RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 TSPY10P0CW01 314 aa30.26■■■□□ 2.43
ATG4B-226ENST00000625810 KANK4Q5T7N3 995 aaPredicted RBP30.26■■■□□ 2.43
ATG4B-226ENST00000625810 NCKAP5LQ9HCH0 1330 aa30.25■■■□□ 2.43
ATG4B-226ENST00000625810 TCOF1Q13428 1488 aaKnown RBP30.23■■■□□ 2.43
ATG4B-226ENST00000625810 MAST1Q9Y2H9 1570 aa30.21■■■□□ 2.43
ATG4B-226ENST00000625810 A2ML1A8K2U0 1454 aa30.21■■■□□ 2.43
ATG4B-226ENST00000625810 APLP2Q06481 763 aa30.21■■■□□ 2.43
ATG4B-226ENST00000625810 PZPP20742 1482 aa30.2■■■□□ 2.43
ATG4B-226ENST00000625810 PKD2Q13563 968 aa30.19■■■□□ 2.42
ATG4B-226ENST00000625810 MYOM3Q5VTT5 1437 aa30.19■■■□□ 2.42
ATG4B-226ENST00000625810 DNMT1P26358 1616 aaKnown RBP30.18■■■□□ 2.42
ATG4B-226ENST00000625810 MIA2Q96PC5 1412 aa30.18■■■□□ 2.42
ATG4B-226ENST00000625810 FBXO31Q5XUX0 539 aaPredicted RBP30.17■■■□□ 2.42
ATG4B-226ENST00000625810 IQSEC2Q5JU85 1478 aa30.17■■■□□ 2.42
ATG4B-226ENST00000625810 WASHC2CQ9Y4E1 1318 aa30.17■■■□□ 2.42
ATG4B-226ENST00000625810 TNRQ92752 1358 aa30.16■■■□□ 2.42
ATG4B-226ENST00000625810 RNF17Q9BXT8 1623 aaKnown RBP30.14■■■□□ 2.42
ATG4B-226ENST00000625810 ZNF335Q9H4Z2 1342 aaPredicted RBP30.13■■■□□ 2.41
ATG4B-226ENST00000625810 EIF2AK4Q9P2K8 1649 aaKnown RBP30.09■■■□□ 2.41
ATG4B-226ENST00000625810 ABCC3O15438 1527 aa30.08■■■□□ 2.41
ATG4B-226ENST00000625810 MROH1Q8NDA8 1641 aa30.06■■■□□ 2.4
ATG4B-226ENST00000625810 ZC3H13Q5T200 1668 aaKnown RBP30.05■■■□□ 2.4
ATG4B-226ENST00000625810 NEURL4Q96JN8 1562 aa30.04■■■□□ 2.4
ATG4B-226ENST00000625810 POLR1AO95602 1720 aaPredicted RBP30.04■■■□□ 2.4
ATG4B-226ENST00000625810 NLRP1Q9C000 1473 aa30.04■■■□□ 2.4
ATG4B-226ENST00000625810 DUOX2Q9NRD8 1548 aa30.01■■■□□ 2.4
ATG4B-226ENST00000625810 PTPN23Q9H3S7 1636 aa30■■■□□ 2.39
ATG4B-226ENST00000625810 CROCC2H7BZ55 1655 aa30■■■□□ 2.39
ATG4B-226ENST00000625810 SHANK2Q9UPX8 1470 aa29.99■■■□□ 2.39
ATG4B-226ENST00000625810 SPATA31D1Q6ZQQ2 1576 aa29.99■■■□□ 2.39
ATG4B-226ENST00000625810 ABCC5O15440 1437 aa29.99■■■□□ 2.39
ATG4B-226ENST00000625810 UGGT1Q9NYU2 1555 aa29.98■■■□□ 2.39
ATG4B-226ENST00000625810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.98■■■□□ 2.39
ATG4B-226ENST00000625810 ERVK-7P63135 1459 aa29.95■■■□□ 2.39
ATG4B-226ENST00000625810 KIF15Q9NS87 1388 aa29.95■■■□□ 2.39
ATG4B-226ENST00000625810 CEP152O94986 1710 aa29.95■■■□□ 2.38
ATG4B-226ENST00000625810 THEMISQ8N1K5 641 aaPredicted RBP29.94■■■□□ 2.38
ATG4B-226ENST00000625810 FGD6Q6ZV73 1430 aa29.93■■■□□ 2.38
ATG4B-226ENST00000625810 DAPK1P53355 1430 aa29.92■■■□□ 2.38
ATG4B-226ENST00000625810 ANKLE2Q86XL3 938 aa29.92■■■□□ 2.38
ATG4B-226ENST00000625810 PRDM15P57071 1507 aaPredicted RBP29.91■■■□□ 2.38
ATG4B-226ENST00000625810 ERBINQ96RT1 1412 aa29.91■■■□□ 2.38
ATG4B-226ENST00000625810 DEPDC5O75140 1603 aa29.9■■■□□ 2.38
ATG4B-226ENST00000625810 MED14O60244 1454 aa29.89■■■□□ 2.38
ATG4B-226ENST00000625810 UBAP1LF5GYI3 381 aa29.89■■■□□ 2.38
ATG4B-226ENST00000625810 RRP7BPQ9NSQ0 103 aa29.88■■■□□ 2.37
ATG4B-226ENST00000625810 CPS1P31327 1500 aa29.86■■■□□ 2.37
ATG4B-226ENST00000625810 NPHP4O75161 1426 aaPredicted RBP29.86■■■□□ 2.37
ATG4B-226ENST00000625810 VWDEQ8N2E2 1590 aa29.86■■■□□ 2.37
ATG4B-226ENST00000625810 DISP3Q9P2K9 1392 aa29.85■■■□□ 2.37
ATG4B-226ENST00000625810 ARHGAP31Q2M1Z3 1444 aa29.82■■■□□ 2.36
ATG4B-226ENST00000625810 IQGAP1P46940 1657 aa29.82■■■□□ 2.36
ATG4B-226ENST00000625810 UBR1Q8IWV7 1749 aa29.8■■■□□ 2.36
ATG4B-226ENST00000625810 CHIC2Q9UKJ5 165 aa29.8■■■□□ 2.36
ATG4B-226ENST00000625810 CFAP65Q6ZU64 1925 aaKnown RBP29.79■■■□□ 2.36
ATG4B-226ENST00000625810 ANKRD30AQ9BXX3 1397 aa29.77■■■□□ 2.36
ATG4B-226ENST00000625810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.77■■■□□ 2.367e-14■■□□□ 11.6
ATG4B-226ENST00000625810 FAM50AQ14320 339 aaKnown RBP29.73■■■□□ 2.35
ATG4B-226ENST00000625810 KANK1Q14678 1352 aa29.72■■■□□ 2.35
ATG4B-226ENST00000625810 LMTK2Q8IWU2 1503 aa29.71■■■□□ 2.35
ATG4B-226ENST00000625810 ILDR2Q71H61 639 aa29.71■■■□□ 2.35
ATG4B-226ENST00000625810 ADGRL2O95490 1459 aa29.71■■■□□ 2.35
ATG4B-226ENST00000625810 SCAF11Q99590 1463 aaKnown RBP29.71■■■□□ 2.35
ATG4B-226ENST00000625810 ARHGAP23Q9P227 1491 aa29.71■■■□□ 2.35
ATG4B-226ENST00000625810 SLIT1O75093 1534 aa29.7■■■□□ 2.34
ATG4B-226ENST00000625810 STRCP1A6NGW2 1772 aa29.69■■■□□ 2.34
ATG4B-226ENST00000625810 PIK3C2BO00750 1634 aa29.67■■■□□ 2.34
ATG4B-226ENST00000625810 TOM1O60784 492 aa29.65■■■□□ 2.34
ATG4B-226ENST00000625810 LTKP29376 864 aa29.65■■■□□ 2.34
ATG4B-226ENST00000625810 ALKQ9UM73 1620 aa29.64■■■□□ 2.34
ATG4B-226ENST00000625810 PIP4K2BP78356 416 aa29.64■■■□□ 2.34
ATG4B-226ENST00000625810 EFCAB6Q5THR3 1501 aa29.63■■■□□ 2.33
ATG4B-226ENST00000625810 SYNMO15061 1565 aa29.63■■■□□ 2.33
ATG4B-226ENST00000625810 SCAF1Q9H7N4 1312 aaKnown RBP29.63■■■□□ 2.33
ATG4B-226ENST00000625810 LRRC7Q96NW7 1537 aa29.62■■■□□ 2.33
ATG4B-226ENST00000625810 TXNDC2Q86VQ3 553 aa29.61■■■□□ 2.33
ATG4B-226ENST00000625810 HSPA1LP34931 641 aa29.59■■■□□ 2.33
ATG4B-226ENST00000625810 TMEM2Q9UHN6 1383 aa29.59■■■□□ 2.33
ATG4B-226ENST00000625810 KDM5AP29375 1690 aaKnown RBP29.59■■■□□ 2.33
ATG4B-226ENST00000625810 NOS1P29475 1434 aa29.58■■■□□ 2.33
ATG4B-226ENST00000625810 ANKRD50Q9ULJ7 1429 aa29.57■■■□□ 2.32
ATG4B-226ENST00000625810 IDI1Q13907 227 aa29.56■■■□□ 2.32
ATG4B-226ENST00000625810 EID1Q9Y6B2 187 aa29.56■■■□□ 2.32
ATG4B-226ENST00000625810 STAG3Q9UJ98 1225 aa29.55■■■□□ 2.32
ATG4B-226ENST00000625810 ADGRB3O60242 1522 aa29.51■■■□□ 2.32
ATG4B-226ENST00000625810 SOCS7O14512 581 aa29.5■■■□□ 2.31
ATG4B-226ENST00000625810 RPRD2Q5VT52 1461 aaKnown RBP29.49■■■□□ 2.31
ATG4B-226ENST00000625810 TET3O43151 1660 aa29.47■■■□□ 2.31
ATG4B-226ENST00000625810 PPARGC1BQ86YN6 1023 aaKnown RBP29.46■■■□□ 2.31
ATG4B-226ENST00000625810 UNC13BO14795 1591 aa29.46■■■□□ 2.31
ATG4B-226ENST00000625810 MED1Q15648 1581 aaPredicted RBP29.45■■■□□ 2.31
ATG4B-226ENST00000625810 XIRP1Q702N8 1843 aaKnown RBP29.44■■■□□ 2.3
ATG4B-226ENST00000625810 SLC52A1Q9NWF4 448 aa29.44■■■□□ 2.3
ATG4B-226ENST00000625810 ROCK1Q13464 1354 aa29.41■■■□□ 2.3
ATG4B-226ENST00000625810 GCC2Q8IWJ2 1684 aa29.4■■■□□ 2.3
ATG4B-226ENST00000625810 ITGAEP38570 1179 aa29.4■■■□□ 2.3
ATG4B-226ENST00000625810 SLC26A8Q96RN1 970 aa29.37■■■□□ 2.29
ATG4B-226ENST00000625810 ZFYVE9O95405 1425 aa29.36■■■□□ 2.29
ATG4B-226ENST00000625810 KCNA6P17658 529 aa29.34■■■□□ 2.29
ATG4B-226ENST00000625810 TMEM131LA2VDJ0 1609 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms