RNA–Protein interactions for RNA: ENST00000627300.2

LINC01440-208, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-208ENST00000627300 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
LINC01440-208ENST00000627300 ATP10BO94823 1461 aa11.56□□□□□ -0.56
LINC01440-208ENST00000627300 C3P01024 1663 aa11.55□□□□□ -0.56
LINC01440-208ENST00000627300 NPATQ14207 1427 aa11.55□□□□□ -0.56
LINC01440-208ENST00000627300 HECW1Q76N89 1606 aa11.55□□□□□ -0.56
LINC01440-208ENST00000627300 CARMIL1Q5VZK9 1371 aa11.54□□□□□ -0.56
LINC01440-208ENST00000627300 RBM33Q96EV2 1170 aaKnown RBP11.53□□□□□ -0.56
LINC01440-208ENST00000627300 SETBP1Q9Y6X0 1596 aa11.53□□□□□ -0.56
LINC01440-208ENST00000627300 PCDH10Q9P2E7 1040 aa11.52□□□□□ -0.57
LINC01440-208ENST00000627300 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
LINC01440-208ENST00000627300 STAG3Q9UJ98 1225 aa11.51□□□□□ -0.57
LINC01440-208ENST00000627300 SPDYE4A6NLX3 237 aa11.5□□□□□ -0.57
LINC01440-208ENST00000627300 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
LINC01440-208ENST00000627300 CEP162Q5TB80 1403 aa11.5□□□□□ -0.57
LINC01440-208ENST00000627300 TRIM52Q96A61 297 aa11.49□□□□□ -0.57
LINC01440-208ENST00000627300 OTUD5Q96G74 571 aa11.48□□□□□ -0.57
LINC01440-208ENST00000627300 CDK12Q9NYV4 1490 aaPredicted RBP11.48□□□□□ -0.57
LINC01440-208ENST00000627300 LRRC7Q96NW7 1537 aa11.48□□□□□ -0.57
LINC01440-208ENST00000627300 VWDEQ8N2E2 1590 aa11.47□□□□□ -0.57
LINC01440-208ENST00000627300 AGLP35573 1532 aa11.46□□□□□ -0.57
LINC01440-208ENST00000627300 FAM135BQ49AJ0 1406 aa11.46□□□□□ -0.57
LINC01440-208ENST00000627300 CNTLNQ9NXG0 1405 aa11.46□□□□□ -0.57
LINC01440-208ENST00000627300 ZNF772Q68DY9 489 aaPredicted RBP11.44□□□□□ -0.58
LINC01440-208ENST00000627300 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
LINC01440-208ENST00000627300 SCAPERQ9BY12 1400 aa11.43□□□□□ -0.58
LINC01440-208ENST00000627300 ZNF142P52746 1687 aaPredicted RBP11.43□□□□□ -0.58
LINC01440-208ENST00000627300 CFAP74Q9C0B2 1584 aa11.42□□□□□ -0.58
LINC01440-208ENST00000627300 REREQ9P2R6 1566 aa11.42□□□□□ -0.58
LINC01440-208ENST00000627300 POTEMA6NI47 508 aa11.42□□□□□ -0.58
LINC01440-208ENST00000627300 ARID3CA6NKF2 412 aa11.42□□□□□ -0.58
LINC01440-208ENST00000627300 CLIP1P30622 1438 aa11.42□□□□□ -0.58
LINC01440-208ENST00000627300 RXRBP28702 533 aa11.41□□□□□ -0.58
LINC01440-208ENST00000627300 ESF1Q9H501 851 aaKnown RBP11.41□□□□□ -0.58
LINC01440-208ENST00000627300 RNF17Q9BXT8 1623 aaKnown RBP11.41□□□□□ -0.58
LINC01440-208ENST00000627300 NEURL4Q96JN8 1562 aa11.41□□□□□ -0.58
LINC01440-208ENST00000627300 CEP170BQ9Y4F5 1589 aaPredicted RBP11.41□□□□□ -0.58
LINC01440-208ENST00000627300 ZMYM3Q14202 1370 aa11.41□□□□□ -0.58
LINC01440-208ENST00000627300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.4□□□□□ -0.58
LINC01440-208ENST00000627300 GALR2O43603 387 aaPredicted RBP11.4□□□□□ -0.58
LINC01440-208ENST00000627300 PCGF6Q9BYE7 350 aa11.4□□□□□ -0.58
LINC01440-208ENST00000627300 CREBZFQ9NS37 354 aa11.4□□□□□ -0.58
LINC01440-208ENST00000627300 POTEGQ6S5H5 508 aa11.37□□□□□ -0.59
LINC01440-208ENST00000627300 MYO3AQ8NEV4 1616 aa11.35□□□□□ -0.59
LINC01440-208ENST00000627300 YY1P25490 414 aa11.35□□□□□ -0.59
LINC01440-208ENST00000627300 LRP5O75197 1615 aa11.35□□□□□ -0.59
LINC01440-208ENST00000627300 VPS8Q8N3P4 1428 aa11.34□□□□□ -0.59
LINC01440-208ENST00000627300 MED14O60244 1454 aa11.33□□□□□ -0.6
LINC01440-208ENST00000627300 JCADQ9P266 1359 aa11.33□□□□□ -0.6
LINC01440-208ENST00000627300 POTEB2H3BUK9 544 aa11.33□□□□□ -0.6
LINC01440-208ENST00000627300 MAMSTRQ6ZN01 415 aa11.33□□□□□ -0.6
LINC01440-208ENST00000627300 DIP2CQ9Y2E4 1556 aa11.33□□□□□ -0.6
LINC01440-208ENST00000627300 A2ML1A8K2U0 1454 aa11.32□□□□□ -0.6
LINC01440-208ENST00000627300 LRP6O75581 1613 aa11.31□□□□□ -0.6
LINC01440-208ENST00000627300 MROH2AA6NES4 1674 aa11.31□□□□□ -0.6
LINC01440-208ENST00000627300 SYNMO15061 1565 aa11.3□□□□□ -0.6
LINC01440-208ENST00000627300 KDM5CP41229 1560 aa11.3□□□□□ -0.6
LINC01440-208ENST00000627300 RGS12O14924 1447 aa11.3□□□□□ -0.6
LINC01440-208ENST00000627300 PLCH2O75038 1416 aa11.3□□□□□ -0.6
LINC01440-208ENST00000627300 DNMT1P26358 1616 aaKnown RBP11.3□□□□□ -0.6
LINC01440-208ENST00000627300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC01440-208ENST00000627300 AFAP1Q8N556 730 aa11.29□□□□□ -0.6
LINC01440-208ENST00000627300 ZNF518AQ6AHZ1 1483 aa11.29□□□□□ -0.6
LINC01440-208ENST00000627300 CDK13Q14004 1512 aaKnown RBP11.29□□□□□ -0.6
LINC01440-208ENST00000627300 STRCP1A6NGW2 1772 aa11.28□□□□□ -0.6
LINC01440-208ENST00000627300 C7P10643 843 aa11.28□□□□□ -0.6
LINC01440-208ENST00000627300 ANKLE2Q86XL3 938 aa11.28□□□□□ -0.6
LINC01440-208ENST00000627300 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
LINC01440-208ENST00000627300 SPATA31A6Q5VVP1 1343 aa11.28□□□□□ -0.6
LINC01440-208ENST00000627300 NPHP4O75161 1426 aaPredicted RBP11.27□□□□□ -0.6
LINC01440-208ENST00000627300 MLH3Q9UHC1 1453 aa11.27□□□□□ -0.6
LINC01440-208ENST00000627300 SENP3-EIF4A1A0A087X0R7 540 aa11.27□□□□□ -0.61
LINC01440-208ENST00000627300 ASTLQ6HA08 431 aaPredicted RBP11.27□□□□□ -0.61
LINC01440-208ENST00000627300 ATAD2Q6PL18 1390 aa11.26□□□□□ -0.61
LINC01440-208ENST00000627300 PLEKHD1A6NEE1 506 aa11.25□□□□□ -0.61
LINC01440-208ENST00000627300 SLC34A2O95436 690 aa11.25□□□□□ -0.61
LINC01440-208ENST00000627300 ARHGAP35Q9NRY4 1499 aa11.25□□□□□ -0.61
LINC01440-208ENST00000627300 EP400Q96L91 3159 aa11.24□□□□□ -0.61
LINC01440-208ENST00000627300 POLR1AO95602 1720 aaPredicted RBP11.24□□□□□ -0.61
LINC01440-208ENST00000627300 CCDC125Q86Z20 511 aa11.24□□□□□ -0.61
LINC01440-208ENST00000627300 PROM2Q8N271 834 aa11.24□□□□□ -0.61
LINC01440-208ENST00000627300 RAPGEF6Q8TEU7 1601 aa11.24□□□□□ -0.61
LINC01440-208ENST00000627300 SUPT6HQ7KZ85 1726 aaKnown RBP11.23□□□□□ -0.61
LINC01440-208ENST00000627300 CEP350Q5VT06 3117 aa11.23□□□□□ -0.61
LINC01440-208ENST00000627300 PHF12Q96QT6 1004 aa11.23□□□□□ -0.61
LINC01440-208ENST00000627300 NUTM2BA6NNL0 878 aaPredicted RBP11.22□□□□□ -0.61
LINC01440-208ENST00000627300 NUTM2EB1AL46 878 aaPredicted RBP11.22□□□□□ -0.61
LINC01440-208ENST00000627300 DEPDC5O75140 1603 aa11.22□□□□□ -0.61
LINC01440-208ENST00000627300 HRCP23327 699 aa11.22□□□□□ -0.61
LINC01440-208ENST00000627300 NUP153P49790 1475 aaKnown RBP11.22□□□□□ -0.61
LINC01440-208ENST00000627300 RBM6P78332 1123 aaKnown RBP11.22□□□□□ -0.61
LINC01440-208ENST00000627300 NUTM2DQ5VT03 806 aaPredicted RBP11.22□□□□□ -0.61
LINC01440-208ENST00000627300 NUTM2AQ8IVF1 878 aaPredicted RBP11.22□□□□□ -0.61
LINC01440-208ENST00000627300 ABCA6Q8N139 1617 aa11.22□□□□□ -0.61
LINC01440-208ENST00000627300 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
LINC01440-208ENST00000627300 FGD6Q6ZV73 1430 aa11.21□□□□□ -0.61
LINC01440-208ENST00000627300 RANGAP1P46060 587 aaPredicted RBP11.21□□□□□ -0.61
LINC01440-208ENST00000627300 MEX3CQ5U5Q3 659 aaKnown RBP11.21□□□□□ -0.61
LINC01440-208ENST00000627300 EFCAB2Q5VUJ9 269 aa11.21□□□□□ -0.61
LINC01440-208ENST00000627300 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
LINC01440-208ENST00000627300 MAP3K1Q13233 1512 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms