RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 NCKAP5LQ9HCH0 1330 aa21.47■■□□□ 1.03
SOX2-OT-241ENST00000626948 KDM5DQ9BY66 1539 aa21.45■■□□□ 1.02
SOX2-OT-241ENST00000626948 MIA2Q96PC5 1412 aa21.45■■□□□ 1.02
SOX2-OT-241ENST00000626948 TCOF1Q13428 1488 aaKnown RBP21.44■■□□□ 1.02
SOX2-OT-241ENST00000626948 DNMT1P26358 1616 aaKnown RBP21.44■■□□□ 1.02
SOX2-OT-241ENST00000626948 PLA2R1Q13018 1463 aa21.43■■□□□ 1.02
SOX2-OT-241ENST00000626948 TSPY4P0CV99 314 aa21.42■■□□□ 1.02
SOX2-OT-241ENST00000626948 TSPY10P0CW01 314 aa21.42■■□□□ 1.02
SOX2-OT-241ENST00000626948 PZPP20742 1482 aa21.42■■□□□ 1.02
SOX2-OT-241ENST00000626948 MROH1Q8NDA8 1641 aa21.42■■□□□ 1.02
SOX2-OT-241ENST00000626948 RNF17Q9BXT8 1623 aaKnown RBP21.42■■□□□ 1.02
SOX2-OT-241ENST00000626948 FAM135AQ9P2D6 1515 aa21.41■■□□□ 1.02
SOX2-OT-241ENST00000626948 A2ML1A8K2U0 1454 aa21.41■■□□□ 1.02
SOX2-OT-241ENST00000626948 WASHC2CQ9Y4E1 1318 aa21.38■■□□□ 1.01
SOX2-OT-241ENST00000626948 TNRQ92752 1358 aa21.37■■□□□ 1.01
SOX2-OT-241ENST00000626948 ABCC5O15440 1437 aa21.37■■□□□ 1.01
SOX2-OT-241ENST00000626948 ABCC3O15438 1527 aa21.36■■□□□ 1.01
SOX2-OT-241ENST00000626948 CROCC2H7BZ55 1655 aa21.36■■□□□ 1.01
SOX2-OT-241ENST00000626948 PTPN23Q9H3S7 1636 aa21.36■■□□□ 1.01
SOX2-OT-241ENST00000626948 EIF2AK4Q9P2K8 1649 aaKnown RBP21.36■■□□□ 1.01
SOX2-OT-241ENST00000626948 ZNF335Q9H4Z2 1342 aaPredicted RBP21.35■■□□□ 1.01
SOX2-OT-241ENST00000626948 NEURL4Q96JN8 1562 aa21.35■■□□□ 1.01
SOX2-OT-241ENST00000626948 PKD2Q13563 968 aa21.33■■□□□ 1.01
SOX2-OT-241ENST00000626948 CEP152O94986 1710 aa21.32■■□□□ 1
SOX2-OT-241ENST00000626948 DUOX2Q9NRD8 1548 aa21.31■■□□□ 1
SOX2-OT-241ENST00000626948 ZC3H13Q5T200 1668 aaKnown RBP21.31■■□□□ 1
SOX2-OT-241ENST00000626948 FGD6Q6ZV73 1430 aa21.3■■□□□ 1
SOX2-OT-241ENST00000626948 SHANK2Q9UPX8 1470 aa21.3■■□□□ 1
SOX2-OT-241ENST00000626948 SPATA31D1Q6ZQQ2 1576 aa21.3■■□□□ 1
SOX2-OT-241ENST00000626948 DAPK1P53355 1430 aa21.29■■□□□ 1
SOX2-OT-241ENST00000626948 POLR1AO95602 1720 aaPredicted RBP21.29■■□□□ 1
SOX2-OT-241ENST00000626948 IQSEC2Q5JU85 1478 aa21.28■■□□□ 1
SOX2-OT-241ENST00000626948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.28■■□□□ 1
SOX2-OT-241ENST00000626948 KIF15Q9NS87 1388 aa21.27■■□□□ 1
SOX2-OT-241ENST00000626948 ERVK-7P63135 1459 aa21.26■□□□□ 0.99
SOX2-OT-241ENST00000626948 NLRP1Q9C000 1473 aa21.26■□□□□ 0.99
SOX2-OT-241ENST00000626948 UGGT1Q9NYU2 1555 aa21.26■□□□□ 0.99
SOX2-OT-241ENST00000626948 PRDM15P57071 1507 aaPredicted RBP21.25■□□□□ 0.99
SOX2-OT-241ENST00000626948 RRP7BPQ9NSQ0 103 aa21.25■□□□□ 0.99
SOX2-OT-241ENST00000626948 CFAP65Q6ZU64 1925 aaKnown RBP21.25■□□□□ 0.99
SOX2-OT-241ENST00000626948 ERBINQ96RT1 1412 aa21.23■□□□□ 0.99
SOX2-OT-241ENST00000626948 DEPDC5O75140 1603 aa21.23■□□□□ 0.99
SOX2-OT-241ENST00000626948 APLP2Q06481 763 aa21.23■□□□□ 0.99
SOX2-OT-241ENST00000626948 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
SOX2-OT-241ENST00000626948 MED14O60244 1454 aa21.2■□□□□ 0.98
SOX2-OT-241ENST00000626948 VWDEQ8N2E2 1590 aa21.19■□□□□ 0.98
SOX2-OT-241ENST00000626948 UBR1Q8IWV7 1749 aa21.18■□□□□ 0.98
SOX2-OT-241ENST00000626948 THEMISQ8N1K5 641 aaPredicted RBP21.18■□□□□ 0.98
SOX2-OT-241ENST00000626948 ARHGAP31Q2M1Z3 1444 aa21.18■□□□□ 0.98
SOX2-OT-241ENST00000626948 ANKLE2Q86XL3 938 aa21.16■□□□□ 0.98
SOX2-OT-241ENST00000626948 NPHP4O75161 1426 aaPredicted RBP21.15■□□□□ 0.98
SOX2-OT-241ENST00000626948 STRCP1A6NGW2 1772 aa21.15■□□□□ 0.98
SOX2-OT-241ENST00000626948 ADGRL2O95490 1459 aa21.14■□□□□ 0.98
SOX2-OT-241ENST00000626948 IQGAP1P46940 1657 aa21.14■□□□□ 0.97
SOX2-OT-241ENST00000626948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.13■□□□□ 0.97
SOX2-OT-241ENST00000626948 ANKRD30AQ9BXX3 1397 aa21.12■□□□□ 0.97
SOX2-OT-241ENST00000626948 LMTK2Q8IWU2 1503 aa21.12■□□□□ 0.97
SOX2-OT-241ENST00000626948 ARHGAP23Q9P227 1491 aa21.1■□□□□ 0.97
SOX2-OT-241ENST00000626948 UBAP1LF5GYI3 381 aa21.1■□□□□ 0.97
SOX2-OT-241ENST00000626948 PIK3C2BO00750 1634 aa21.1■□□□□ 0.97
SOX2-OT-241ENST00000626948 ALKQ9UM73 1620 aa21.1■□□□□ 0.97
SOX2-OT-241ENST00000626948 CPS1P31327 1500 aa21.09■□□□□ 0.97
SOX2-OT-241ENST00000626948 LTKP29376 864 aa21.09■□□□□ 0.97
SOX2-OT-241ENST00000626948 SYNMO15061 1565 aa21.08■□□□□ 0.97
SOX2-OT-241ENST00000626948 SLIT1O75093 1534 aa21.08■□□□□ 0.96
SOX2-OT-241ENST00000626948 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
SOX2-OT-241ENST00000626948 ILDR2Q71H61 639 aa21.05■□□□□ 0.96
SOX2-OT-241ENST00000626948 SCAF11Q99590 1463 aaKnown RBP21.05■□□□□ 0.96
SOX2-OT-241ENST00000626948 EFCAB6Q5THR3 1501 aa21.04■□□□□ 0.96
SOX2-OT-241ENST00000626948 NOS1P29475 1434 aa21.04■□□□□ 0.96
SOX2-OT-241ENST00000626948 KANK1Q14678 1352 aa21.02■□□□□ 0.96
SOX2-OT-241ENST00000626948 IDI1Q13907 227 aa21.02■□□□□ 0.96
SOX2-OT-241ENST00000626948 LRRC7Q96NW7 1537 aa21.02■□□□□ 0.96
SOX2-OT-241ENST00000626948 ANKRD50Q9ULJ7 1429 aa21.02■□□□□ 0.96
SOX2-OT-241ENST00000626948 DISP3Q9P2K9 1392 aa21.01■□□□□ 0.95
SOX2-OT-241ENST00000626948 KDM5AP29375 1690 aaKnown RBP20.99■□□□□ 0.95
SOX2-OT-241ENST00000626948 TMEM2Q9UHN6 1383 aa20.99■□□□□ 0.95
SOX2-OT-241ENST00000626948 TXNDC2Q86VQ3 553 aa20.99■□□□□ 0.95
SOX2-OT-241ENST00000626948 PPARGC1BQ86YN6 1023 aaKnown RBP20.98■□□□□ 0.95
SOX2-OT-241ENST00000626948 XIRP1Q702N8 1843 aaKnown RBP20.97■□□□□ 0.95
SOX2-OT-241ENST00000626948 UNC13BO14795 1591 aa20.96■□□□□ 0.95
SOX2-OT-241ENST00000626948 HSPA1LP34931 641 aa20.95■□□□□ 0.94
SOX2-OT-241ENST00000626948 PIP4K2BP78356 416 aa20.95■□□□□ 0.94
SOX2-OT-241ENST00000626948 TET3O43151 1660 aa20.95■□□□□ 0.94
SOX2-OT-241ENST00000626948 ADGRB3O60242 1522 aa20.94■□□□□ 0.94
SOX2-OT-241ENST00000626948 MYO5BQ9ULV0 1848 aa20.92■□□□□ 0.94
SOX2-OT-241ENST00000626948 TOM1O60784 492 aa20.92■□□□□ 0.94
SOX2-OT-241ENST00000626948 ROCK1Q13464 1354 aa20.91■□□□□ 0.94
SOX2-OT-241ENST00000626948 RPRD2Q5VT52 1461 aaKnown RBP20.91■□□□□ 0.94
SOX2-OT-241ENST00000626948 E9PCH4 1651 aa20.9■□□□□ 0.94
SOX2-OT-241ENST00000626948 GCC2Q8IWJ2 1684 aa20.9■□□□□ 0.94
SOX2-OT-241ENST00000626948 SCAF1Q9H7N4 1312 aaKnown RBP20.89■□□□□ 0.93
SOX2-OT-241ENST00000626948 EID1Q9Y6B2 187 aa20.88■□□□□ 0.93
SOX2-OT-241ENST00000626948 ZFYVE9O95405 1425 aa20.87■□□□□ 0.93
SOX2-OT-241ENST00000626948 TMEM131LA2VDJ0 1609 aa20.87■□□□□ 0.93
SOX2-OT-241ENST00000626948 IQGAP3Q86VI3 1631 aa20.87■□□□□ 0.93
SOX2-OT-241ENST00000626948 SLC52A1Q9NWF4 448 aa20.87■□□□□ 0.93
SOX2-OT-241ENST00000626948 STAG3Q9UJ98 1225 aa20.87■□□□□ 0.93
SOX2-OT-241ENST00000626948 SLC26A8Q96RN1 970 aa20.85■□□□□ 0.93
SOX2-OT-241ENST00000626948 ITGAEP38570 1179 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms