RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 ERBINQ96RT1 1412 aa28.16■■■□□ 2.1
PBX1-222ENST00000627490 FRMPD1Q5SYB0 1578 aa28.16■■■□□ 2.1
PBX1-222ENST00000627490 ZMYM4Q5VZL5 1548 aa28.15■■■□□ 2.1
PBX1-222ENST00000627490 HIRIP3Q9BW71 556 aaPredicted RBP28.15■■■□□ 2.1
PBX1-222ENST00000627490 TRIM52Q96A61 297 aa28.13■■■□□ 2.09
PBX1-222ENST00000627490 MPHOSPH9Q99550 1183 aa28.13■■■□□ 2.09
PBX1-222ENST00000627490 KDM5DQ9BY66 1539 aa28.1■■■□□ 2.09
PBX1-222ENST00000627490 UNC13BO14795 1591 aa28.09■■■□□ 2.09
PBX1-222ENST00000627490 EIF2AK4Q9P2K8 1649 aaKnown RBP28.08■■■□□ 2.09
PBX1-222ENST00000627490 NEFLP07196 543 aa28.07■■■□□ 2.08
PBX1-222ENST00000627490 MAGI2Q86UL8 1455 aa28.07■■■□□ 2.08
PBX1-222ENST00000627490 EIF4G2P78344 907 aaKnown RBP eCLIP28.06■■■□□ 2.08
PBX1-222ENST00000627490 ABCA6Q8N139 1617 aa28.06■■■□□ 2.08
PBX1-222ENST00000627490 RAPGEF3O95398 923 aa28.04■■■□□ 2.08
PBX1-222ENST00000627490 HSPA5P11021 654 aaKnown RBP28.04■■■□□ 2.08
PBX1-222ENST00000627490 RPRD2Q5VT52 1461 aaKnown RBP28.04■■■□□ 2.08
PBX1-222ENST00000627490 DHX29Q7Z478 1369 aaKnown RBP28.03■■■□□ 2.08
PBX1-222ENST00000627490 ANKRD30BQ9BXX2 1392 aa28.03■■■□□ 2.08
PBX1-222ENST00000627490 DIP2CQ9Y2E4 1556 aa28.02■■■□□ 2.08
PBX1-222ENST00000627490 BCORL1Q5H9F3 1711 aa28.02■■■□□ 2.08
PBX1-222ENST00000627490 DEPDC5O75140 1603 aa28.01■■■□□ 2.07
PBX1-222ENST00000627490 TSHZ2Q9NRE2 1034 aa28.01■■■□□ 2.07
PBX1-222ENST00000627490 A2MP01023 1474 aa28■■■□□ 2.07
PBX1-222ENST00000627490 PZPP20742 1482 aa28■■■□□ 2.07
PBX1-222ENST00000627490 FKBP8Q14318 412 aa28■■■□□ 2.07
PBX1-222ENST00000627490 COL17A1Q9UMD9 1497 aaPredicted RBP27.98■■■□□ 2.07
PBX1-222ENST00000627490 WASHC2AQ641Q2 1341 aa27.97■■■□□ 2.07
PBX1-222ENST00000627490 CNTLNQ9NXG0 1405 aa27.97■■■□□ 2.07
PBX1-222ENST00000627490 MYT1LQ9UL68 1186 aa27.96■■■□□ 2.07
PBX1-222ENST00000627490 IQGAP3Q86VI3 1631 aa27.96■■■□□ 2.07
PBX1-222ENST00000627490 TRHP20396 242 aaPredicted RBP27.96■■■□□ 2.07
PBX1-222ENST00000627490 L3MBTL2Q969R5 705 aa27.96■■■□□ 2.07
PBX1-222ENST00000627490 REREQ9P2R6 1566 aa27.95■■■□□ 2.07
PBX1-222ENST00000627490 RNF17Q9BXT8 1623 aaKnown RBP27.93■■■□□ 2.06
PBX1-222ENST00000627490 NUP155O75694 1391 aa27.92■■■□□ 2.06
PBX1-222ENST00000627490 POLR1AO95602 1720 aaPredicted RBP27.92■■■□□ 2.06
PBX1-222ENST00000627490 YEATS2Q9ULM3 1422 aa27.91■■■□□ 2.06
PBX1-222ENST00000627490 PRDM15P57071 1507 aaPredicted RBP27.91■■■□□ 2.06
PBX1-222ENST00000627490 FAM135AQ9P2D6 1515 aa27.91■■■□□ 2.06
PBX1-222ENST00000627490 ARHGEF40Q8TER5 1519 aa27.9■■■□□ 2.06
PBX1-222ENST00000627490 VWDEQ8N2E2 1590 aa27.89■■■□□ 2.05
PBX1-222ENST00000627490 CCDC7Q96M83 1385 aa27.88■■■□□ 2.05
PBX1-222ENST00000627490 MROH1Q8NDA8 1641 aa27.88■■■□□ 2.05
PBX1-222ENST00000627490 ATP10AO60312 1499 aa27.87■■■□□ 2.05
PBX1-222ENST00000627490 SLC4A1APQ9BWU0 796 aaKnown RBP27.87■■■□□ 2.05
PBX1-222ENST00000627490 SPATA31E1Q6ZUB1 1445 aa27.83■■■□□ 2.05
PBX1-222ENST00000627490 AGLP35573 1532 aa27.82■■■□□ 2.04
PBX1-222ENST00000627490 KIF3BO15066 747 aa27.81■■■□□ 2.04
PBX1-222ENST00000627490 TET3O43151 1660 aa27.79■■■□□ 2.04
PBX1-222ENST00000627490 ERICH6BQ5W0A0 696 aa27.78■■■□□ 2.04
PBX1-222ENST00000627490 KANK1Q14678 1352 aa27.78■■■□□ 2.04
PBX1-222ENST00000627490 LMTK2Q8IWU2 1503 aa27.78■■■□□ 2.04
PBX1-222ENST00000627490 BCANQ96GW7 911 aa27.78■■■□□ 2.04
PBX1-222ENST00000627490 HNRNPUQ00839 825 aaKnown RBP eCLIP27.77■■■□□ 2.04
PBX1-222ENST00000627490 FOXD1Q16676 465 aa27.77■■■□□ 2.04
PBX1-222ENST00000627490 NBPF8Q3BBV2 869 aa27.76■■■□□ 2.03
PBX1-222ENST00000627490 PKD2Q13563 968 aa27.75■■■□□ 2.03
PBX1-222ENST00000627490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.73■■■□□ 2.03
PBX1-222ENST00000627490 ZC3H13Q5T200 1668 aaKnown RBP27.73■■■□□ 2.03
PBX1-222ENST00000627490 PRKRIP1Q9H875 184 aaPredicted RBP27.73■■■□□ 2.03
PBX1-222ENST00000627490 E9PCH4 1651 aa27.7■■■□□ 2.02
PBX1-222ENST00000627490 ARID4BQ4LE39 1312 aaPredicted RBP27.69■■■□□ 2.02
PBX1-222ENST00000627490 CEP152O94986 1710 aa27.69■■■□□ 2.02
PBX1-222ENST00000627490 SIGLEC1Q9BZZ2 1709 aa27.69■■■□□ 2.02
PBX1-222ENST00000627490 C11orf95C9JLR9 678 aaPredicted RBP27.68■■■□□ 2.02
PBX1-222ENST00000627490 EFCAB6Q5THR3 1501 aa27.68■■■□□ 2.02
PBX1-222ENST00000627490 KIF7Q2M1P5 1343 aa27.66■■■□□ 2.02
PBX1-222ENST00000627490 ABCC3O15438 1527 aa27.66■■■□□ 2.02
PBX1-222ENST00000627490 UHRF1BP1Q6BDS2 1440 aa27.64■■■□□ 2.01
PBX1-222ENST00000627490 PPP6R1Q9UPN7 881 aa27.63■■■□□ 2.01
PBX1-222ENST00000627490 CAMSAP1Q5T5Y3 1602 aa27.61■■■□□ 2.01
PBX1-222ENST00000627490 SPHKAPQ2M3C7 1700 aa27.61■■■□□ 2.01
PBX1-222ENST00000627490 GGT6Q6P531 493 aa27.6■■■□□ 2.01
PBX1-222ENST00000627490 ZBED9Q6R2W3 1325 aa27.6■■■□□ 2.01
PBX1-222ENST00000627490 PLA2R1Q13018 1463 aa27.59■■■□□ 2.01
PBX1-222ENST00000627490 PTPRTO14522 1441 aa27.59■■■□□ 2.01
PBX1-222ENST00000627490 TRPM2O94759 1503 aa27.58■■■□□ 2.01
PBX1-222ENST00000627490 ARHGAP31Q2M1Z3 1444 aa27.57■■■□□ 2
PBX1-222ENST00000627490 MRS2Q9HD23 443 aa27.56■■■□□ 2
PBX1-222ENST00000627490 RALGAPBQ86X10 1494 aa27.56■■■□□ 2
PBX1-222ENST00000627490 ROCK2O75116 1388 aaKnown RBP27.55■■■□□ 2
PBX1-222ENST00000627490 WASHC2CQ9Y4E1 1318 aa27.54■■■□□ 2
PBX1-222ENST00000627490 USP47Q96K76 1375 aa27.54■■■□□ 2
PBX1-222ENST00000627490 CCDC144AA2RUR9 1427 aa27.52■■■□□ 2
PBX1-222ENST00000627490 NPATQ14207 1427 aa27.52■■■□□ 2
PBX1-222ENST00000627490 ANP32EQ9BTT0 268 aa27.51■■□□□ 1.99
PBX1-222ENST00000627490 CCDC184Q52MB2 194 aa27.5■■□□□ 1.99
PBX1-222ENST00000627490 RBM19Q9Y4C8 960 aaKnown RBP27.5■■□□□ 1.99
PBX1-222ENST00000627490 PPP4R2Q9NY27 417 aa27.47■■□□□ 1.99
PBX1-222ENST00000627490 CLTCQ00610 1675 aaKnown RBP27.46■■□□□ 1.99
PBX1-222ENST00000627490 NEURL4Q96JN8 1562 aa27.46■■□□□ 1.99
PBX1-222ENST00000627490 CLTCL1P53675 1640 aa27.44■■□□□ 1.98
PBX1-222ENST00000627490 FAM9BQ8IZU0 186 aa27.44■■□□□ 1.98
PBX1-222ENST00000627490 NOS1P29475 1434 aa27.44■■□□□ 1.98
PBX1-222ENST00000627490 MROH2AA6NES4 1674 aa27.42■■□□□ 1.98
PBX1-222ENST00000627490 PREX1Q8TCU6 1659 aa27.4■■□□□ 1.98
PBX1-222ENST00000627490 KTN1Q86UP2 1357 aaKnown RBP27.4■■□□□ 1.98
PBX1-222ENST00000627490 PIK3C2BO00750 1634 aa27.38■■□□□ 1.97
PBX1-222ENST00000627490 SMG6Q86US8 1419 aaKnown RBP27.38■■□□□ 1.97
PBX1-222ENST00000627490 SYNMO15061 1565 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms