RNA–Protein interactions for RNA: ENST00000621987.4

FMR1-220, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-220ENST00000621987 DEPDC5O75140 1603 aa18.88■□□□□ 0.61
FMR1-220ENST00000621987 A2MP01023 1474 aa18.88■□□□□ 0.61
FMR1-220ENST00000621987 COL17A1Q9UMD9 1497 aaPredicted RBP18.87■□□□□ 0.61
FMR1-220ENST00000621987 NUP155O75694 1391 aa18.86■□□□□ 0.61
FMR1-220ENST00000621987 MYT1LQ9UL68 1186 aa18.86■□□□□ 0.61
FMR1-220ENST00000621987 IQGAP3Q86VI3 1631 aa18.86■□□□□ 0.61
FMR1-220ENST00000621987 BCORL1Q5H9F3 1711 aa18.85■□□□□ 0.61
FMR1-220ENST00000621987 FAM135AQ9P2D6 1515 aa18.84■□□□□ 0.61
FMR1-220ENST00000621987 SLC4A1APQ9BWU0 796 aaKnown RBP18.83■□□□□ 0.61
FMR1-220ENST00000621987 YEATS2Q9ULM3 1422 aa18.83■□□□□ 0.6
FMR1-220ENST00000621987 MROH1Q8NDA8 1641 aa18.82■□□□□ 0.6
FMR1-220ENST00000621987 RNF17Q9BXT8 1623 aaKnown RBP18.82■□□□□ 0.6
FMR1-220ENST00000621987 VWDEQ8N2E2 1590 aa18.81■□□□□ 0.6
FMR1-220ENST00000621987 PRDM15P57071 1507 aaPredicted RBP18.81■□□□□ 0.6
FMR1-220ENST00000621987 TRHP20396 242 aaPredicted RBP18.81■□□□□ 0.6
FMR1-220ENST00000621987 REREQ9P2R6 1566 aa18.8■□□□□ 0.6
FMR1-220ENST00000621987 ANKRD30BQ9BXX2 1392 aa18.79■□□□□ 0.6
FMR1-220ENST00000621987 SIN3AQ96ST3 1273 aa18.78■□□□□ 0.6
FMR1-220ENST00000621987 ATP10AO60312 1499 aa18.77■□□□□ 0.6
FMR1-220ENST00000621987 ARHGEF40Q8TER5 1519 aa18.77■□□□□ 0.6
FMR1-220ENST00000621987 KIF3BO15066 747 aa18.77■□□□□ 0.6
FMR1-220ENST00000621987 PKD2Q13563 968 aa18.77■□□□□ 0.6
FMR1-220ENST00000621987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.76■□□□□ 0.597e-7■■□□□ 12.3
FMR1-220ENST00000621987 TET3O43151 1660 aa18.73■□□□□ 0.59
FMR1-220ENST00000621987 TIMELESSQ9UNS1 1208 aa18.73■□□□□ 0.59
FMR1-220ENST00000621987 KANK1Q14678 1352 aa18.73■□□□□ 0.59
FMR1-220ENST00000621987 AGLP35573 1532 aa18.72■□□□□ 0.59
FMR1-220ENST00000621987 LMTK2Q8IWU2 1503 aa18.72■□□□□ 0.59
FMR1-220ENST00000621987 NEUROD1Q13562 356 aa18.7■□□□□ 0.58
FMR1-220ENST00000621987 RPRD2Q5VT52 1461 aaKnown RBP18.7■□□□□ 0.58
FMR1-220ENST00000621987 E9PCH4 1651 aa18.7■□□□□ 0.58
FMR1-220ENST00000621987 SIGLEC1Q9BZZ2 1709 aa18.68■□□□□ 0.58
FMR1-220ENST00000621987 CEP152O94986 1710 aa18.68■□□□□ 0.58
FMR1-220ENST00000621987 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
FMR1-220ENST00000621987 EFCAB6Q5THR3 1501 aa18.67■□□□□ 0.58
FMR1-220ENST00000621987 PLA2R1Q13018 1463 aa18.67■□□□□ 0.58
FMR1-220ENST00000621987 ABCC3O15438 1527 aa18.65■□□□□ 0.58
FMR1-220ENST00000621987 ZC3H13Q5T200 1668 aaKnown RBP18.65■□□□□ 0.58
FMR1-220ENST00000621987 TONSLQ96HA7 1378 aa18.63■□□□□ 0.57
FMR1-220ENST00000621987 GGT6Q6P531 493 aa18.63■□□□□ 0.57
FMR1-220ENST00000621987 PTPRTO14522 1441 aa18.63■□□□□ 0.57
FMR1-220ENST00000621987 SPHKAPQ2M3C7 1700 aa18.61■□□□□ 0.57
FMR1-220ENST00000621987 CAMSAP1Q5T5Y3 1602 aa18.61■□□□□ 0.57
FMR1-220ENST00000621987 TRPM2O94759 1503 aa18.61■□□□□ 0.57
FMR1-220ENST00000621987 PPP1R15AO75807 674 aaPredicted RBP18.58■□□□□ 0.57
FMR1-220ENST00000621987 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.57
FMR1-220ENST00000621987 WASHC2CQ9Y4E1 1318 aa18.58■□□□□ 0.56
FMR1-220ENST00000621987 CCDC144AA2RUR9 1427 aa18.58■□□□□ 0.56
FMR1-220ENST00000621987 ARHGAP31Q2M1Z3 1444 aa18.58■□□□□ 0.56
FMR1-220ENST00000621987 NPATQ14207 1427 aa18.56■□□□□ 0.56
FMR1-220ENST00000621987 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
FMR1-220ENST00000621987 CLTCL1P53675 1640 aa18.53■□□□□ 0.56
FMR1-220ENST00000621987 CLTCQ00610 1675 aaKnown RBP18.51■□□□□ 0.55
FMR1-220ENST00000621987 NOS1P29475 1434 aa18.5■□□□□ 0.55
FMR1-220ENST00000621987 CNTLNQ9NXG0 1405 aa18.5■□□□□ 0.55
FMR1-220ENST00000621987 NEURL4Q96JN8 1562 aa18.5■□□□□ 0.55
FMR1-220ENST00000621987 SPATA31E1Q6ZUB1 1445 aa18.48■□□□□ 0.55
FMR1-220ENST00000621987 PREX1Q8TCU6 1659 aa18.47■□□□□ 0.55
FMR1-220ENST00000621987 SYNMO15061 1565 aa18.47■□□□□ 0.55
FMR1-220ENST00000621987 UGGT1Q9NYU2 1555 aa18.47■□□□□ 0.55
FMR1-220ENST00000621987 PIK3C2BO00750 1634 aa18.46■□□□□ 0.55
FMR1-220ENST00000621987 MLECQ14165 292 aa18.45■□□□□ 0.54
FMR1-220ENST00000621987 ARID4BQ4LE39 1312 aaPredicted RBP18.45■□□□□ 0.54
FMR1-220ENST00000621987 UHRF1BP1Q6BDS2 1440 aa18.44■□□□□ 0.54
FMR1-220ENST00000621987 MROH2AA6NES4 1674 aa18.44■□□□□ 0.54
FMR1-220ENST00000621987 CFAP65Q6ZU64 1925 aaKnown RBP18.43■□□□□ 0.54
FMR1-220ENST00000621987 KIF1BO60333 1816 aa18.43■□□□□ 0.54
FMR1-220ENST00000621987 ERVK-7P63135 1459 aa18.42■□□□□ 0.54
FMR1-220ENST00000621987 NBPF8Q3BBV2 869 aa18.41■□□□□ 0.54
FMR1-220ENST00000621987 SPATA31D1Q6ZQQ2 1576 aa18.41■□□□□ 0.54
FMR1-220ENST00000621987 ADGRB3O60242 1522 aa18.4■□□□□ 0.54
FMR1-220ENST00000621987 ZMYM3Q14202 1370 aa18.38■□□□□ 0.53
FMR1-220ENST00000621987 RGL3Q3MIN7 710 aa18.38■□□□□ 0.53
FMR1-220ENST00000621987 DCAF11Q8TEB1 546 aa18.38■□□□□ 0.53
FMR1-220ENST00000621987 FER1L4A9Z1Z3 1794 aa18.37■□□□□ 0.53
FMR1-220ENST00000621987 ESF1Q9H501 851 aaKnown RBP18.37■□□□□ 0.53
FMR1-220ENST00000621987 IFT172Q9UG01 1749 aa18.36■□□□□ 0.53
FMR1-220ENST00000621987 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
FMR1-220ENST00000621987 FBXO31Q5XUX0 539 aaPredicted RBP18.36■□□□□ 0.53
FMR1-220ENST00000621987 SLC52A1Q9NWF4 448 aa18.36■□□□□ 0.53
FMR1-220ENST00000621987 PRAG1Q86YV5 1406 aa18.35■□□□□ 0.53
FMR1-220ENST00000621987 STAC3Q96MF2 364 aa18.34■□□□□ 0.53
FMR1-220ENST00000621987 RALGAPBQ86X10 1494 aa18.34■□□□□ 0.53
FMR1-220ENST00000621987 IDI1Q13907 227 aa18.32■□□□□ 0.52
FMR1-220ENST00000621987 KDM2AQ9Y2K7 1162 aa18.32■□□□□ 0.52
FMR1-220ENST00000621987 TMEM131LA2VDJ0 1609 aa18.32■□□□□ 0.52
FMR1-220ENST00000621987 TRPM1Q7Z4N2 1603 aa18.32■□□□□ 0.52
FMR1-220ENST00000621987 MADDQ8WXG6 1647 aa18.32■□□□□ 0.52
FMR1-220ENST00000621987 C3P01024 1663 aa18.32■□□□□ 0.52
FMR1-220ENST00000621987 MYOM2P54296 1465 aa18.32■□□□□ 0.52
FMR1-220ENST00000621987 ADAMTSL3P82987 1691 aa18.31■□□□□ 0.52
FMR1-220ENST00000621987 PPLO60437 1756 aa18.3■□□□□ 0.52
FMR1-220ENST00000621987 ZNF326Q5BKZ1 582 aaKnown RBP18.29■□□□□ 0.52
FMR1-220ENST00000621987 NRXN1Q9ULB1 1477 aa18.28■□□□□ 0.52
FMR1-220ENST00000621987 RPGRIP1LQ68CZ1 1315 aa18.28■□□□□ 0.52
FMR1-220ENST00000621987 MYO5BQ9ULV0 1848 aa18.28■□□□□ 0.52
FMR1-220ENST00000621987 NEXMIFQ5QGS0 1516 aa18.27■□□□□ 0.51
FMR1-220ENST00000621987 TNRQ92752 1358 aa18.26■□□□□ 0.51
FMR1-220ENST00000621987 LAMC1P11047 1609 aa18.26■□□□□ 0.51
FMR1-220ENST00000621987 CHGAP10645 457 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms