RNA–Protein interactions for RNA: ENST00000622934.3

SMIM11B-203, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-203ENST00000622934 MYO3AQ8NEV4 1616 aa12.76□□□□□ -0.37
SMIM11B-203ENST00000622934 IFNLR1Q8IU57 520 aaPredicted RBP12.75□□□□□ -0.37
SMIM11B-203ENST00000622934 RANGAP1P46060 587 aaPredicted RBP12.74□□□□□ -0.37
SMIM11B-203ENST00000622934 CDK11AQ9UQ88 783 aaPredicted RBP12.74□□□□□ -0.37
SMIM11B-203ENST00000622934 ZBTB12Q9Y330 459 aaPredicted RBP12.74□□□□□ -0.37
SMIM11B-203ENST00000622934 SHANK2Q9UPX8 1470 aa12.73□□□□□ -0.37
SMIM11B-203ENST00000622934 KIF14Q15058 1648 aa12.72□□□□□ -0.37
SMIM11B-203ENST00000622934 RGS17Q9UGC6 210 aaPredicted RBP12.7□□□□□ -0.38
SMIM11B-203ENST00000622934 A2ML1A8K2U0 1454 aa12.68□□□□□ -0.38
SMIM11B-203ENST00000622934 ABCB7O75027 752 aa12.68□□□□□ -0.38
SMIM11B-203ENST00000622934 CLIP1P30622 1438 aa12.68□□□□□ -0.38
SMIM11B-203ENST00000622934 POLR1AO95602 1720 aaPredicted RBP12.68□□□□□ -0.38
SMIM11B-203ENST00000622934 KIDINS220Q9ULH0 1771 aa12.67□□□□□ -0.38
SMIM11B-203ENST00000622934 ABCC1P33527 1531 aa12.67□□□□□ -0.38
SMIM11B-203ENST00000622934 CLTCQ00610 1675 aaKnown RBP12.67□□□□□ -0.38
SMIM11B-203ENST00000622934 ALKQ9UM73 1620 aa12.66□□□□□ -0.38
SMIM11B-203ENST00000622934 ATP1B4Q9UN42 357 aaPredicted RBP12.66□□□□□ -0.38
SMIM11B-203ENST00000622934 TROQ12816 1431 aaPredicted RBP12.65□□□□□ -0.38
SMIM11B-203ENST00000622934 ITSN2Q9NZM3 1697 aa12.65□□□□□ -0.38
SMIM11B-203ENST00000622934 DNMT1P26358 1616 aaKnown RBP12.65□□□□□ -0.38
SMIM11B-203ENST00000622934 NEURL4Q96JN8 1562 aa12.64□□□□□ -0.39
SMIM11B-203ENST00000622934 POTEAQ6S8J7 498 aa12.63□□□□□ -0.39
SMIM11B-203ENST00000622934 VWDEQ8N2E2 1590 aa12.63□□□□□ -0.39
SMIM11B-203ENST00000622934 RNF17Q9BXT8 1623 aaKnown RBP12.62□□□□□ -0.39
SMIM11B-203ENST00000622934 CDC42BPBQ9Y5S2 1711 aa12.62□□□□□ -0.39
SMIM11B-203ENST00000622934 PLCB2Q00722 1185 aa12.62□□□□□ -0.39
SMIM11B-203ENST00000622934 ANKLE2Q86XL3 938 aa12.62□□□□□ -0.39
SMIM11B-203ENST00000622934 PREX2Q70Z35 1606 aa12.61□□□□□ -0.39
SMIM11B-203ENST00000622934 FMN1Q68DA7 1419 aa12.61□□□□□ -0.39
SMIM11B-203ENST00000622934 GGT6Q6P531 493 aa12.59□□□□□ -0.39
SMIM11B-203ENST00000622934 SYNMO15061 1565 aa12.59□□□□□ -0.39
SMIM11B-203ENST00000622934 SAMD9LQ8IVG5 1584 aa12.59□□□□□ -0.39
SMIM11B-203ENST00000622934 SPAG9O60271 1321 aaKnown RBP12.59□□□□□ -0.39
SMIM11B-203ENST00000622934 NPHP4O75161 1426 aaPredicted RBP12.58□□□□□ -0.4
SMIM11B-203ENST00000622934 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
SMIM11B-203ENST00000622934 TNRQ92752 1358 aa12.57□□□□□ -0.4
SMIM11B-203ENST00000622934 PLXNC1O60486 1568 aa12.57□□□□□ -0.4
SMIM11B-203ENST00000622934 THEMISQ8N1K5 641 aaPredicted RBP12.57□□□□□ -0.4
SMIM11B-203ENST00000622934 A2MP01023 1474 aa12.57□□□□□ -0.4
SMIM11B-203ENST00000622934 SETD1AO15047 1707 aaKnown RBP12.57□□□□□ -0.4
SMIM11B-203ENST00000622934 MED14O60244 1454 aa12.56□□□□□ -0.4
SMIM11B-203ENST00000622934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMIM11B-203ENST00000622934 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
SMIM11B-203ENST00000622934 ATP7AQ04656 1500 aa12.55□□□□□ -0.4
SMIM11B-203ENST00000622934 SRCAPQ6ZRS2 3230 aa12.54□□□□□ -0.4
SMIM11B-203ENST00000622934 IQGAP1P46940 1657 aa12.54□□□□□ -0.4
SMIM11B-203ENST00000622934 FAM135AQ9P2D6 1515 aa12.53□□□□□ -0.4
SMIM11B-203ENST00000622934 UPF1Q92900 1129 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMIM11B-203ENST00000622934 ZNF777Q9ULD5 760 aaPredicted RBP12.52□□□□□ -0.41
SMIM11B-203ENST00000622934 EEA1Q15075 1411 aa12.52□□□□□ -0.41
SMIM11B-203ENST00000622934 SYCP2Q9BX26 1530 aa12.52□□□□□ -0.41
SMIM11B-203ENST00000622934 DSG3P32926 999 aa12.51□□□□□ -0.41
SMIM11B-203ENST00000622934 NLRP1Q9C000 1473 aa12.51□□□□□ -0.41
SMIM11B-203ENST00000622934 UGGT1Q9NYU2 1555 aa12.51□□□□□ -0.41
SMIM11B-203ENST00000622934 INO80Q9ULG1 1556 aaPredicted RBP12.51□□□□□ -0.41
SMIM11B-203ENST00000622934 STRCP1A6NGW2 1772 aa12.51□□□□□ -0.41
SMIM11B-203ENST00000622934 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
SMIM11B-203ENST00000622934 FAM135BQ49AJ0 1406 aa12.5□□□□□ -0.41
SMIM11B-203ENST00000622934 PZPP20742 1482 aa12.5□□□□□ -0.41
SMIM11B-203ENST00000622934 CDC42BPAQ5VT25 1732 aa12.5□□□□□ -0.41
SMIM11B-203ENST00000622934 ADGBQ8N7X0 1667 aa12.48□□□□□ -0.41
SMIM11B-203ENST00000622934 PLEKHH2Q8IVE3 1493 aa12.48□□□□□ -0.41
SMIM11B-203ENST00000622934 HNRNPMP52272 730 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMIM11B-203ENST00000622934 FBXO31Q5XUX0 539 aaPredicted RBP12.48□□□□□ -0.41
SMIM11B-203ENST00000622934 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
SMIM11B-203ENST00000622934 MIA2Q96PC5 1412 aa12.46□□□□□ -0.41
SMIM11B-203ENST00000622934 KIAA1107Q9UPP5 1409 aa12.46□□□□□ -0.41
SMIM11B-203ENST00000622934 SPDYE2BA6NHP3 402 aa12.46□□□□□ -0.41
SMIM11B-203ENST00000622934 SPDYE6P0CI01 402 aa12.46□□□□□ -0.41
SMIM11B-203ENST00000622934 SPDYE2Q495Y8 402 aa12.46□□□□□ -0.41
SMIM11B-203ENST00000622934 SPOCK2Q92563 424 aa12.46□□□□□ -0.41
SMIM11B-203ENST00000622934 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.41
SMIM11B-203ENST00000622934 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.42
SMIM11B-203ENST00000622934 KDM5DQ9BY66 1539 aa12.45□□□□□ -0.42
SMIM11B-203ENST00000622934 KLHL34Q8N239 644 aa12.44□□□□□ -0.42
SMIM11B-203ENST00000622934 LRRIQ1Q96JM4 1722 aa12.44□□□□□ -0.42
SMIM11B-203ENST00000622934 ARHGAP35Q9NRY4 1499 aa12.44□□□□□ -0.42
SMIM11B-203ENST00000622934 WASHC2CQ9Y4E1 1318 aa12.42□□□□□ -0.42
SMIM11B-203ENST00000622934 ZNF772Q68DY9 489 aaPredicted RBP12.42□□□□□ -0.42
SMIM11B-203ENST00000622934 TRIM52Q96A61 297 aa12.42□□□□□ -0.42
SMIM11B-203ENST00000622934 POTEHQ6S545 545 aa12.41□□□□□ -0.42
SMIM11B-203ENST00000622934 ZC3H13Q5T200 1668 aaKnown RBP12.41□□□□□ -0.42
SMIM11B-203ENST00000622934 ROBO1Q9Y6N7 1651 aa12.41□□□□□ -0.42
SMIM11B-203ENST00000622934 GPATCH8Q9UKJ3 1502 aaKnown RBP12.41□□□□□ -0.42
SMIM11B-203ENST00000622934 DHX29Q7Z478 1369 aaKnown RBP12.41□□□□□ -0.42
SMIM11B-203ENST00000622934 JCADQ9P266 1359 aa12.41□□□□□ -0.42
SMIM11B-203ENST00000622934 LRRC9Q6ZRR7 1453 aa12.4□□□□□ -0.42
SMIM11B-203ENST00000622934 XIRP1Q702N8 1843 aaKnown RBP12.4□□□□□ -0.42
SMIM11B-203ENST00000622934 KIF3BO15066 747 aa12.4□□□□□ -0.42
SMIM11B-203ENST00000622934 HAP1P54257 671 aaPredicted RBP12.4□□□□□ -0.42
SMIM11B-203ENST00000622934 CFDP1Q9UEE9 299 aaPredicted RBP12.4□□□□□ -0.42
SMIM11B-203ENST00000622934 SCAF11Q99590 1463 aaKnown RBP12.39□□□□□ -0.43
SMIM11B-203ENST00000622934 UBTFP17480 764 aaKnown RBP12.38□□□□□ -0.43
SMIM11B-203ENST00000622934 MEX3CQ5U5Q3 659 aaKnown RBP12.38□□□□□ -0.43
SMIM11B-203ENST00000622934 RTEL1-TNFRSF6BF6WH68 1400 aa12.37□□□□□ -0.43
SMIM11B-203ENST00000622934 CASKIN1Q8WXD9 1431 aa12.37□□□□□ -0.43
SMIM11B-203ENST00000622934 TMEM94Q12767 1356 aa12.36□□□□□ -0.43
SMIM11B-203ENST00000622934 RXRBP28702 533 aa12.36□□□□□ -0.43
SMIM11B-203ENST00000622934 PLCD3Q8N3E9 789 aa12.36□□□□□ -0.43
SMIM11B-203ENST00000622934 PHLPP1O60346 1717 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms