RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 IQGAP1P46940 1657 aa12.06□□□□□ -0.48
LINC00963-218ENST00000624138 RGS17Q9UGC6 210 aaPredicted RBP12.05□□□□□ -0.48
LINC00963-218ENST00000624138 ZNF777Q9ULD5 760 aaPredicted RBP12.05□□□□□ -0.48
LINC00963-218ENST00000624138 PLEKHH2Q8IVE3 1493 aa12.05□□□□□ -0.48
LINC00963-218ENST00000624138 RNF17Q9BXT8 1623 aaKnown RBP12.04□□□□□ -0.48
LINC00963-218ENST00000624138 SYNMO15061 1565 aa12.04□□□□□ -0.48
LINC00963-218ENST00000624138 ANKLE2Q86XL3 938 aa12.03□□□□□ -0.48
LINC00963-218ENST00000624138 TNRQ92752 1358 aa12.03□□□□□ -0.48
LINC00963-218ENST00000624138 LRRC7Q96NW7 1537 aa12.02□□□□□ -0.48
LINC00963-218ENST00000624138 FAM135AQ9P2D6 1515 aa12.02□□□□□ -0.48
LINC00963-218ENST00000624138 CFAP65Q6ZU64 1925 aaKnown RBP12.02□□□□□ -0.49
LINC00963-218ENST00000624138 NPHP4O75161 1426 aaPredicted RBP12.02□□□□□ -0.49
LINC00963-218ENST00000624138 PZPP20742 1482 aa12.02□□□□□ -0.49
LINC00963-218ENST00000624138 ZC3H13Q5T200 1668 aaKnown RBP12.01□□□□□ -0.49
LINC00963-218ENST00000624138 FBXO31Q5XUX0 539 aaPredicted RBP12.01□□□□□ -0.49
LINC00963-218ENST00000624138 THEMISQ8N1K5 641 aaPredicted RBP12.01□□□□□ -0.49
LINC00963-218ENST00000624138 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC00963-218ENST00000624138 UGGT1Q9NYU2 1555 aa12.01□□□□□ -0.49
LINC00963-218ENST00000624138 CFDP1Q9UEE9 299 aaPredicted RBP11.99□□□□□ -0.49
LINC00963-218ENST00000624138 DHX29Q7Z478 1369 aaKnown RBP11.99□□□□□ -0.49
LINC00963-218ENST00000624138 RTEL1-TNFRSF6BF6WH68 1400 aa11.99□□□□□ -0.49
LINC00963-218ENST00000624138 FYCO1Q9BQS8 1478 aa11.99□□□□□ -0.49
LINC00963-218ENST00000624138 NLRP1Q9C000 1473 aa11.99□□□□□ -0.49
LINC00963-218ENST00000624138 KDM5DQ9BY66 1539 aa11.99□□□□□ -0.49
LINC00963-218ENST00000624138 MIA2Q96PC5 1412 aa11.98□□□□□ -0.49
LINC00963-218ENST00000624138 EHMT2Q96KQ7 1210 aa11.98□□□□□ -0.49
LINC00963-218ENST00000624138 MBD5Q9P267 1494 aa11.97□□□□□ -0.49
LINC00963-218ENST00000624138 SETD1AO15047 1707 aaKnown RBP11.95□□□□□ -0.5
LINC00963-218ENST00000624138 UBR1Q8IWV7 1749 aa11.95□□□□□ -0.5
LINC00963-218ENST00000624138 SENP3Q9H4L4 574 aaPredicted RBP11.95□□□□□ -0.5
LINC00963-218ENST00000624138 CCNB3Q8WWL7 1395 aa11.94□□□□□ -0.5
LINC00963-218ENST00000624138 KIF3BO15066 747 aa11.94□□□□□ -0.5
LINC00963-218ENST00000624138 POTEAQ6S8J7 498 aa11.94□□□□□ -0.5
LINC00963-218ENST00000624138 TIAM1Q13009 1591 aa11.93□□□□□ -0.5
LINC00963-218ENST00000624138 ZNF644Q9H582 1327 aaPredicted RBP11.92□□□□□ -0.5
LINC00963-218ENST00000624138 WASHC2CQ9Y4E1 1318 aa11.92□□□□□ -0.5
LINC00963-218ENST00000624138 FAM135BQ49AJ0 1406 aa11.91□□□□□ -0.5
LINC00963-218ENST00000624138 ROBO1Q9Y6N7 1651 aa11.9□□□□□ -0.5
LINC00963-218ENST00000624138 CEP152O94986 1710 aa11.88□□□□□ -0.51
LINC00963-218ENST00000624138 CCDC141Q6ZP82 1450 aa11.87□□□□□ -0.51
LINC00963-218ENST00000624138 ABCC3O15438 1527 aa11.86□□□□□ -0.51
LINC00963-218ENST00000624138 SLIT1O75093 1534 aa11.86□□□□□ -0.51
LINC00963-218ENST00000624138 RSPH4AQ5TD94 716 aa11.86□□□□□ -0.51
LINC00963-218ENST00000624138 MTUS2Q5JR59 1369 aa11.86□□□□□ -0.51
LINC00963-218ENST00000624138 ERVK-7P63135 1459 aa11.86□□□□□ -0.51
LINC00963-218ENST00000624138 SCAF11Q99590 1463 aaKnown RBP11.86□□□□□ -0.51
LINC00963-218ENST00000624138 ARHGAP23Q9P227 1491 aa11.86□□□□□ -0.51
LINC00963-218ENST00000624138 NCOA2Q15596 1464 aa11.85□□□□□ -0.51
LINC00963-218ENST00000624138 PHLPP1O60346 1717 aa11.85□□□□□ -0.51
LINC00963-218ENST00000624138 EIF2AK4Q9P2K8 1649 aaKnown RBP11.85□□□□□ -0.51
LINC00963-218ENST00000624138 EHBP1L1Q8N3D4 1523 aa11.85□□□□□ -0.51
LINC00963-218ENST00000624138 ARHGEF5Q12774 1597 aa11.84□□□□□ -0.51
LINC00963-218ENST00000624138 LTKP29376 864 aa11.84□□□□□ -0.51
LINC00963-218ENST00000624138 MROH1Q8NDA8 1641 aa11.83□□□□□ -0.52
LINC00963-218ENST00000624138 CEP162Q5TB80 1403 aa11.83□□□□□ -0.52
LINC00963-218ENST00000624138 CAMSAP2Q08AD1 1489 aa11.83□□□□□ -0.52
LINC00963-218ENST00000624138 KDM5AP29375 1690 aaKnown RBP11.82□□□□□ -0.52
LINC00963-218ENST00000624138 MAP3K1Q13233 1512 aa11.81□□□□□ -0.52
LINC00963-218ENST00000624138 MAST1Q9Y2H9 1570 aa11.81□□□□□ -0.52
LINC00963-218ENST00000624138 TXNDC2Q86VQ3 553 aa11.81□□□□□ -0.52
LINC00963-218ENST00000624138 PIK3C2BO00750 1634 aa11.8□□□□□ -0.52
LINC00963-218ENST00000624138 UPF1Q92900 1129 aaKnown RBP eCLIP11.8□□□□□ -0.522e-6■■■■□ 19.9
LINC00963-218ENST00000624138 LRRC9Q6ZRR7 1453 aa11.8□□□□□ -0.52
LINC00963-218ENST00000624138 TET3O43151 1660 aa11.79□□□□□ -0.52
LINC00963-218ENST00000624138 CHD2O14647 1828 aaKnown RBP11.79□□□□□ -0.52
LINC00963-218ENST00000624138 TMEM94Q12767 1356 aa11.79□□□□□ -0.52
LINC00963-218ENST00000624138 NWD1Q149M9 1564 aa11.77□□□□□ -0.53
LINC00963-218ENST00000624138 TSPY4P0CV99 314 aa11.77□□□□□ -0.53
LINC00963-218ENST00000624138 TSPY10P0CW01 314 aa11.77□□□□□ -0.53
LINC00963-218ENST00000624138 KCNA6P17658 529 aa11.77□□□□□ -0.53
LINC00963-218ENST00000624138 EID1Q9Y6B2 187 aa11.77□□□□□ -0.53
LINC00963-218ENST00000624138 COL16A1Q07092 1604 aaPredicted RBP11.77□□□□□ -0.53
LINC00963-218ENST00000624138 JCADQ9P266 1359 aa11.77□□□□□ -0.53
LINC00963-218ENST00000624138 ARHGAP31Q2M1Z3 1444 aa11.77□□□□□ -0.53
LINC00963-218ENST00000624138 PRDM15P57071 1507 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-218ENST00000624138 SHPRHQ149N8 1683 aa11.75□□□□□ -0.53
LINC00963-218ENST00000624138 TMEM2Q9UHN6 1383 aa11.75□□□□□ -0.53
LINC00963-218ENST00000624138 CHIC1Q5VXU3 224 aa11.74□□□□□ -0.53
LINC00963-218ENST00000624138 PROSER2Q86WR7 435 aaPredicted RBP11.74□□□□□ -0.53
LINC00963-218ENST00000624138 NKTRP30414 1462 aaKnown RBP11.74□□□□□ -0.53
LINC00963-218ENST00000624138 LRP6O75581 1613 aa11.73□□□□□ -0.53
LINC00963-218ENST00000624138 MYO5BQ9ULV0 1848 aa11.73□□□□□ -0.53
LINC00963-218ENST00000624138 ZNF772Q68DY9 489 aaPredicted RBP11.72□□□□□ -0.53
LINC00963-218ENST00000624138 SLAIN2Q9P270 581 aa11.72□□□□□ -0.53
LINC00963-218ENST00000624138 EFCAB6Q5THR3 1501 aa11.71□□□□□ -0.53
LINC00963-218ENST00000624138 DUOX2Q9NRD8 1548 aa11.71□□□□□ -0.53
LINC00963-218ENST00000624138 FGD6Q6ZV73 1430 aa11.71□□□□□ -0.53
LINC00963-218ENST00000624138 MSH6P52701 1360 aa11.71□□□□□ -0.53
LINC00963-218ENST00000624138 SPATA31A6Q5VVP1 1343 aa11.71□□□□□ -0.53
LINC00963-218ENST00000624138 RBM33Q96EV2 1170 aaKnown RBP11.71□□□□□ -0.53
LINC00963-218ENST00000624138 CDK12Q9NYV4 1490 aaPredicted RBP11.7□□□□□ -0.54
LINC00963-218ENST00000624138 AHDC1Q5TGY3 1603 aaPredicted RBP11.69□□□□□ -0.54
LINC00963-218ENST00000624138 TRIM52Q96A61 297 aa11.69□□□□□ -0.54
LINC00963-218ENST00000624138 SLC26A8Q96RN1 970 aa11.69□□□□□ -0.54
LINC00963-218ENST00000624138 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.69□□□□□ -0.54
LINC00963-218ENST00000624138 RXRBP28702 533 aa11.67□□□□□ -0.54
LINC00963-218ENST00000624138 IDI1Q13907 227 aa11.67□□□□□ -0.54
LINC00963-218ENST00000624138 CROCC2H7BZ55 1655 aa11.67□□□□□ -0.54
LINC00963-218ENST00000624138 STAG3Q9UJ98 1225 aa11.66□□□□□ -0.54
LINC00963-218ENST00000624138 NCOA3Q9Y6Q9 1424 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms