RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 PTPRTO14522 1441 aa40.2■■■■■ 4.03
TCF4-259ENST00000627568 CERKQ8TCT0 537 aa40.19■■■■■ 4.02
TCF4-259ENST00000627568 CAMSAP1Q5T5Y3 1602 aa40.19■■■■■ 4.02
TCF4-259ENST00000627568 CEP170BQ9Y4F5 1589 aaPredicted RBP40.16■■■■■ 4.02
TCF4-259ENST00000627568 WASHC2CQ9Y4E1 1318 aa40.14■■■■■ 4.02
TCF4-259ENST00000627568 PTPN23Q9H3S7 1636 aa40.09■■■■■ 4.01
TCF4-259ENST00000627568 EIF2AK4Q9P2K8 1649 aaKnown RBP40.09■■■■■ 4.01
TCF4-259ENST00000627568 PZPP20742 1482 aa40.08■■■■■ 4.01
TCF4-259ENST00000627568 RNF17Q9BXT8 1623 aaKnown RBP40.08■■■■■ 4.01
TCF4-259ENST00000627568 PLA2R1Q13018 1463 aa40.05■■■■■ 4
TCF4-259ENST00000627568 CROCC2H7BZ55 1655 aa40.05■■■■■ 4
TCF4-259ENST00000627568 A2ML1A8K2U0 1454 aa40.03■■■■■ 4
TCF4-259ENST00000627568 SHANK2Q9UPX8 1470 aa40.03■■■■■ 4
TCF4-259ENST00000627568 TNRQ92752 1358 aa40.02■■■■■ 4
TCF4-259ENST00000627568 FGD6Q6ZV73 1430 aa40.01■■■■■ 4
TCF4-259ENST00000627568 ZC3H13Q5T200 1668 aaKnown RBP40.01■■■■■ 4
TCF4-259ENST00000627568 DUOX2Q9NRD8 1548 aa40.01■■■■□ 3.99
TCF4-259ENST00000627568 FBXO31Q5XUX0 539 aaPredicted RBP39.99■■■■□ 3.99
TCF4-259ENST00000627568 NCKAP5LQ9HCH0 1330 aa39.97■■■■□ 3.99
TCF4-259ENST00000627568 PKD2Q13563 968 aa39.97■■■■□ 3.99
TCF4-259ENST00000627568 ABCC5O15440 1437 aa39.97■■■■□ 3.99
TCF4-259ENST00000627568 DNMT1P26358 1616 aaKnown RBP39.96■■■■□ 3.99
TCF4-259ENST00000627568 TCOF1Q13428 1488 aaKnown RBP39.95■■■■□ 3.99
TCF4-259ENST00000627568 ABCC3O15438 1527 aa39.95■■■■□ 3.99
TCF4-259ENST00000627568 DAPK1P53355 1430 aa39.94■■■■□ 3.98
TCF4-259ENST00000627568 KIF15Q9NS87 1388 aa39.94■■■■□ 3.98
TCF4-259ENST00000627568 MROH1Q8NDA8 1641 aa39.9■■■■□ 3.98
TCF4-259ENST00000627568 LTBP4Q8N2S1 1624 aa39.88■■■■□ 3.97
TCF4-259ENST00000627568 ERBINQ96RT1 1412 aa39.88■■■■□ 3.97
TCF4-259ENST00000627568 NLRP1Q9C000 1473 aa39.88■■■■□ 3.97
TCF4-259ENST00000627568 CEP152O94986 1710 aa39.85■■■■□ 3.97
TCF4-259ENST00000627568 RRP7BPQ9NSQ0 103 aa39.85■■■■□ 3.97
TCF4-259ENST00000627568 POLR1AO95602 1720 aaPredicted RBP39.82■■■■□ 3.96
TCF4-259ENST00000627568 PRDM15P57071 1507 aaPredicted RBP39.81■■■■□ 3.96
TCF4-259ENST00000627568 SPATA31D1Q6ZQQ2 1576 aa39.8■■■■□ 3.96
TCF4-259ENST00000627568 ANKRD30AQ9BXX3 1397 aa39.79■■■■□ 3.96
TCF4-259ENST00000627568 UGGT1Q9NYU2 1555 aa39.79■■■■□ 3.96
TCF4-259ENST00000627568 IQSEC2Q5JU85 1478 aa39.77■■■■□ 3.96
TCF4-259ENST00000627568 ERVK-7P63135 1459 aa39.76■■■■□ 3.96
TCF4-259ENST00000627568 ZNF335Q9H4Z2 1342 aaPredicted RBP39.75■■■■□ 3.95
TCF4-259ENST00000627568 THEMISQ8N1K5 641 aaPredicted RBP39.75■■■■□ 3.95
TCF4-259ENST00000627568 CHIC2Q9UKJ5 165 aa39.75■■■■□ 3.95
TCF4-259ENST00000627568 CFAP65Q6ZU64 1925 aaKnown RBP39.73■■■■□ 3.95
TCF4-259ENST00000627568 DEPDC5O75140 1603 aa39.72■■■■□ 3.95
TCF4-259ENST00000627568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.72■■■■□ 3.95
TCF4-259ENST00000627568 FAM50AQ14320 339 aaKnown RBP39.71■■■■□ 3.95
TCF4-259ENST00000627568 NEURL4Q96JN8 1562 aa39.69■■■■□ 3.94
TCF4-259ENST00000627568 KANK1Q14678 1352 aa39.69■■■■□ 3.94
TCF4-259ENST00000627568 ANKLE2Q86XL3 938 aa39.68■■■■□ 3.94
TCF4-259ENST00000627568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.68■■■■□ 3.94
TCF4-259ENST00000627568 ARHGAP31Q2M1Z3 1444 aa39.65■■■■□ 3.94
TCF4-259ENST00000627568 ADGRL2O95490 1459 aa39.64■■■■□ 3.94
TCF4-259ENST00000627568 NPHP4O75161 1426 aaPredicted RBP39.56■■■■□ 3.92
TCF4-259ENST00000627568 MED14O60244 1454 aa39.55■■■■□ 3.92
TCF4-259ENST00000627568 UBR1Q8IWV7 1749 aa39.54■■■■□ 3.92
TCF4-259ENST00000627568 LMTK2Q8IWU2 1503 aa39.54■■■■□ 3.92
TCF4-259ENST00000627568 VWDEQ8N2E2 1590 aa39.53■■■■□ 3.92
TCF4-259ENST00000627568 IQGAP1P46940 1657 aa39.51■■■■□ 3.92
TCF4-259ENST00000627568 CPS1P31327 1500 aa39.49■■■■□ 3.91
TCF4-259ENST00000627568 ANKRD50Q9ULJ7 1429 aa39.48■■■■□ 3.91
TCF4-259ENST00000627568 EFCAB6Q5THR3 1501 aa39.44■■■■□ 3.9
TCF4-259ENST00000627568 UBAP1LF5GYI3 381 aa39.43■■■■□ 3.9
TCF4-259ENST00000627568 PIK3C2BO00750 1634 aa39.41■■■■□ 3.9
TCF4-259ENST00000627568 SCAF11Q99590 1463 aaKnown RBP39.4■■■■□ 3.9
TCF4-259ENST00000627568 SLIT1O75093 1534 aa39.39■■■■□ 3.9
TCF4-259ENST00000627568 STAG3Q9UJ98 1225 aa39.38■■■■□ 3.89
TCF4-259ENST00000627568 ARHGAP23Q9P227 1491 aa39.37■■■■□ 3.89
TCF4-259ENST00000627568 ROCK1Q13464 1354 aa39.33■■■■□ 3.89
TCF4-259ENST00000627568 KDM5AP29375 1690 aaKnown RBP39.33■■■■□ 3.89
TCF4-259ENST00000627568 SYNMO15061 1565 aa39.33■■■■□ 3.89
TCF4-259ENST00000627568 EID1Q9Y6B2 187 aa39.32■■■■□ 3.89
TCF4-259ENST00000627568 TXNDC2Q86VQ3 553 aa39.31■■■■□ 3.88
TCF4-259ENST00000627568 NOS1P29475 1434 aa39.31■■■■□ 3.88
TCF4-259ENST00000627568 RPRD2Q5VT52 1461 aaKnown RBP39.3■■■■□ 3.88
TCF4-259ENST00000627568 PPARGC1BQ86YN6 1023 aaKnown RBP39.3■■■■□ 3.88
TCF4-259ENST00000627568 TET3O43151 1660 aa39.29■■■■□ 3.88
TCF4-259ENST00000627568 UNC13BO14795 1591 aa39.29■■■■□ 3.88
TCF4-259ENST00000627568 TMEM2Q9UHN6 1383 aa39.28■■■■□ 3.88
TCF4-259ENST00000627568 LTKP29376 864 aa39.27■■■■□ 3.88
TCF4-259ENST00000627568 IDI1Q13907 227 aa39.27■■■■□ 3.88
TCF4-259ENST00000627568 GCC2Q8IWJ2 1684 aa39.24■■■■□ 3.87
TCF4-259ENST00000627568 ITGAEP38570 1179 aa39.23■■■■□ 3.87
TCF4-259ENST00000627568 ADGRB3O60242 1522 aa39.23■■■■□ 3.87
TCF4-259ENST00000627568 TOM1O60784 492 aa39.22■■■■□ 3.87
TCF4-259ENST00000627568 STRCP1A6NGW2 1772 aa39.21■■■■□ 3.87
TCF4-259ENST00000627568 SLC52A1Q9NWF4 448 aa39.21■■■■□ 3.87
TCF4-259ENST00000627568 SCAF1Q9H7N4 1312 aaKnown RBP39.18■■■■□ 3.86
TCF4-259ENST00000627568 DISP3Q9P2K9 1392 aa39.15■■■■□ 3.86
TCF4-259ENST00000627568 PIP4K2BP78356 416 aa39.14■■■■□ 3.86
TCF4-259ENST00000627568 LRRC7Q96NW7 1537 aa39.14■■■■□ 3.86
TCF4-259ENST00000627568 IQGAP3Q86VI3 1631 aa39.13■■■■□ 3.85
TCF4-259ENST00000627568 E9PCH4 1651 aa39.09■■■■□ 3.85
TCF4-259ENST00000627568 NUP155O75694 1391 aa39.06■■■■□ 3.84
TCF4-259ENST00000627568 MYO5BQ9ULV0 1848 aa39.05■■■■□ 3.84
TCF4-259ENST00000627568 RRBP1Q9P2E9 1410 aaKnown RBP39.03■■■■□ 3.84
TCF4-259ENST00000627568 TMEM131LA2VDJ0 1609 aa39■■■■□ 3.83
TCF4-259ENST00000627568 ALKQ9UM73 1620 aa38.99■■■■□ 3.83
TCF4-259ENST00000627568 BCANQ96GW7 911 aa38.97■■■■□ 3.83
TCF4-259ENST00000627568 HSPA1LP34931 641 aa38.96■■■■□ 3.83
TCF4-259ENST00000627568 HDGFP51858 240 aaKnown RBP38.96■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms