RNA–Protein interactions for RNA: ENST00000624390.1

LINC00963-219, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 472 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-219ENST00000624390 PTPRKQ15262 1439 aa12.68□□□□□ -0.38
LINC00963-219ENST00000624390 FBXO31Q5XUX0 539 aaPredicted RBP12.67□□□□□ -0.38
LINC00963-219ENST00000624390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC00963-219ENST00000624390 ERBINQ96RT1 1412 aa12.65□□□□□ -0.38
LINC00963-219ENST00000624390 SENP3Q9H4L4 574 aaPredicted RBP12.65□□□□□ -0.38
LINC00963-219ENST00000624390 KANK1Q14678 1352 aa12.65□□□□□ -0.38
LINC00963-219ENST00000624390 RRBP1Q9P2E9 1410 aaKnown RBP12.64□□□□□ -0.39
LINC00963-219ENST00000624390 UHRF1BP1Q6BDS2 1440 aa12.63□□□□□ -0.39
LINC00963-219ENST00000624390 ANKRD50Q9ULJ7 1429 aa12.63□□□□□ -0.39
LINC00963-219ENST00000624390 ROCK1Q13464 1354 aa12.63□□□□□ -0.39
LINC00963-219ENST00000624390 ADGRL2O95490 1459 aa12.63□□□□□ -0.39
LINC00963-219ENST00000624390 LMTK3Q96Q04 1460 aa12.62□□□□□ -0.39
LINC00963-219ENST00000624390 CROCC2H7BZ55 1655 aa12.61□□□□□ -0.39
LINC00963-219ENST00000624390 CLTCQ00610 1675 aaKnown RBP12.61□□□□□ -0.39
LINC00963-219ENST00000624390 KDM5DQ9BY66 1539 aa12.61□□□□□ -0.39
LINC00963-219ENST00000624390 NPATQ14207 1427 aa12.61□□□□□ -0.39
LINC00963-219ENST00000624390 TNRQ92752 1358 aa12.59□□□□□ -0.39
LINC00963-219ENST00000624390 C3P01024 1663 aa12.59□□□□□ -0.39
LINC00963-219ENST00000624390 EIF2AK4Q9P2K8 1649 aaKnown RBP12.58□□□□□ -0.4
LINC00963-219ENST00000624390 ABCC3O15438 1527 aa12.57□□□□□ -0.4
LINC00963-219ENST00000624390 PZPP20742 1482 aa12.57□□□□□ -0.4
LINC00963-219ENST00000624390 NUP155O75694 1391 aa12.56□□□□□ -0.4
LINC00963-219ENST00000624390 RNF17Q9BXT8 1623 aaKnown RBP12.56□□□□□ -0.4
LINC00963-219ENST00000624390 TRIM52Q96A61 297 aa12.56□□□□□ -0.4
LINC00963-219ENST00000624390 FAM135AQ9P2D6 1515 aa12.56□□□□□ -0.4
LINC00963-219ENST00000624390 MROH2AA6NES4 1674 aa12.55□□□□□ -0.4
LINC00963-219ENST00000624390 DMRT2Q9Y5R5 561 aa12.55□□□□□ -0.4
LINC00963-219ENST00000624390 THEMISQ8N1K5 641 aaPredicted RBP12.54□□□□□ -0.4
LINC00963-219ENST00000624390 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
LINC00963-219ENST00000624390 NCKAP5LQ9HCH0 1330 aa12.54□□□□□ -0.4
LINC00963-219ENST00000624390 MROH1Q8NDA8 1641 aa12.54□□□□□ -0.4
LINC00963-219ENST00000624390 PRDM15P57071 1507 aaPredicted RBP12.52□□□□□ -0.4
LINC00963-219ENST00000624390 SETD1BQ9UPS6 1966 aaKnown RBP12.52□□□□□ -0.4
LINC00963-219ENST00000624390 PREX1Q8TCU6 1659 aa12.52□□□□□ -0.4
LINC00963-219ENST00000624390 NAIPQ13075 1403 aa12.52□□□□□ -0.41
LINC00963-219ENST00000624390 ARHGAP31Q2M1Z3 1444 aa12.52□□□□□ -0.41
LINC00963-219ENST00000624390 PHF23Q9BUL5 403 aaPredicted RBP12.51□□□□□ -0.41
LINC00963-219ENST00000624390 A2ML1A8K2U0 1454 aa12.51□□□□□ -0.41
LINC00963-219ENST00000624390 ERVK-7P63135 1459 aa12.51□□□□□ -0.41
LINC00963-219ENST00000624390 PKD2Q13563 968 aa12.5□□□□□ -0.41
LINC00963-219ENST00000624390 IDI1Q13907 227 aa12.5□□□□□ -0.41
LINC00963-219ENST00000624390 ANKLE2Q86XL3 938 aa12.5□□□□□ -0.41
LINC00963-219ENST00000624390 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
LINC00963-219ENST00000624390 ZC3H13Q5T200 1668 aaKnown RBP12.48□□□□□ -0.41
LINC00963-219ENST00000624390 LMTK2Q8IWU2 1503 aa12.48□□□□□ -0.41
LINC00963-219ENST00000624390 NLRP1Q9C000 1473 aa12.48□□□□□ -0.41
LINC00963-219ENST00000624390 HFM1A2PYH4 1435 aa12.48□□□□□ -0.41
LINC00963-219ENST00000624390 SLC52A1Q9NWF4 448 aa12.48□□□□□ -0.41
LINC00963-219ENST00000624390 CEP152O94986 1710 aa12.48□□□□□ -0.41
LINC00963-219ENST00000624390 DEPDC5O75140 1603 aa12.48□□□□□ -0.41
LINC00963-219ENST00000624390 CAMSAP1Q5T5Y3 1602 aa12.48□□□□□ -0.41
LINC00963-219ENST00000624390 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
LINC00963-219ENST00000624390 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
LINC00963-219ENST00000624390 CEP170BQ9Y4F5 1589 aaPredicted RBP12.47□□□□□ -0.41
LINC00963-219ENST00000624390 MYO3AQ8NEV4 1616 aa12.46□□□□□ -0.41
LINC00963-219ENST00000624390 SPATA31D1Q6ZQQ2 1576 aa12.46□□□□□ -0.42
LINC00963-219ENST00000624390 UGGT1Q9NYU2 1555 aa12.45□□□□□ -0.42
LINC00963-219ENST00000624390 TXNDC2Q86VQ3 553 aa12.45□□□□□ -0.42
LINC00963-219ENST00000624390 EID1Q9Y6B2 187 aa12.45□□□□□ -0.42
LINC00963-219ENST00000624390 NOS1P29475 1434 aa12.44□□□□□ -0.42
LINC00963-219ENST00000624390 EFCAB6Q5THR3 1501 aa12.43□□□□□ -0.42
LINC00963-219ENST00000624390 PLA2R1Q13018 1463 aa12.43□□□□□ -0.42
LINC00963-219ENST00000624390 BCANQ96GW7 911 aa12.43□□□□□ -0.42
LINC00963-219ENST00000624390 PTPRTO14522 1441 aa12.43□□□□□ -0.42
LINC00963-219ENST00000624390 SETD5Q9C0A6 1442 aa12.43□□□□□ -0.42
LINC00963-219ENST00000624390 UNC13BO14795 1591 aa12.43□□□□□ -0.42
LINC00963-219ENST00000624390 RPRD2Q5VT52 1461 aaKnown RBP12.42□□□□□ -0.42
LINC00963-219ENST00000624390 LTKP29376 864 aa12.42□□□□□ -0.42
LINC00963-219ENST00000624390 FOXD1Q16676 465 aa12.41□□□□□ -0.42
LINC00963-219ENST00000624390 CFAP65Q6ZU64 1925 aaKnown RBP12.41□□□□□ -0.42
LINC00963-219ENST00000624390 HDGFP51858 240 aaKnown RBP12.4□□□□□ -0.42
LINC00963-219ENST00000624390 MPHOSPH9Q99550 1183 aa12.4□□□□□ -0.42
LINC00963-219ENST00000624390 TET3O43151 1660 aa12.39□□□□□ -0.43
LINC00963-219ENST00000624390 PPP1R15AO75807 674 aaPredicted RBP12.39□□□□□ -0.43
LINC00963-219ENST00000624390 ZNF326Q5BKZ1 582 aaKnown RBP12.39□□□□□ -0.43
LINC00963-219ENST00000624390 NUTM2DQ5VT03 806 aaPredicted RBP12.39□□□□□ -0.43
LINC00963-219ENST00000624390 CERKQ8TCT0 537 aa12.39□□□□□ -0.43
LINC00963-219ENST00000624390 TMEM2Q9UHN6 1383 aa12.39□□□□□ -0.43
LINC00963-219ENST00000624390 ZNF142P52746 1687 aaPredicted RBP12.38□□□□□ -0.43
LINC00963-219ENST00000624390 ZNF335Q9H4Z2 1342 aaPredicted RBP12.38□□□□□ -0.43
LINC00963-219ENST00000624390 ACIN1Q9UKV3 1341 aaKnown RBP12.38□□□□□ -0.43
LINC00963-219ENST00000624390 STRCQ7RTU9 1775 aa12.38□□□□□ -0.43
LINC00963-219ENST00000624390 IQGAP3Q86VI3 1631 aa12.38□□□□□ -0.43
LINC00963-219ENST00000624390 RAB3GAP2Q9H2M9 1393 aa12.38□□□□□ -0.43
LINC00963-219ENST00000624390 NPHP4O75161 1426 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-219ENST00000624390 SYNMO15061 1565 aa12.37□□□□□ -0.43
LINC00963-219ENST00000624390 GCC2Q8IWJ2 1684 aa12.36□□□□□ -0.43
LINC00963-219ENST00000624390 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC00963-219ENST00000624390 SLC26A8Q96RN1 970 aa12.35□□□□□ -0.43
LINC00963-219ENST00000624390 SCAF11Q99590 1463 aaKnown RBP12.34□□□□□ -0.43
LINC00963-219ENST00000624390 PIK3C2BO00750 1634 aa12.34□□□□□ -0.43
LINC00963-219ENST00000624390 E9PCH4 1651 aa12.34□□□□□ -0.43
LINC00963-219ENST00000624390 HRCP23327 699 aa12.33□□□□□ -0.44
LINC00963-219ENST00000624390 ILDR1Q86SU0 546 aaPredicted RBP12.33□□□□□ -0.44
LINC00963-219ENST00000624390 RIMS2Q9UQ26 1411 aa12.33□□□□□ -0.44
LINC00963-219ENST00000624390 ARHGAP23Q9P227 1491 aa12.33□□□□□ -0.44
LINC00963-219ENST00000624390 SLIT1O75093 1534 aa12.32□□□□□ -0.44
LINC00963-219ENST00000624390 MED14O60244 1454 aa12.32□□□□□ -0.44
LINC00963-219ENST00000624390 ADGRB3O60242 1522 aa12.32□□□□□ -0.44
LINC00963-219ENST00000624390 UBR1Q8IWV7 1749 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms