aa14.69□□□□□ -0.06
SOX2-OT-244ENST00000627738 CCDC141Q6ZP82 1450 aa14.69□□□□□ -0.06
SOX2-OT-244ENST00000627738 SHANK2Q9UPX8 1470 aa14.69□□□□□ -0.06
SOX2-OT-244ENST00000627738 TSPY4P0CV99 314 aa14.68□□□□□ -0.06
SOX2-OT-244ENST00000627738 TSPY10P0CW01 314 aa14.68□□□□□ -0.06
SOX2-OT-244ENST00000627738 RTN4Q9NQC3 1192 aaKnown RBP14.68□□□□□ -0.06
SOX2-OT-244ENST00000627738 ADGRL2O95490 1459 aa14.68□□□□□ -0.06
SOX2-OT-244ENST00000627738 ADGBQ8N7X0 1667 aa14.68□□□□□ -0.06
SOX2-OT-244ENST00000627738 C9orf84Q5VXU9 1444 aa14.67□□□□□ -0.06
SOX2-OT-244ENST00000627738 ABCC1P33527 1531 aa14.66□□□□□ -0.06
SOX2-OT-244ENST00000627738 ARHGEF12Q9NZN5 1544 aa14.66□□□□□ -0.06
SOX2-OT-244ENST00000627738 FANCAO15360 1455 aa14.66□□□□□ -0.06
SOX2-OT-244ENST00000627738 ANKRD30AQ9BXX3 1397 aa14.66□□□□□ -0.06
SOX2-OT-244ENST00000627738 NCOA1Q15788 1441 aa14.66□□□□□ -0.06
SOX2-OT-244ENST00000627738 CD109Q6YHK3 1445 aa14.66□□□□□ -0.06
SOX2-OT-244ENST00000627738 C19orf67A6NJJ6 358 aa14.65□□□□□ -0.06
SOX2-OT-244ENST00000627738 KDM6BO15054 1643 aa14.64□□□□□ -0.07
SOX2-OT-244ENST00000627738 MAST1Q9Y2H9 1570 aa14.62□□□□□ -0.07
SOX2-OT-244ENST00000627738 TRAPPC8Q9Y2L5 1435 aa14.62□□□□□ -0.07
SOX2-OT-244ENST00000627738 GLI2P10070 1586 aa14.61□□□□□ -0.07
SOX2-OT-244ENST00000627738 ADGRL1O94910 1474 aa14.61□□□□□ -0.07
SOX2-OT-244ENST00000627738 CLSPNQ9HAW4 1339 aa14.61□□□□□ -0.07
SOX2-OT-244ENST00000627738 SCAPERQ9BY12 1400 aa14.59□□□□□ -0.07
SOX2-OT-244ENST00000627738 FAM69CQ0P6D2 419 aa14.59□□□□□ -0.07
SOX2-OT-244ENST00000627738 TRIM52Q96A61 297 aa14.59□□□□□ -0.07
SOX2-OT-244ENST00000627738 DIP2BQ9P265 1576 aa14.59□□□□□ -0.07
SOX2-OT-244ENST00000627738 KIF15Q9NS87 1388 aa14.59□□□□□ -0.07
SOX2-OT-244ENST00000627738 MAP3K4Q9Y6R4 1608 aa14.59□□□□□ -0.07
SOX2-OT-244ENST00000627738 AFAP1Q8N556 730 aa14.58□□□□□ -0.08
SOX2-OT-244ENST00000627738 CFAP74Q9C0B2 1584 aa14.58□□□□□ -0.08
SOX2-OT-244ENST00000627738 ANKRD50Q9ULJ7 1429 aa14.58□□□□□ -0.08
SOX2-OT-244ENST00000627738 ACIN1Q9UKV3 1341 aaKnown RBP14.57□□□□□ -0.08
SOX2-OT-244ENST00000627738 SPAG9O60271 1321 aaKnown RBP14.56□□□□□ -0.08
SOX2-OT-244ENST00000627738 NEO1Q92859 1461 aa14.55□□□□□ -0.08
SOX2-OT-244ENST00000627738 PLXNC1O60486 1568 aa14.55□□□□□ -0.08
SOX2-OT-244ENST00000627738 RTEL1-TNFRSF6BF6WH68 1400 aa14.53□□□□□ -0.08
SOX2-OT-244ENST00000627738 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
SOX2-OT-244ENST00000627738 ZFYVE16Q7Z3T8 1539 aa14.52□□□□□ -0.08
SOX2-OT-244ENST00000627738 GABBR2O75899 941 aa14.52□□□□□ -0.09
SOX2-OT-244ENST00000627738 MPHOSPH9Q99550 1183 aa14.51□□□□□ -0.09
SOX2-OT-244ENST00000627738 DUOX2Q9NRD8 1548 aa14.51□□□□□ -0.09
SOX2-OT-244ENST00000627738 ZNF518AQ6AHZ1 1483 aa14.5□□□□□ -0.09
SOX2-OT-244ENST00000627738 POGZQ7Z3K3 1410 aa14.5□□□□□ -0.09
SOX2-OT-244ENST00000627738 MYT1LQ9UL68 1186 aa14.5□□□□□ -0.09
SOX2-OT-244ENST00000627738 INO80Q9ULG1 1556 aaPredicted RBP14.5□□□□□ -0.09
SOX2-OT-244ENST00000627738 ATP7AQ04656 1500 aa14.5□□□□□ -0.09
SOX2-OT-244ENST00000627738 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
SOX2-OT-244ENST00000627738 KIF13AQ9H1H9 1805 aa14.49□□□□□ -0.09
SOX2-OT-244ENST00000627738 DENND4BO75064 1496 aaPredicted RBP14.49□□□□□ -0.09
SOX2-OT-244ENST00000627738 TSPOAP1O95153 1857 aa14.48□□□□□ -0.09
SOX2-OT-244ENST00000627738 SIN3AQ96ST3 1273 aa14.48□□□□□ -0.09
SOX2-OT-244ENST00000627738 PZPP20742 1482 aa14.48□□□□□ -0.09
SOX2-OT-244ENST00000627738 PPRC1Q5VV67 1664 aaKnown RBP14.48□□□□□ -0.09
SOX2-OT-244ENST00000627738 FARP1Q9Y4F1 1045 aaPredicted RBP14.47□□□□□ -0.09
SOX2-OT-244ENST00000627738 ERBINQ96RT1 1412 aa14.47□□□□□ -0.09
SOX2-OT-244ENST00000627738 KDM5CP41229 1560 aa14.47□□□□□ -0.09
SOX2-OT-244ENST00000627738 NUP155O75694 1391 aa14.47□□□□□ -0.09
SOX2-OT-244ENST00000627738 TEX14Q8IWB6 1497 aa14.46□□□□□ -0.09
SOX2-OT-244ENST00000627738 KIDINS220Q9ULH0 1771 aa14.45□□□□□ -0.1
SOX2-OT-244ENST00000627738 RAPGEF3O95398 923 aa14.45□□□□□ -0.1
SOX2-OT-244ENST00000627738 CD44P16070 742 aaKnown RBP14.45□□□□□ -0.1
SOX2-OT-244ENST00000627738 NEUROD1Q13562 356 aa14.45□□□□□ -0.1
SOX2-OT-244ENST00000627738 KDM5DQ9BY66 1539 aa14.45□□□□□ -0.1
SOX2-OT-244ENST00000627738 MLH3Q9UHC1 1453 aa14.44□□□□□ -0.1
SOX2-OT-244ENST00000627738 HECW2Q9P2P5 1572 aa14.43□□□□□ -0.1
SOX2-OT-244ENST00000627738 UNC13BO14795 1591 aa14.43□□□□□ -0.1
SOX2-OT-244ENST00000627738 RICTORQ6R327 1708 aa14.42□□□□□ -0.1
SOX2-OT-244ENST00000627738 DHX29Q7Z478 1369 aaKnown RBP14.42□□□□□ -0.1
SOX2-OT-244ENST00000627738 PKD2Q13563 968 aa14.4□□□□□ -0.1
SOX2-OT-244ENST00000627738 FAM135AQ9P2D6 1515 aa14.4□□□□□ -0.1
SOX2-OT-244ENST00000627738 FRMPD1Q5SYB0 1578 aa14.39□□□□□ -0.11
SOX2-OT-244ENST00000627738 MAGI2Q86UL8 1455 aa14.39□□□□□ -0.11
SOX2-OT-244ENST00000627738 ANKRD30BQ9BXX2 1392 aa14.39□□□□□ -0.11
SOX2-OT-244ENST00000627738 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
SOX2-OT-244ENST00000627738 A2MP01023 1474 aa14.38□□□□□ -0.11
SOX2-OT-244ENST00000627738 ABCA6Q8N139 1617 aa14.38□□□□□ -0.11
SOX2-OT-244ENST00000627738 KIF3BO15066 747 aa14.37□□□□□ -0.11
SOX2-OT-244ENST00000627738 TIMELESSQ9UNS1 1208 aa14.37□□□□□ -0.11
SOX2-OT-244ENST00000627738 IQGAP3Q86VI3 1631 aa14.37□□□□□ -0.11
SOX2-OT-244ENST00000627738 EIF2AK4Q9P2K8 1649 aaKnown RBP14.37□□□□□ -0.11
SOX2-OT-244ENST00000627738 ZMYM4Q5VZL5 1548 aa14.36□□□□□ -0.11
SOX2-OT-244ENST00000627738 TONSLQ96HA7 1378 aa14.35□□□□□ -0.11
SOX2-OT-244ENST00000627738 DIP2CQ9Y2E4 1556 aa14.35□□□□□ -0.11
SOX2-OT-244ENST00000627738 YEATS2Q9ULM3 1422 aa14.35□□□□□ -0.11
SOX2-OT-244ENST00000627738 DEPDC5O75140 1603 aa14.35□□□□□ -0.11
SOX2-OT-244ENST00000627738 IFNLR1Q8IU57 520 aaPredicted RBP14.35□□□□□ -0.11
SOX2-OT-244ENST00000627738 COL17A1Q9UMD9 1497 aaPredicted RBP14.33□□□□□ -0.12
SOX2-OT-244ENST00000627738 KLHL34Q8N239 644 aa14.32□□□□□ -0.12
SOX2-OT-244ENST00000627738 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
SOX2-OT-244ENST00000627738 KANK1Q14678 1352 aa14.32□□□□□ -0.12
SOX2-OT-244ENST00000627738 RPRD2Q5VT52 1461 aaKnown RBP14.31□□□□□ -0.12
SOX2-OT-244ENST00000627738 MROH1Q8NDA8 1641 aa14.31□□□□□ -0.12
SOX2-OT-244ENST00000627738 PRDM15P57071 1507 aaPredicted RBP14.31□□□□□ -0.12
SOX2-OT-244ENST00000627738 VWDEQ8N2E2 1590 aa14.3□□□□□ -0.12
SOX2-OT-244ENST00000627738 CREBZFQ9NS37 354 aa14.3□□□□□ -0.12
SOX2-OT-244ENST00000627738 RNF17Q9BXT8 1623 aaKnown RBP14.3□□□□□ -0.12
SOX2-OT-244ENST00000627738 PPP1R15AO75807 674 aaPredicted RBP14.29□□□□□ -0.12
SOX2-OT-244ENST00000627738 BCORL1Q5H9F3 1711 aa14.29□□□□□ -0.12
SOX2-OT-244ENST00000627738 ATP10AO60312 1499 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms