RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 NCOA1Q15788 1441 aa31.11■■■□□ 2.57
R3HCC1-210ENST00000625275 KIF3BO15066 747 aa31.09■■■□□ 2.57
R3HCC1-210ENST00000625275 RNF17Q9BXT8 1623 aaKnown RBP31.09■■■□□ 2.57
R3HCC1-210ENST00000625275 EIF2AK4Q9P2K8 1649 aaKnown RBP31.08■■■□□ 2.57
R3HCC1-210ENST00000625275 PTPRTO14522 1441 aa31.08■■■□□ 2.57
R3HCC1-210ENST00000625275 APLP2Q06481 763 aa31.07■■■□□ 2.56
R3HCC1-210ENST00000625275 PTPN23Q9H3S7 1636 aa31.06■■■□□ 2.56
R3HCC1-210ENST00000625275 CERKQ8TCT0 537 aa31.03■■■□□ 2.56
R3HCC1-210ENST00000625275 ZC3H13Q5T200 1668 aaKnown RBP31.03■■■□□ 2.56
R3HCC1-210ENST00000625275 PZPP20742 1482 aa31.01■■■□□ 2.55
R3HCC1-210ENST00000625275 PLA2R1Q13018 1463 aa30.99■■■□□ 2.55
R3HCC1-210ENST00000625275 SHANK2Q9UPX8 1470 aa30.97■■■□□ 2.55
R3HCC1-210ENST00000625275 DNMT1P26358 1616 aaKnown RBP30.97■■■□□ 2.55
R3HCC1-210ENST00000625275 A2ML1A8K2U0 1454 aa30.96■■■□□ 2.55
R3HCC1-210ENST00000625275 MROH1Q8NDA8 1641 aa30.95■■■□□ 2.55
R3HCC1-210ENST00000625275 DUOX2Q9NRD8 1548 aa30.95■■■□□ 2.55
R3HCC1-210ENST00000625275 WASHC2CQ9Y4E1 1318 aa30.95■■■□□ 2.55
R3HCC1-210ENST00000625275 CEP152O94986 1710 aa30.95■■■□□ 2.54
R3HCC1-210ENST00000625275 POLR1AO95602 1720 aaPredicted RBP30.94■■■□□ 2.54
R3HCC1-210ENST00000625275 FGD6Q6ZV73 1430 aa30.93■■■□□ 2.54
R3HCC1-210ENST00000625275 ABCC3O15438 1527 aa30.92■■■□□ 2.54
R3HCC1-210ENST00000625275 TCOF1Q13428 1488 aaKnown RBP30.92■■■□□ 2.54
R3HCC1-210ENST00000625275 TNRQ92752 1358 aa30.92■■■□□ 2.54
R3HCC1-210ENST00000625275 LTBP4Q8N2S1 1624 aa30.91■■■□□ 2.54
R3HCC1-210ENST00000625275 ABCC5O15440 1437 aa30.91■■■□□ 2.54
R3HCC1-210ENST00000625275 CFAP65Q6ZU64 1925 aaKnown RBP30.91■■■□□ 2.54
R3HCC1-210ENST00000625275 FBXO31Q5XUX0 539 aaPredicted RBP30.88■■■□□ 2.53
R3HCC1-210ENST00000625275 DAPK1P53355 1430 aa30.87■■■□□ 2.53
R3HCC1-210ENST00000625275 NCKAP5LQ9HCH0 1330 aa30.86■■■□□ 2.53
R3HCC1-210ENST00000625275 KIF15Q9NS87 1388 aa30.85■■■□□ 2.53
R3HCC1-210ENST00000625275 PKD2Q13563 968 aa30.84■■■□□ 2.53
R3HCC1-210ENST00000625275 PRDM15P57071 1507 aaPredicted RBP30.84■■■□□ 2.53
R3HCC1-210ENST00000625275 ERBINQ96RT1 1412 aa30.83■■■□□ 2.53
R3HCC1-210ENST00000625275 DEPDC5O75140 1603 aa30.83■■■□□ 2.53
R3HCC1-210ENST00000625275 SPATA31D1Q6ZQQ2 1576 aa30.82■■■□□ 2.53
R3HCC1-210ENST00000625275 NLRP1Q9C000 1473 aa30.82■■■□□ 2.52
R3HCC1-210ENST00000625275 NEURL4Q96JN8 1562 aa30.78■■■□□ 2.52
R3HCC1-210ENST00000625275 IQSEC2Q5JU85 1478 aa30.78■■■□□ 2.52
R3HCC1-210ENST00000625275 UGGT1Q9NYU2 1555 aa30.77■■■□□ 2.52
R3HCC1-210ENST00000625275 ERVK-7P63135 1459 aa30.76■■■□□ 2.52
R3HCC1-210ENST00000625275 PPARGC1BQ86YN6 1023 aaKnown RBP30.75■■■□□ 2.51
R3HCC1-210ENST00000625275 RRP7BPQ9NSQ0 103 aa30.74■■■□□ 2.51
R3HCC1-210ENST00000625275 ANKRD30AQ9BXX3 1397 aa30.71■■■□□ 2.51
R3HCC1-210ENST00000625275 ZNF335Q9H4Z2 1342 aaPredicted RBP30.7■■■□□ 2.51
R3HCC1-210ENST00000625275 UBR1Q8IWV7 1749 aa30.69■■■□□ 2.5
R3HCC1-210ENST00000625275 ADGRL2O95490 1459 aa30.68■■■□□ 2.5
R3HCC1-210ENST00000625275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.68■■■□□ 2.5
R3HCC1-210ENST00000625275 THEMISQ8N1K5 641 aaPredicted RBP30.66■■■□□ 2.5
R3HCC1-210ENST00000625275 ARHGAP31Q2M1Z3 1444 aa30.66■■■□□ 2.5
R3HCC1-210ENST00000625275 CHIC2Q9UKJ5 165 aa30.65■■■□□ 2.5
R3HCC1-210ENST00000625275 IQGAP1P46940 1657 aa30.64■■■□□ 2.5
R3HCC1-210ENST00000625275 VWDEQ8N2E2 1590 aa30.64■■■□□ 2.49
R3HCC1-210ENST00000625275 KANK1Q14678 1352 aa30.62■■■□□ 2.49
R3HCC1-210ENST00000625275 FAM50AQ14320 339 aaKnown RBP30.61■■■□□ 2.49
R3HCC1-210ENST00000625275 ANKLE2Q86XL3 938 aa30.61■■■□□ 2.49
R3HCC1-210ENST00000625275 MED14O60244 1454 aa30.61■■■□□ 2.49
R3HCC1-210ENST00000625275 LMTK2Q8IWU2 1503 aa30.6■■■□□ 2.49
R3HCC1-210ENST00000625275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.59■■■□□ 2.49
R3HCC1-210ENST00000625275 NPHP4O75161 1426 aaPredicted RBP30.57■■■□□ 2.48
R3HCC1-210ENST00000625275 PIK3C2BO00750 1634 aa30.56■■■□□ 2.48
R3HCC1-210ENST00000625275 CPS1P31327 1500 aa30.55■■■□□ 2.48
R3HCC1-210ENST00000625275 EFCAB6Q5THR3 1501 aa30.54■■■□□ 2.48
R3HCC1-210ENST00000625275 KDM5AP29375 1690 aaKnown RBP30.53■■■□□ 2.48
R3HCC1-210ENST00000625275 ANKRD50Q9ULJ7 1429 aa30.5■■■□□ 2.47
R3HCC1-210ENST00000625275 SLIT1O75093 1534 aa30.49■■■□□ 2.47
R3HCC1-210ENST00000625275 SYNMO15061 1565 aa30.49■■■□□ 2.47
R3HCC1-210ENST00000625275 STRCP1A6NGW2 1772 aa30.48■■■□□ 2.47
R3HCC1-210ENST00000625275 TET3O43151 1660 aa30.47■■■□□ 2.47
R3HCC1-210ENST00000625275 SCAF11Q99590 1463 aaKnown RBP30.47■■■□□ 2.47
R3HCC1-210ENST00000625275 ARHGAP23Q9P227 1491 aa30.47■■■□□ 2.47
R3HCC1-210ENST00000625275 UNC13BO14795 1591 aa30.47■■■□□ 2.47
R3HCC1-210ENST00000625275 GCC2Q8IWJ2 1684 aa30.46■■■□□ 2.47
R3HCC1-210ENST00000625275 UBAP1LF5GYI3 381 aa30.42■■■□□ 2.46
R3HCC1-210ENST00000625275 NOS1P29475 1434 aa30.41■■■□□ 2.46
R3HCC1-210ENST00000625275 RPRD2Q5VT52 1461 aaKnown RBP30.4■■■□□ 2.46
R3HCC1-210ENST00000625275 ROCK1Q13464 1354 aa30.39■■■□□ 2.45
R3HCC1-210ENST00000625275 MYO5BQ9ULV0 1848 aa30.38■■■□□ 2.45
R3HCC1-210ENST00000625275 ADGRB3O60242 1522 aa30.38■■■□□ 2.45
R3HCC1-210ENST00000625275 IQGAP3Q86VI3 1631 aa30.34■■■□□ 2.45
R3HCC1-210ENST00000625275 TMEM2Q9UHN6 1383 aa30.34■■■□□ 2.45
R3HCC1-210ENST00000625275 RRBP1Q9P2E9 1410 aaKnown RBP30.33■■■□□ 2.45
R3HCC1-210ENST00000625275 E9PCH4 1651 aa30.33■■■□□ 2.45
R3HCC1-210ENST00000625275 LTKP29376 864 aa30.33■■■□□ 2.45
R3HCC1-210ENST00000625275 TXNDC2Q86VQ3 553 aa30.32■■■□□ 2.44
R3HCC1-210ENST00000625275 STAG3Q9UJ98 1225 aa30.32■■■□□ 2.44
R3HCC1-210ENST00000625275 IDI1Q13907 227 aa30.31■■■□□ 2.44
R3HCC1-210ENST00000625275 EID1Q9Y6B2 187 aa30.31■■■□□ 2.44
R3HCC1-210ENST00000625275 LRRC7Q96NW7 1537 aa30.28■■■□□ 2.44
R3HCC1-210ENST00000625275 XIRP1Q702N8 1843 aaKnown RBP30.28■■■□□ 2.44
R3HCC1-210ENST00000625275 ALKQ9UM73 1620 aa30.26■■■□□ 2.43
R3HCC1-210ENST00000625275 SLC52A1Q9NWF4 448 aa30.25■■■□□ 2.43
R3HCC1-210ENST00000625275 TOM1O60784 492 aa30.24■■■□□ 2.43
R3HCC1-210ENST00000625275 TMEM131LA2VDJ0 1609 aa30.23■■■□□ 2.43
R3HCC1-210ENST00000625275 ITGAEP38570 1179 aa30.23■■■□□ 2.43
R3HCC1-210ENST00000625275 DISP3Q9P2K9 1392 aa30.22■■■□□ 2.43
R3HCC1-210ENST00000625275 SCAF1Q9H7N4 1312 aaKnown RBP30.19■■■□□ 2.42
R3HCC1-210ENST00000625275 PIP4K2BP78356 416 aa30.18■■■□□ 2.42
R3HCC1-210ENST00000625275 SPHKAPQ2M3C7 1700 aa30.14■■■□□ 2.42
R3HCC1-210ENST00000625275 ZFYVE9O95405 1425 aa30.14■■■□□ 2.42
R3HCC1-210ENST00000625275 NUP155O75694 1391 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms