RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 BCANQ96GW7 911 aa10.04□□□□□ -0.8
CTNNA1-244ENST00000627109 NBPF8Q3BBV2 869 aa10.04□□□□□ -0.8
CTNNA1-244ENST00000627109 CFDP1Q9UEE9 299 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-244ENST00000627109 ATP10AO60312 1499 aa10.04□□□□□ -0.8
CTNNA1-244ENST00000627109 ZCCHC11Q5TAX3 1644 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-244ENST00000627109 EIF4G2P78344 907 aaKnown RBP eCLIP10.03□□□□□ -0.82e-6■■■□□ 17.4
CTNNA1-244ENST00000627109 SLC4A1APQ9BWU0 796 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-244ENST00000627109 FAM135AQ9P2D6 1515 aa10.03□□□□□ -0.8
CTNNA1-244ENST00000627109 ARID4BQ4LE39 1312 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-244ENST00000627109 HOMEZQ8IX15 550 aa10.02□□□□□ -0.8
CTNNA1-244ENST00000627109 DEPDC5O75140 1603 aa10.02□□□□□ -0.81
CTNNA1-244ENST00000627109 RNF17Q9BXT8 1623 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-244ENST00000627109 PLEKHH2Q8IVE3 1493 aa10.01□□□□□ -0.81
CTNNA1-244ENST00000627109 TRIM52Q96A61 297 aa10.01□□□□□ -0.81
CTNNA1-244ENST00000627109 SYCP2Q9BX26 1530 aa10□□□□□ -0.81
CTNNA1-244ENST00000627109 ARXQ96QS3 562 aa10□□□□□ -0.81
CTNNA1-244ENST00000627109 DHX29Q7Z478 1369 aaKnown RBP10□□□□□ -0.81
CTNNA1-244ENST00000627109 C11orf95C9JLR9 678 aaPredicted RBP10□□□□□ -0.81
CTNNA1-244ENST00000627109 NEURL4Q96JN8 1562 aa9.99□□□□□ -0.81
CTNNA1-244ENST00000627109 ABCC1P33527 1531 aa9.99□□□□□ -0.81
CTNNA1-244ENST00000627109 RSPH4AQ5TD94 716 aa9.99□□□□□ -0.81
CTNNA1-244ENST00000627109 C14orf37Q86TY3 774 aa9.99□□□□□ -0.81
CTNNA1-244ENST00000627109 DUOX2Q9NRD8 1548 aa9.99□□□□□ -0.81
CTNNA1-244ENST00000627109 EIF2AK4Q9P2K8 1649 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-244ENST00000627109 ASXL2Q76L83 1435 aa9.98□□□□□ -0.81
CTNNA1-244ENST00000627109 KIF15Q9NS87 1388 aa9.97□□□□□ -0.81
CTNNA1-244ENST00000627109 PRDM15P57071 1507 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-244ENST00000627109 FOXD1Q16676 465 aa9.97□□□□□ -0.81
CTNNA1-244ENST00000627109 ERBINQ96RT1 1412 aa9.97□□□□□ -0.81
CTNNA1-244ENST00000627109 ABCA9Q8IUA7 1624 aa9.97□□□□□ -0.81
CTNNA1-244ENST00000627109 KIF7Q2M1P5 1343 aa9.97□□□□□ -0.81
CTNNA1-244ENST00000627109 NEFLP07196 543 aa9.97□□□□□ -0.81
CTNNA1-244ENST00000627109 CNGB1Q14028 1251 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-244ENST00000627109 PLA2R1Q13018 1463 aa9.96□□□□□ -0.81
CTNNA1-244ENST00000627109 CEP152O94986 1710 aa9.96□□□□□ -0.81
CTNNA1-244ENST00000627109 EFCAB2Q5VUJ9 269 aa9.96□□□□□ -0.82
CTNNA1-244ENST00000627109 VWDEQ8N2E2 1590 aa9.96□□□□□ -0.82
CTNNA1-244ENST00000627109 GPRASP1Q5JY77 1395 aa9.96□□□□□ -0.82
CTNNA1-244ENST00000627109 PRKRIP1Q9H875 184 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-244ENST00000627109 HNRNPMP52272 730 aaKnown RBP eCLIP9.95□□□□□ -0.822e-6■■■■■ 32.5
CTNNA1-244ENST00000627109 INO80Q9ULG1 1556 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-244ENST00000627109 ARHGAP5Q13017 1502 aa9.94□□□□□ -0.82
CTNNA1-244ENST00000627109 PLCH2O75038 1416 aa9.94□□□□□ -0.82
CTNNA1-244ENST00000627109 USP47Q96K76 1375 aa9.94□□□□□ -0.82
CTNNA1-244ENST00000627109 SPHKAPQ2M3C7 1700 aa9.94□□□□□ -0.82
CTNNA1-244ENST00000627109 ROCK2O75116 1388 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-244ENST00000627109 RAPGEF3O95398 923 aa9.94□□□□□ -0.82
CTNNA1-244ENST00000627109 IQGAP1P46940 1657 aa9.93□□□□□ -0.82
CTNNA1-244ENST00000627109 PRAG1Q86YV5 1406 aa9.93□□□□□ -0.82
CTNNA1-244ENST00000627109 ZFYVE16Q7Z3T8 1539 aa9.93□□□□□ -0.82
CTNNA1-244ENST00000627109 PKD2Q13563 968 aa9.93□□□□□ -0.82
CTNNA1-244ENST00000627109 KIAA1210Q9ULL0 1709 aa9.93□□□□□ -0.82
CTNNA1-244ENST00000627109 NUP155O75694 1391 aa9.92□□□□□ -0.82
CTNNA1-244ENST00000627109 ZMYM4Q5VZL5 1548 aa9.92□□□□□ -0.82
CTNNA1-244ENST00000627109 WDR7Q9Y4E6 1490 aa9.92□□□□□ -0.82
CTNNA1-244ENST00000627109 PLEKHG5O94827 1062 aa9.92□□□□□ -0.82
CTNNA1-244ENST00000627109 TSPY4P0CV99 314 aa9.92□□□□□ -0.82
CTNNA1-244ENST00000627109 TSPY10P0CW01 314 aa9.92□□□□□ -0.82
CTNNA1-244ENST00000627109 RTEL1-TNFRSF6BF6WH68 1400 aa9.92□□□□□ -0.82
CTNNA1-244ENST00000627109 KTN1Q86UP2 1357 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-244ENST00000627109 MLECQ14165 292 aa9.91□□□□□ -0.82
CTNNA1-244ENST00000627109 ERICH6BQ5W0A0 696 aa9.91□□□□□ -0.82
CTNNA1-244ENST00000627109 TSHZ2Q9NRE2 1034 aa9.91□□□□□ -0.82
CTNNA1-244ENST00000627109 TET3O43151 1660 aa9.91□□□□□ -0.82
CTNNA1-244ENST00000627109 CD109Q6YHK3 1445 aa9.91□□□□□ -0.82
CTNNA1-244ENST00000627109 FKBP8Q14318 412 aa9.91□□□□□ -0.82
CTNNA1-244ENST00000627109 AFAP1Q8N556 730 aa9.91□□□□□ -0.82
CTNNA1-244ENST00000627109 MADDQ8WXG6 1647 aa9.91□□□□□ -0.82
CTNNA1-244ENST00000627109 A2MP01023 1474 aa9.91□□□□□ -0.82
CTNNA1-244ENST00000627109 POLR3GLQ9BT43 218 aa9.91□□□□□ -0.82
CTNNA1-244ENST00000627109 TRPM2O94759 1503 aa9.9□□□□□ -0.82
CTNNA1-244ENST00000627109 IFT172Q9UG01 1749 aa9.9□□□□□ -0.82
CTNNA1-244ENST00000627109 ZBED9Q6R2W3 1325 aa9.9□□□□□ -0.82
CTNNA1-244ENST00000627109 MROH1Q8NDA8 1641 aa9.89□□□□□ -0.83
CTNNA1-244ENST00000627109 INSRP06213 1382 aa9.88□□□□□ -0.83
CTNNA1-244ENST00000627109 COL17A1Q9UMD9 1497 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-244ENST00000627109 CCDC184Q52MB2 194 aa9.88□□□□□ -0.83
CTNNA1-244ENST00000627109 PTPRTO14522 1441 aa9.87□□□□□ -0.83
CTNNA1-244ENST00000627109 LRPPRCP42704 1394 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-244ENST00000627109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.86□□□□□ -0.832e-7■■□□□ 13.3
CTNNA1-244ENST00000627109 SMG6Q86US8 1419 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-244ENST00000627109 RNF123Q5XPI4 1314 aa9.85□□□□□ -0.83
CTNNA1-244ENST00000627109 CCDC144AA2RUR9 1427 aa9.85□□□□□ -0.83
CTNNA1-244ENST00000627109 NPM2Q86SE8 214 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-244ENST00000627109 CLTCL1P53675 1640 aa9.85□□□□□ -0.83
CTNNA1-244ENST00000627109 MYOM1P52179 1685 aa9.84□□□□□ -0.83
CTNNA1-244ENST00000627109 ZNF326Q5BKZ1 582 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-244ENST00000627109 MYO3AQ8NEV4 1616 aa9.84□□□□□ -0.83
CTNNA1-244ENST00000627109 ESF1Q9H501 851 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-244ENST00000627109 LMTK2Q8IWU2 1503 aa9.83□□□□□ -0.84
CTNNA1-244ENST00000627109 ATP7AQ04656 1500 aa9.83□□□□□ -0.84
CTNNA1-244ENST00000627109 SCAPERQ9BY12 1400 aa9.83□□□□□ -0.84
CTNNA1-244ENST00000627109 TRAPPC8Q9Y2L5 1435 aa9.83□□□□□ -0.84
CTNNA1-244ENST00000627109 PARD3Q8TEW0 1356 aa9.83□□□□□ -0.84
CTNNA1-244ENST00000627109 SPAG9O60271 1321 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-244ENST00000627109 HNRNPUQ00839 825 aaKnown RBP eCLIP9.82□□□□□ -0.84
CTNNA1-244ENST00000627109 GGT6Q6P531 493 aa9.82□□□□□ -0.84
CTNNA1-244ENST00000627109 KIDINS220Q9ULH0 1771 aa9.82□□□□□ -0.84
CTNNA1-244ENST00000627109 CFAP74Q9C0B2 1584 aa9.82□□□□□ -0.84
CTNNA1-244ENST00000627109 BRD4O60885 1362 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms