RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 NUTM2AQ8IVF1 878 aaPredicted RBP15.11■□□□□ 0.01
SLC6A6-210ENST00000622186 WWC2Q6AWC2 1192 aa15.11■□□□□ 0.01
SLC6A6-210ENST00000622186 PCMTD1Q96MG8 357 aaPredicted RBP15.11■□□□□ 0.01
SLC6A6-210ENST00000622186 SYNE3Q6ZMZ3 975 aa15.1■□□□□ 0.01
SLC6A6-210ENST00000622186 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.1■□□□□ 0.01
SLC6A6-210ENST00000622186 GRM1Q13255 1194 aa15.1■□□□□ 0.01
SLC6A6-210ENST00000622186 RBM33Q96EV2 1170 aaKnown RBP15.09■□□□□ 0.01
SLC6A6-210ENST00000622186 CSPP1Q1MSJ5 1256 aa15.09■□□□□ 0.01
SLC6A6-210ENST00000622186 SCRIBQ14160 1630 aa15.09■□□□□ 0.01
SLC6A6-210ENST00000622186 GBP4Q96PP9 640 aa15.08■□□□□ 0
SLC6A6-210ENST00000622186 HMMRO75330 724 aa15.08■□□□□ 0
SLC6A6-210ENST00000622186 ODF2Q5BJF6 829 aa15.08■□□□□ 0
SLC6A6-210ENST00000622186 KIF3AQ9Y496 699 aa15.08■□□□□ 0
SLC6A6-210ENST00000622186 SETQ01105 290 aaPredicted RBP15.07■□□□□ 0
SLC6A6-210ENST00000622186 MAP3K9P80192 1104 aa15.07■□□□□ 0
SLC6A6-210ENST00000622186 TMEM87AQ8NBN3 555 aa15.06■□□□□ 0
SLC6A6-210ENST00000622186 MTMR7Q9Y216 660 aa15.06■□□□□ 0
SLC6A6-210ENST00000622186 CT47A1Q5JQC4 288 aaPredicted RBP15.06■□□□□ 0
SLC6A6-210ENST00000622186 RRP12Q5JTH9 1297 aaKnown RBP15.06■□□□□ 0
SLC6A6-210ENST00000622186 C1orf141Q5JVX7 400 aa15.06■□□□□ 0
SLC6A6-210ENST00000622186 H3BQV1 296 aa15.05■□□□□ 0
SLC6A6-210ENST00000622186 CHMP4BP1P59074 171 aa15.05■□□□□ 0
SLC6A6-210ENST00000622186 IFFO2Q5TF58 517 aa15.05■□□□□ 0
SLC6A6-210ENST00000622186 CCDC47Q96A33 483 aaKnown RBP15.05■□□□□ 0
SLC6A6-210ENST00000622186 IKQ13123 557 aaPredicted RBP15.05■□□□□ 0
SLC6A6-210ENST00000622186 FYB1O15117 783 aa15.05■□□□□ -0
SLC6A6-210ENST00000622186 TPM1P09493 284 aa15.05■□□□□ -0
SLC6A6-210ENST00000622186 KIF16BQ96L93 1317 aa15.05■□□□□ -0
SLC6A6-210ENST00000622186 CCAR2Q8N163 923 aaKnown RBP15.05■□□□□ -0
SLC6A6-210ENST00000622186 PTMSP20962 102 aa15.04■□□□□ -0
SLC6A6-210ENST00000622186 CCDC70Q6NSX1 233 aa15.04■□□□□ -0
SLC6A6-210ENST00000622186 TTC5Q8N0Z6 440 aa15.03■□□□□ -0
SLC6A6-210ENST00000622186 ZCCHC6Q5VYS8 1495 aaKnown RBP15.02■□□□□ -0
SLC6A6-210ENST00000622186 CCNB3Q8WWL7 1395 aa15.02■□□□□ -0
SLC6A6-210ENST00000622186 ZFYVE27Q5T4F4 411 aa15.02□□□□□ -0.01
SLC6A6-210ENST00000622186 FAM184AQ8NB25 1140 aa15.01□□□□□ -0.01
SLC6A6-210ENST00000622186 MIER1Q8N108 512 aa15.01□□□□□ -0.01
SLC6A6-210ENST00000622186 APPP05067 770 aa15.01□□□□□ -0.01
SLC6A6-210ENST00000622186 GZF1Q9H116 711 aaPredicted RBP15.01□□□□□ -0.01
SLC6A6-210ENST00000622186 RWDD1Q9H446 243 aaPredicted RBP15□□□□□ -0.01
SLC6A6-210ENST00000622186 TRIM29Q14134 588 aa15□□□□□ -0.01
SLC6A6-210ENST00000622186 NOP58Q9Y2X3 529 aaKnown RBP15□□□□□ -0.01
SLC6A6-210ENST00000622186 CA8P35219 290 aa14.99□□□□□ -0.01
SLC6A6-210ENST00000622186 FAM177BA6PVY3 158 aa14.98□□□□□ -0.01
SLC6A6-210ENST00000622186 CALRP27797 417 aaKnown RBP14.98□□□□□ -0.01
SLC6A6-210ENST00000622186 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.98□□□□□ -0.01
SLC6A6-210ENST00000622186 TERF2IPQ9NYB0 399 aa14.97□□□□□ -0.01
SLC6A6-210ENST00000622186 IPO7O95373 1038 aaKnown RBP14.97□□□□□ -0.01
SLC6A6-210ENST00000622186 MFAP1P55081 439 aaKnown RBP14.97□□□□□ -0.01
SLC6A6-210ENST00000622186 LRRFIP1Q32MZ4 808 aaKnown RBP14.97□□□□□ -0.01
SLC6A6-210ENST00000622186 FOXD4L5Q5VV16 416 aaPredicted RBP14.97□□□□□ -0.01
SLC6A6-210ENST00000622186 MCTP1Q6DN14 999 aa14.97□□□□□ -0.01
SLC6A6-210ENST00000622186 FOXD4L4Q8WXT5 416 aaPredicted RBP14.97□□□□□ -0.01
SLC6A6-210ENST00000622186 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
SLC6A6-210ENST00000622186 SMC4Q9NTJ3 1288 aa14.96□□□□□ -0.01
SLC6A6-210ENST00000622186 WASHC2AQ641Q2 1341 aa14.96□□□□□ -0.02
SLC6A6-210ENST00000622186 CPLX2Q6PUV4 134 aaKnown RBP14.95□□□□□ -0.02
SLC6A6-210ENST00000622186 CHMP4CQ96CF2 233 aa14.95□□□□□ -0.02
SLC6A6-210ENST00000622186 ANKRD20A12PQ8NF67 263 aa14.94□□□□□ -0.02
SLC6A6-210ENST00000622186 LMOD3Q0VAK6 560 aa14.94□□□□□ -0.02
SLC6A6-210ENST00000622186 CLIP1P30622 1438 aa14.94□□□□□ -0.02
SLC6A6-210ENST00000622186 NEXNQ0ZGT2 675 aa14.94□□□□□ -0.02
SLC6A6-210ENST00000622186 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.93□□□□□ -0.02
SLC6A6-210ENST00000622186 ERICH2A1L162 156 aa14.93□□□□□ -0.02
SLC6A6-210ENST00000622186 NAP1L1P55209 391 aaKnown RBP14.93□□□□□ -0.02
SLC6A6-210ENST00000622186 HSP90AB2PQ58FF8 381 aa14.93□□□□□ -0.02
SLC6A6-210ENST00000622186 NFXL1Q6ZNB6 911 aa14.93□□□□□ -0.02
SLC6A6-210ENST00000622186 RILPL2Q969X0 211 aa14.92□□□□□ -0.02
SLC6A6-210ENST00000622186 TEFQ10587 303 aa14.92□□□□□ -0.02
SLC6A6-210ENST00000622186 CCDC27Q2M243 656 aa14.92□□□□□ -0.02
SLC6A6-210ENST00000622186 SLKQ9H2G2 1235 aaPredicted RBP14.92□□□□□ -0.02
SLC6A6-210ENST00000622186 TTLL12Q14166 644 aaPredicted RBP14.91□□□□□ -0.02
SLC6A6-210ENST00000622186 GOLGA6L19H0YKK7 550 aa14.91□□□□□ -0.02
SLC6A6-210ENST00000622186 TCERG1O14776 1098 aaKnown RBP14.91□□□□□ -0.02
SLC6A6-210ENST00000622186 BECN2A8MW95 431 aa14.9□□□□□ -0.02
SLC6A6-210ENST00000622186 RBM5P52756 815 aaKnown RBP eCLIP14.9□□□□□ -0.02
SLC6A6-210ENST00000622186 PHF14O94880 888 aa14.9□□□□□ -0.02
SLC6A6-210ENST00000622186 C16orf71Q8IYS4 520 aaPredicted RBP14.89□□□□□ -0.03
SLC6A6-210ENST00000622186 EIF4G1Q04637 1599 aaKnown RBP14.89□□□□□ -0.03
SLC6A6-210ENST00000622186 CPLX1O14810 134 aa14.89□□□□□ -0.03
SLC6A6-210ENST00000622186 EIF2S2P20042 333 aaKnown RBP14.89□□□□□ -0.03
SLC6A6-210ENST00000622186 EPS15P42566 896 aa14.89□□□□□ -0.03
SLC6A6-210ENST00000622186 KTN1Q86UP2 1357 aaKnown RBP14.89□□□□□ -0.03
SLC6A6-210ENST00000622186 CYB5RLQ6IPT4 315 aa14.89□□□□□ -0.03
SLC6A6-210ENST00000622186 TRDNQ13061 729 aa14.88□□□□□ -0.03
SLC6A6-210ENST00000622186 RDXP35241 583 aaKnown RBP14.88□□□□□ -0.03
SLC6A6-210ENST00000622186 GPS2Q13227 327 aa14.88□□□□□ -0.03
SLC6A6-210ENST00000622186 ST18O60284 1047 aa14.87□□□□□ -0.03
SLC6A6-210ENST00000622186 PMFBP1Q8TBY8 1022 aa14.87□□□□□ -0.03
SLC6A6-210ENST00000622186 ATF3P18847 181 aa14.87□□□□□ -0.03
SLC6A6-210ENST00000622186 KDM4AO75164 1064 aa14.87□□□□□ -0.03
SLC6A6-210ENST00000622186 C9orf78Q9NZ63 289 aaPredicted RBP14.86□□□□□ -0.03
SLC6A6-210ENST00000622186 WASHC2CQ9Y4E1 1318 aa14.86□□□□□ -0.03
SLC6A6-210ENST00000622186 PLIN1O60240 522 aa14.86□□□□□ -0.03
SLC6A6-210ENST00000622186 ATP2B2Q01814 1243 aa14.86□□□□□ -0.03
SLC6A6-210ENST00000622186 STAC3Q96MF2 364 aa14.85□□□□□ -0.03
SLC6A6-210ENST00000622186 DIAPH3Q9NSV4 1193 aa14.85□□□□□ -0.03
SLC6A6-210ENST00000622186 MPHOSPH10O00566 681 aaKnown RBP14.85□□□□□ -0.03
SLC6A6-210ENST00000622186 KIF3BO15066 747 aa14.85□□□□□ -0.03
SLC6A6-210ENST00000622186 PSME1Q06323 249 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms