RNA–Protein interactions for RNA: ENST00000624909.1

PCDHB9-203, Transcript of protocadherin beta 9, humanhuman

TSL 3

Gene PCDHB9, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-203ENST00000624909 AFAP1Q8N556 730 aa12.39□□□□□ -0.43
PCDHB9-203ENST00000624909 SPOCK2Q92563 424 aa12.39□□□□□ -0.43
PCDHB9-203ENST00000624909 TCOF1Q13428 1488 aaKnown RBP12.39□□□□□ -0.43
PCDHB9-203ENST00000624909 ARHGEF5Q12774 1597 aa12.39□□□□□ -0.43
PCDHB9-203ENST00000624909 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCDHB9-203ENST00000624909 CCDC141Q6ZP82 1450 aa12.38□□□□□ -0.43
PCDHB9-203ENST00000624909 SPAG9O60271 1321 aaKnown RBP12.37□□□□□ -0.43
PCDHB9-203ENST00000624909 ZNF644Q9H582 1327 aaPredicted RBP12.37□□□□□ -0.43
PCDHB9-203ENST00000624909 TRAPPC8Q9Y2L5 1435 aa12.37□□□□□ -0.43
PCDHB9-203ENST00000624909 SYCP2Q9BX26 1530 aa12.37□□□□□ -0.43
PCDHB9-203ENST00000624909 ARHGEF12Q9NZN5 1544 aa12.37□□□□□ -0.43
PCDHB9-203ENST00000624909 ZBTB47Q9UFB7 747 aaPredicted RBP12.37□□□□□ -0.43
PCDHB9-203ENST00000624909 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
PCDHB9-203ENST00000624909 FRMPD1Q5SYB0 1578 aa12.37□□□□□ -0.43
PCDHB9-203ENST00000624909 PTPN23Q9H3S7 1636 aa12.35□□□□□ -0.43
PCDHB9-203ENST00000624909 ZFYVE16Q7Z3T8 1539 aa12.35□□□□□ -0.43
PCDHB9-203ENST00000624909 HECW2Q9P2P5 1572 aa12.35□□□□□ -0.43
PCDHB9-203ENST00000624909 ATP10AO60312 1499 aa12.34□□□□□ -0.43
PCDHB9-203ENST00000624909 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
PCDHB9-203ENST00000624909 ARHGEF40Q8TER5 1519 aa12.33□□□□□ -0.44
PCDHB9-203ENST00000624909 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
PCDHB9-203ENST00000624909 RRBP1Q9P2E9 1410 aaKnown RBP12.33□□□□□ -0.44
PCDHB9-203ENST00000624909 REREQ9P2R6 1566 aa12.33□□□□□ -0.44
PCDHB9-203ENST00000624909 PRR29P0C7W0 189 aa12.32□□□□□ -0.44
PCDHB9-203ENST00000624909 C9orf84Q5VXU9 1444 aa12.31□□□□□ -0.44
PCDHB9-203ENST00000624909 ATP7AQ04656 1500 aa12.31□□□□□ -0.44
PCDHB9-203ENST00000624909 MAST1Q9Y2H9 1570 aa12.3□□□□□ -0.44
PCDHB9-203ENST00000624909 FAM50AQ14320 339 aaKnown RBP12.3□□□□□ -0.44
PCDHB9-203ENST00000624909 INO80Q9ULG1 1556 aaPredicted RBP12.3□□□□□ -0.44
PCDHB9-203ENST00000624909 ABCC5O15440 1437 aa12.29□□□□□ -0.44
PCDHB9-203ENST00000624909 DAPK1P53355 1430 aa12.29□□□□□ -0.44
PCDHB9-203ENST00000624909 YEATS2Q9ULM3 1422 aa12.29□□□□□ -0.44
PCDHB9-203ENST00000624909 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
PCDHB9-203ENST00000624909 KIDINS220Q9ULH0 1771 aa12.28□□□□□ -0.44
PCDHB9-203ENST00000624909 AGLP35573 1532 aa12.28□□□□□ -0.44
PCDHB9-203ENST00000624909 PPARGC1BQ86YN6 1023 aaKnown RBP12.28□□□□□ -0.44
PCDHB9-203ENST00000624909 DHX29Q7Z478 1369 aaKnown RBP12.28□□□□□ -0.44
PCDHB9-203ENST00000624909 ANKRD30AQ9BXX3 1397 aa12.28□□□□□ -0.44
PCDHB9-203ENST00000624909 ROCK1Q13464 1354 aa12.27□□□□□ -0.45
PCDHB9-203ENST00000624909 A2MP01023 1474 aa12.27□□□□□ -0.45
PCDHB9-203ENST00000624909 DIP2CQ9Y2E4 1556 aa12.26□□□□□ -0.45
PCDHB9-203ENST00000624909 PITPNM1O00562 1244 aa12.26□□□□□ -0.45
PCDHB9-203ENST00000624909 PLXNC1O60486 1568 aa12.26□□□□□ -0.45
PCDHB9-203ENST00000624909 ADGBQ8N7X0 1667 aa12.26□□□□□ -0.45
PCDHB9-203ENST00000624909 ARID4BQ4LE39 1312 aaPredicted RBP12.25□□□□□ -0.45
PCDHB9-203ENST00000624909 ADGRL2O95490 1459 aa12.25□□□□□ -0.45
PCDHB9-203ENST00000624909 NCOA1Q15788 1441 aa12.24□□□□□ -0.45
PCDHB9-203ENST00000624909 ABCA6Q8N139 1617 aa12.24□□□□□ -0.45
PCDHB9-203ENST00000624909 ACIN1Q9UKV3 1341 aaKnown RBP12.24□□□□□ -0.45
PCDHB9-203ENST00000624909 CROCC2H7BZ55 1655 aa12.23□□□□□ -0.45
PCDHB9-203ENST00000624909 DUOX2Q9NRD8 1548 aa12.23□□□□□ -0.45
PCDHB9-203ENST00000624909 PKD2Q13563 968 aa12.23□□□□□ -0.45
PCDHB9-203ENST00000624909 ERBINQ96RT1 1412 aa12.22□□□□□ -0.45
PCDHB9-203ENST00000624909 KIF15Q9NS87 1388 aa12.22□□□□□ -0.45
PCDHB9-203ENST00000624909 FAM135AQ9P2D6 1515 aa12.21□□□□□ -0.45
PCDHB9-203ENST00000624909 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
PCDHB9-203ENST00000624909 BCORL1Q5H9F3 1711 aa12.2□□□□□ -0.46
PCDHB9-203ENST00000624909 CNTLNQ9NXG0 1405 aa12.2□□□□□ -0.46
PCDHB9-203ENST00000624909 ESF1Q9H501 851 aaKnown RBP12.19□□□□□ -0.46
PCDHB9-203ENST00000624909 RRP7BPQ9NSQ0 103 aa12.19□□□□□ -0.46
PCDHB9-203ENST00000624909 EIF2AK4Q9P2K8 1649 aaKnown RBP12.19□□□□□ -0.46
PCDHB9-203ENST00000624909 CHIC2Q9UKJ5 165 aa12.18□□□□□ -0.46
PCDHB9-203ENST00000624909 KIF3BO15066 747 aa12.17□□□□□ -0.46
PCDHB9-203ENST00000624909 PTPRKQ15262 1439 aa12.17□□□□□ -0.46
PCDHB9-203ENST00000624909 KDM4FA0A1W2PPD8 638 aa12.16□□□□□ -0.46
PCDHB9-203ENST00000624909 ANKRD50Q9ULJ7 1429 aa12.16□□□□□ -0.46
PCDHB9-203ENST00000624909 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
PCDHB9-203ENST00000624909 HFM1A2PYH4 1435 aa12.14□□□□□ -0.47
PCDHB9-203ENST00000624909 ECM2O94769 699 aaPredicted RBP12.14□□□□□ -0.47
PCDHB9-203ENST00000624909 ITGAEP38570 1179 aa12.14□□□□□ -0.47
PCDHB9-203ENST00000624909 GGT6Q6P531 493 aa12.14□□□□□ -0.47
PCDHB9-203ENST00000624909 KANK1Q14678 1352 aa12.14□□□□□ -0.47
PCDHB9-203ENST00000624909 RNF17Q9BXT8 1623 aaKnown RBP12.13□□□□□ -0.47
PCDHB9-203ENST00000624909 CIZ1Q9ULV3 898 aaPredicted RBP12.13□□□□□ -0.47
PCDHB9-203ENST00000624909 WASHC2CQ9Y4E1 1318 aa12.12□□□□□ -0.47
PCDHB9-203ENST00000624909 MLECQ14165 292 aa12.12□□□□□ -0.47
PCDHB9-203ENST00000624909 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
PCDHB9-203ENST00000624909 HRCP23327 699 aa12.11□□□□□ -0.47
PCDHB9-203ENST00000624909 SIGLEC1Q9BZZ2 1709 aa12.11□□□□□ -0.47
PCDHB9-203ENST00000624909 NAIPQ13075 1403 aa12.11□□□□□ -0.47
PCDHB9-203ENST00000624909 PTPRMP28827 1452 aa12.1□□□□□ -0.47
PCDHB9-203ENST00000624909 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
PCDHB9-203ENST00000624909 PRDM15P57071 1507 aaPredicted RBP12.1□□□□□ -0.47
PCDHB9-203ENST00000624909 DEPDC5O75140 1603 aa12.09□□□□□ -0.47
PCDHB9-203ENST00000624909 NUBP1P53384 320 aa12.09□□□□□ -0.47
PCDHB9-203ENST00000624909 GSE1Q14687 1217 aa12.09□□□□□ -0.47
PCDHB9-203ENST00000624909 MROH2AA6NES4 1674 aa12.09□□□□□ -0.47
PCDHB9-203ENST00000624909 ZC3H13Q5T200 1668 aaKnown RBP12.09□□□□□ -0.47
PCDHB9-203ENST00000624909 MADDQ8WXG6 1647 aa12.08□□□□□ -0.48
PCDHB9-203ENST00000624909 ZMYM3Q14202 1370 aa12.08□□□□□ -0.48
PCDHB9-203ENST00000624909 FER1L4A9Z1Z3 1794 aa12.08□□□□□ -0.48
PCDHB9-203ENST00000624909 NPATQ14207 1427 aa12.08□□□□□ -0.48
PCDHB9-203ENST00000624909 LMTK2Q8IWU2 1503 aa12.07□□□□□ -0.48
PCDHB9-203ENST00000624909 TRIM26Q12899 539 aaPredicted RBP12.07□□□□□ -0.48
PCDHB9-203ENST00000624909 ARHGAP31Q2M1Z3 1444 aa12.07□□□□□ -0.48
PCDHB9-203ENST00000624909 VWDEQ8N2E2 1590 aa12.05□□□□□ -0.48
PCDHB9-203ENST00000624909 SETD5Q9C0A6 1442 aa12.05□□□□□ -0.48
PCDHB9-203ENST00000624909 GCC2Q8IWJ2 1684 aa12.05□□□□□ -0.48
PCDHB9-203ENST00000624909 ABCC3O15438 1527 aa12.05□□□□□ -0.48
PCDHB9-203ENST00000624909 MROH1Q8NDA8 1641 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms