RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.3□□□□□ -1.72
ATRX-212ENST00000623706 HSP90AB1P08238 724 aaKnown RBP4.3□□□□□ -1.72
ATRX-212ENST00000623706 ARID4AP29374 1257 aaPredicted RBP4.3□□□□□ -1.72
ATRX-212ENST00000623706 CDK5RAP3Q96JB5 506 aa4.3□□□□□ -1.72
ATRX-212ENST00000623706 TPX2Q9ULW0 747 aaKnown RBP4.3□□□□□ -1.72
ATRX-212ENST00000623706 CDR1P51861 262 aa4.3□□□□□ -1.72
ATRX-212ENST00000623706 SLMAPQ14BN4 828 aa4.3□□□□□ -1.72
ATRX-212ENST00000623706 ENOX2Q16206 610 aaKnown RBP4.3□□□□□ -1.72
ATRX-212ENST00000623706 NPM1P06748 294 aaKnown RBP eCLIP4.29□□□□□ -1.72
ATRX-212ENST00000623706 ZCRB1Q8TBF4 217 aaKnown RBP4.29□□□□□ -1.72
ATRX-212ENST00000623706 IPO9Q96P70 1041 aaKnown RBP4.29□□□□□ -1.72
ATRX-212ENST00000623706 CWC15Q9P013 229 aaKnown RBP4.29□□□□□ -1.72
ATRX-212ENST00000623706 SWAP70Q9UH65 585 aa4.29□□□□□ -1.72
ATRX-212ENST00000623706 SALL2Q9Y467 1007 aaPredicted RBP4.29□□□□□ -1.72
ATRX-212ENST00000623706 A0A0G2JS52 829 aa4.29□□□□□ -1.72
ATRX-212ENST00000623706 SHTN1A0MZ66 631 aa4.29□□□□□ -1.72
ATRX-212ENST00000623706 SPATA24Q86W54 205 aa4.29□□□□□ -1.72
ATRX-212ENST00000623706 PUS7Q96PZ0 661 aaKnown RBP4.29□□□□□ -1.72
ATRX-212ENST00000623706 NUCB2P80303 420 aa4.28□□□□□ -1.72
ATRX-212ENST00000623706 RNF168Q8IYW5 571 aaPredicted RBP4.28□□□□□ -1.72
ATRX-212ENST00000623706 SPRYD3Q8NCJ5 442 aa4.28□□□□□ -1.72
ATRX-212ENST00000623706 GZF1Q9H116 711 aaPredicted RBP4.28□□□□□ -1.72
ATRX-212ENST00000623706 CENPHQ9H3R5 247 aa4.28□□□□□ -1.72
ATRX-212ENST00000623706 DIAPH3Q9NSV4 1193 aa4.28□□□□□ -1.72
ATRX-212ENST00000623706 TPM3P06753 285 aa4.28□□□□□ -1.72
ATRX-212ENST00000623706 OFD1O75665 1012 aa4.28□□□□□ -1.72
ATRX-212ENST00000623706 ALS2CR12Q96Q35 445 aa4.28□□□□□ -1.72
ATRX-212ENST00000623706 PES1O00541 588 aaKnown RBP4.28□□□□□ -1.72
ATRX-212ENST00000623706 CFAP57Q96MR6 1250 aa4.28□□□□□ -1.72
ATRX-212ENST00000623706 MYH16Q9H6N6 1097 aa4.28□□□□□ -1.72
ATRX-212ENST00000623706 DNAJC2Q99543 621 aaKnown RBP4.28□□□□□ -1.72
ATRX-212ENST00000623706 ZC4H2Q9NQZ6 224 aa4.28□□□□□ -1.72
ATRX-212ENST00000623706 LMOD3Q0VAK6 560 aa4.27□□□□□ -1.73
ATRX-212ENST00000623706 ZBTB12Q9Y330 459 aaPredicted RBP4.27□□□□□ -1.73
ATRX-212ENST00000623706 TMCO4Q5TGY1 634 aa4.27□□□□□ -1.73
ATRX-212ENST00000623706 CEP63Q96MT8 703 aa4.27□□□□□ -1.73
ATRX-212ENST00000623706 DDX23Q9BUQ8 820 aaKnown RBP4.27□□□□□ -1.73
ATRX-212ENST00000623706 MYO6Q9UM54 1294 aa4.27□□□□□ -1.73
ATRX-212ENST00000623706 LIMCH1Q9UPQ0 1083 aa4.27□□□□□ -1.73
ATRX-212ENST00000623706 HDAC5Q9UQL6 1122 aa4.27□□□□□ -1.73
ATRX-212ENST00000623706 IRX3P78415 501 aaPredicted RBP4.27□□□□□ -1.73
ATRX-212ENST00000623706 JAKMIP3Q5VZ66 844 aa4.27□□□□□ -1.73
ATRX-212ENST00000623706 WHAMMQ8TF30 809 aa4.27□□□□□ -1.73
ATRX-212ENST00000623706 DBN1Q16643 649 aa4.27□□□□□ -1.73
ATRX-212ENST00000623706 CAVIN1Q6NZI2 390 aaKnown RBP4.27□□□□□ -1.73
ATRX-212ENST00000623706 ZNF592Q92610 1267 aa4.27□□□□□ -1.73
ATRX-212ENST00000623706 NOL8Q76FK4 1167 aaKnown RBP4.26□□□□□ -1.73
ATRX-212ENST00000623706 HSCBQ8IWL3 235 aa4.26□□□□□ -1.73
ATRX-212ENST00000623706 BANK1Q8NDB2 785 aa4.26□□□□□ -1.73
ATRX-212ENST00000623706 FBXW7Q969H0 707 aa4.26□□□□□ -1.73
ATRX-212ENST00000623706 RBBP5Q15291 538 aaKnown RBP4.26□□□□□ -1.73
ATRX-212ENST00000623706 SYAP1Q96A49 352 aaPredicted RBP4.26□□□□□ -1.73
ATRX-212ENST00000623706 ANKRD62A6NC57 917 aa4.26□□□□□ -1.73
ATRX-212ENST00000623706 SETSIPP0DME0 302 aa4.26□□□□□ -1.73
ATRX-212ENST00000623706 ZBTB41Q5SVQ8 909 aa4.26□□□□□ -1.73
ATRX-212ENST00000623706 FAM160A1Q05DH4 1040 aa4.26□□□□□ -1.73
ATRX-212ENST00000623706 RUFY1Q96T51 708 aa4.26□□□□□ -1.73
ATRX-212ENST00000623706 GBP2P32456 591 aaPredicted RBP4.25□□□□□ -1.73
ATRX-212ENST00000623706 MAP3K7CLP57077 242 aa4.25□□□□□ -1.73
ATRX-212ENST00000623706 FGD1P98174 961 aa4.25□□□□□ -1.73
ATRX-212ENST00000623706 TTLL5Q6EMB2 1281 aa4.25□□□□□ -1.73
ATRX-212ENST00000623706 CNKSR2Q8WXI2 1034 aa4.25□□□□□ -1.73
ATRX-212ENST00000623706 NUB1Q9Y5A7 615 aa4.25□□□□□ -1.73
ATRX-212ENST00000623706 TRIM6-TRIM34B2RNG4 842 aa4.25□□□□□ -1.73
ATRX-212ENST00000623706 HMGB1P1B2RPK0 211 aaPredicted RBP4.25□□□□□ -1.73
ATRX-212ENST00000623706 LRRC43Q8N309 656 aa4.25□□□□□ -1.73
ATRX-212ENST00000623706 CEP135Q66GS9 1140 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 HOMER1Q86YM7 354 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 TRIM55Q9BYV6 548 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 MFAP1P55081 439 aaKnown RBP4.24□□□□□ -1.73
ATRX-212ENST00000623706 CCDC91Q7Z6B0 441 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 GOLGA6L7A0A1B0GV03 622 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 FRMD3A2A2Y4 597 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 ZWINTO95229 277 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 WWC2Q6AWC2 1192 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 CCDC97Q96F63 343 aaPredicted RBP4.24□□□□□ -1.73
ATRX-212ENST00000623706 SATB2Q9UPW6 733 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 GOLIM4O00461 696 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 NEUROD2Q15784 382 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 GBP4Q96PP9 640 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 PRDM10Q9NQV6 1147 aa4.24□□□□□ -1.73
ATRX-212ENST00000623706 LETM1O95202 739 aaPredicted RBP4.24□□□□□ -1.73
ATRX-212ENST00000623706 TPM2P07951 284 aa4.23□□□□□ -1.73
ATRX-212ENST00000623706 HNRNPUL2Q1KMD3 747 aaKnown RBP4.23□□□□□ -1.73
ATRX-212ENST00000623706 CFAP45Q9UL16 551 aa4.23□□□□□ -1.73
ATRX-212ENST00000623706 KIF3BO15066 747 aa4.23□□□□□ -1.73
ATRX-212ENST00000623706 FAM193AP78312 1265 aa4.23□□□□□ -1.73
ATRX-212ENST00000623706 STK10O94804 968 aaKnown RBP4.23□□□□□ -1.73
ATRX-212ENST00000623706 SMC2O95347 1197 aa4.23□□□□□ -1.73
ATRX-212ENST00000623706 MBD3O95983 291 aa4.23□□□□□ -1.73
ATRX-212ENST00000623706 BMS1Q14692 1282 aaKnown RBP4.23□□□□□ -1.73
ATRX-212ENST00000623706 SEPT7Q16181 437 aaKnown RBP4.23□□□□□ -1.73
ATRX-212ENST00000623706 CCDC144CPQ8IYA2 1237 aa4.23□□□□□ -1.73
ATRX-212ENST00000623706 CCDC152Q4G0S7 254 aa4.23□□□□□ -1.73
ATRX-212ENST00000623706 NOP2P46087 812 aaKnown RBP4.23□□□□□ -1.73
ATRX-212ENST00000623706 CGNQ9P2M7 1197 aaKnown RBP4.23□□□□□ -1.73
ATRX-212ENST00000623706 PLEKHD1A6NEE1 506 aa4.22□□□□□ -1.73
ATRX-212ENST00000623706 KIF3CO14782 793 aa4.22□□□□□ -1.73
ATRX-212ENST00000623706 RAD21O60216 631 aa4.22□□□□□ -1.73
ATRX-212ENST00000623706 FEZ2Q9UHY8 353 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms