RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 CCDC141Q6ZP82 1450 aa26.97■■□□□ 1.91
TARDBP-225ENST00000621715 KIF3BO15066 747 aa26.94■■□□□ 1.9
TARDBP-225ENST00000621715 NEURL4Q96JN8 1562 aa26.93■■□□□ 1.9
TARDBP-225ENST00000621715 KDM5DQ9BY66 1539 aa26.91■■□□□ 1.9
TARDBP-225ENST00000621715 PZPP20742 1482 aa26.9■■□□□ 1.9
TARDBP-225ENST00000621715 POLR1AO95602 1720 aaPredicted RBP26.9■■□□□ 1.9
TARDBP-225ENST00000621715 TNRQ92752 1358 aa26.89■■□□□ 1.9
TARDBP-225ENST00000621715 UBAP1LF5GYI3 381 aa26.88■■□□□ 1.89
TARDBP-225ENST00000621715 ARHGEF5Q12774 1597 aa26.88■■□□□ 1.89
TARDBP-225ENST00000621715 SOCS7O14512 581 aa26.84■■□□□ 1.89
TARDBP-225ENST00000621715 FAM135AQ9P2D6 1515 aa26.83■■□□□ 1.89
TARDBP-225ENST00000621715 WASHC2CQ9Y4E1 1318 aa26.82■■□□□ 1.88
TARDBP-225ENST00000621715 LRRC9Q6ZRR7 1453 aa26.81■■□□□ 1.88
TARDBP-225ENST00000621715 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.8■■□□□ 1.881e-6■■■□□ 15.4
TARDBP-225ENST00000621715 RSPH4AQ5TD94 716 aa26.79■■□□□ 1.88
TARDBP-225ENST00000621715 MIA2Q96PC5 1412 aa26.79■■□□□ 1.88
TARDBP-225ENST00000621715 RNF17Q9BXT8 1623 aaKnown RBP26.79■■□□□ 1.88
TARDBP-225ENST00000621715 LOC105371045A0A1W2PR82 267 aa26.78■■□□□ 1.88
TARDBP-225ENST00000621715 VWDEQ8N2E2 1590 aa26.78■■□□□ 1.88
TARDBP-225ENST00000621715 VPS8Q8N3P4 1428 aa26.77■■□□□ 1.88
TARDBP-225ENST00000621715 KANK4Q5T7N3 995 aaPredicted RBP26.77■■□□□ 1.88
TARDBP-225ENST00000621715 MROH1Q8NDA8 1641 aa26.76■■□□□ 1.87
TARDBP-225ENST00000621715 MAST1Q9Y2H9 1570 aa26.76■■□□□ 1.87
TARDBP-225ENST00000621715 ABCC3O15438 1527 aa26.75■■□□□ 1.87
TARDBP-225ENST00000621715 SHANK2Q9UPX8 1470 aa26.75■■□□□ 1.87
TARDBP-225ENST00000621715 UGGT1Q9NYU2 1555 aa26.74■■□□□ 1.87
TARDBP-225ENST00000621715 NLRP1Q9C000 1473 aa26.74■■□□□ 1.87
TARDBP-225ENST00000621715 ALKQ9UM73 1620 aa26.72■■□□□ 1.87
TARDBP-225ENST00000621715 CPS1P31327 1500 aa26.72■■□□□ 1.87
TARDBP-225ENST00000621715 TSPY4P0CV99 314 aa26.72■■□□□ 1.87
TARDBP-225ENST00000621715 TSPY10P0CW01 314 aa26.72■■□□□ 1.87
TARDBP-225ENST00000621715 DEPDC5O75140 1603 aa26.71■■□□□ 1.87
TARDBP-225ENST00000621715 MED14O60244 1454 aa26.7■■□□□ 1.87
TARDBP-225ENST00000621715 STRCP1A6NGW2 1772 aa26.7■■□□□ 1.86
TARDBP-225ENST00000621715 CEP152O94986 1710 aa26.7■■□□□ 1.86
TARDBP-225ENST00000621715 ANKLE2Q86XL3 938 aa26.69■■□□□ 1.86
TARDBP-225ENST00000621715 ZC3H13Q5T200 1668 aaKnown RBP26.69■■□□□ 1.86
TARDBP-225ENST00000621715 CFAP65Q6ZU64 1925 aaKnown RBP26.69■■□□□ 1.86
TARDBP-225ENST00000621715 NPHP4O75161 1426 aaPredicted RBP26.68■■□□□ 1.86
TARDBP-225ENST00000621715 HSPA1LP34931 641 aa26.68■■□□□ 1.86
TARDBP-225ENST00000621715 EIF2AK4Q9P2K8 1649 aaKnown RBP26.68■■□□□ 1.86
TARDBP-225ENST00000621715 PIP4K2BP78356 416 aa26.67■■□□□ 1.86
TARDBP-225ENST00000621715 THEMISQ8N1K5 641 aaPredicted RBP26.67■■□□□ 1.86
TARDBP-225ENST00000621715 ERVK-7P63135 1459 aa26.67■■□□□ 1.86
TARDBP-225ENST00000621715 IQGAP1P46940 1657 aa26.66■■□□□ 1.86
TARDBP-225ENST00000621715 MYOM3Q5VTT5 1437 aa26.65■■□□□ 1.86
TARDBP-225ENST00000621715 MAP3K1Q13233 1512 aa26.64■■□□□ 1.85
TARDBP-225ENST00000621715 SCAF1Q9H7N4 1312 aaKnown RBP26.64■■□□□ 1.85
TARDBP-225ENST00000621715 UBR1Q8IWV7 1749 aa26.61■■□□□ 1.85
TARDBP-225ENST00000621715 MED1Q15648 1581 aaPredicted RBP26.59■■□□□ 1.85
TARDBP-225ENST00000621715 TOM1O60784 492 aa26.58■■□□□ 1.85
TARDBP-225ENST00000621715 CROCC2H7BZ55 1655 aa26.57■■□□□ 1.84
TARDBP-225ENST00000621715 DUOX2Q9NRD8 1548 aa26.57■■□□□ 1.84
TARDBP-225ENST00000621715 LRRC7Q96NW7 1537 aa26.55■■□□□ 1.84
TARDBP-225ENST00000621715 ABCC5O15440 1437 aa26.55■■□□□ 1.84
TARDBP-225ENST00000621715 PRDM15P57071 1507 aaPredicted RBP26.55■■□□□ 1.84
TARDBP-225ENST00000621715 KIF15Q9NS87 1388 aa26.52■■□□□ 1.84
TARDBP-225ENST00000621715 PTPN23Q9H3S7 1636 aa26.51■■□□□ 1.83
TARDBP-225ENST00000621715 LTKP29376 864 aa26.51■■□□□ 1.83
TARDBP-225ENST00000621715 ARHGAP23Q9P227 1491 aa26.49■■□□□ 1.83
TARDBP-225ENST00000621715 RRP7BPQ9NSQ0 103 aa26.49■■□□□ 1.83
TARDBP-225ENST00000621715 SCAF11Q99590 1463 aaKnown RBP26.49■■□□□ 1.83
TARDBP-225ENST00000621715 SYNMO15061 1565 aa26.48■■□□□ 1.83
TARDBP-225ENST00000621715 ARHGAP31Q2M1Z3 1444 aa26.48■■□□□ 1.83
TARDBP-225ENST00000621715 XIRP1Q702N8 1843 aaKnown RBP26.47■■□□□ 1.83
TARDBP-225ENST00000621715 SLIT1O75093 1534 aa26.47■■□□□ 1.83
TARDBP-225ENST00000621715 ERBINQ96RT1 1412 aa26.46■■□□□ 1.83
TARDBP-225ENST00000621715 PIK3C2BO00750 1634 aa26.46■■□□□ 1.83
TARDBP-225ENST00000621715 SENP3Q9H4L4 574 aaPredicted RBP26.45■■□□□ 1.82
TARDBP-225ENST00000621715 DAPK1P53355 1430 aa26.45■■□□□ 1.82
TARDBP-225ENST00000621715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.42■■□□□ 1.822e-9■■□□□ 13.4
TARDBP-225ENST00000621715 TXNDC2Q86VQ3 553 aa26.41■■□□□ 1.82
TARDBP-225ENST00000621715 FGD6Q6ZV73 1430 aa26.39■■□□□ 1.82
TARDBP-225ENST00000621715 CHIC2Q9UKJ5 165 aa26.36■■□□□ 1.81
TARDBP-225ENST00000621715 TMEM2Q9UHN6 1383 aa26.35■■□□□ 1.81
TARDBP-225ENST00000621715 LMTK2Q8IWU2 1503 aa26.34■■□□□ 1.81
TARDBP-225ENST00000621715 IDI1Q13907 227 aa26.32■■□□□ 1.8
TARDBP-225ENST00000621715 EFCAB6Q5THR3 1501 aa26.31■■□□□ 1.8
TARDBP-225ENST00000621715 KDM5AP29375 1690 aaKnown RBP26.3■■□□□ 1.8
TARDBP-225ENST00000621715 TET3O43151 1660 aa26.29■■□□□ 1.8
TARDBP-225ENST00000621715 EID1Q9Y6B2 187 aa26.28■■□□□ 1.8
TARDBP-225ENST00000621715 ANKRD30AQ9BXX3 1397 aa26.28■■□□□ 1.8
TARDBP-225ENST00000621715 NOS1P29475 1434 aa26.28■■□□□ 1.8
TARDBP-225ENST00000621715 KANK1Q14678 1352 aa26.27■■□□□ 1.8
TARDBP-225ENST00000621715 RBM33Q96EV2 1170 aaKnown RBP26.25■■□□□ 1.79
TARDBP-225ENST00000621715 PHF23Q9BUL5 403 aaPredicted RBP26.25■■□□□ 1.79
TARDBP-225ENST00000621715 APLP2Q06481 763 aa26.24■■□□□ 1.79
TARDBP-225ENST00000621715 RGS17Q9UGC6 210 aaPredicted RBP26.24■■□□□ 1.79
TARDBP-225ENST00000621715 ADGRB3O60242 1522 aa26.24■■□□□ 1.79
TARDBP-225ENST00000621715 ADGRL2O95490 1459 aa26.23■■□□□ 1.79
TARDBP-225ENST00000621715 SLC26A8Q96RN1 970 aa26.23■■□□□ 1.79
TARDBP-225ENST00000621715 STAG3Q9UJ98 1225 aa26.23■■□□□ 1.79
TARDBP-225ENST00000621715 TMEM94Q12767 1356 aa26.22■■□□□ 1.79
TARDBP-225ENST00000621715 MYO5BQ9ULV0 1848 aa26.22■■□□□ 1.79
TARDBP-225ENST00000621715 NWD1Q149M9 1564 aa26.17■■□□□ 1.78
TARDBP-225ENST00000621715 FAM135BQ49AJ0 1406 aa26.17■■□□□ 1.78
TARDBP-225ENST00000621715 KCNA6P17658 529 aa26.17■■□□□ 1.78
TARDBP-225ENST00000621715 ROBO1Q9Y6N7 1651 aa26.16■■□□□ 1.78
TARDBP-225ENST00000621715 ZFYVE9O95405 1425 aa26.14■■□□□ 1.77
TARDBP-225ENST00000621715 ANKRD50Q9ULJ7 1429 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms