RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 HNRNPMP52272 730 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTPDC1-204ENST00000620992 ANKRD50Q9ULJ7 1429 aa10.92□□□□□ -0.66
PTPDC1-204ENST00000620992 RAPGEF6Q8TEU7 1601 aa10.91□□□□□ -0.66
PTPDC1-204ENST00000620992 ST20-MTHFSA0A0A6YYL1 179 aa10.91□□□□□ -0.66
PTPDC1-204ENST00000620992 GRIN2AQ12879 1464 aa10.91□□□□□ -0.66
PTPDC1-204ENST00000620992 SPATA31E1Q6ZUB1 1445 aa10.91□□□□□ -0.66
PTPDC1-204ENST00000620992 NUDCQ9Y266 331 aa10.91□□□□□ -0.66
PTPDC1-204ENST00000620992 PZPP20742 1482 aa10.91□□□□□ -0.66
PTPDC1-204ENST00000620992 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
PTPDC1-204ENST00000620992 CYB5RLQ6IPT4 315 aa10.91□□□□□ -0.66
PTPDC1-204ENST00000620992 CC2D1BQ5T0F9 858 aaKnown RBP10.9□□□□□ -0.66
PTPDC1-204ENST00000620992 GPATCH8Q9UKJ3 1502 aaKnown RBP10.9□□□□□ -0.67
PTPDC1-204ENST00000620992 ANP32AP39687 249 aaKnown RBP10.89□□□□□ -0.67
PTPDC1-204ENST00000620992 U2SURPO15042 1029 aaKnown RBP10.89□□□□□ -0.67
PTPDC1-204ENST00000620992 KNSTRNQ9Y448 316 aa10.87□□□□□ -0.67
PTPDC1-204ENST00000620992 DHX29Q7Z478 1369 aaKnown RBP10.87□□□□□ -0.67
PTPDC1-204ENST00000620992 ROCK2O75116 1388 aaKnown RBP10.86□□□□□ -0.67
PTPDC1-204ENST00000620992 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.86□□□□□ -0.67
PTPDC1-204ENST00000620992 PNISRQ8TF01 805 aaKnown RBP10.86□□□□□ -0.67
PTPDC1-204ENST00000620992 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
PTPDC1-204ENST00000620992 NBR1Q14596 966 aa10.85□□□□□ -0.67
PTPDC1-204ENST00000620992 KIF14Q15058 1648 aa10.85□□□□□ -0.67
PTPDC1-204ENST00000620992 NPHP1O15259 732 aa10.85□□□□□ -0.67
PTPDC1-204ENST00000620992 C9orf84Q5VXU9 1444 aa10.85□□□□□ -0.67
PTPDC1-204ENST00000620992 KIF15Q9NS87 1388 aa10.84□□□□□ -0.67
PTPDC1-204ENST00000620992 SMG6Q86US8 1419 aaKnown RBP10.84□□□□□ -0.67
PTPDC1-204ENST00000620992 SRPK2P78362 688 aaKnown RBP10.84□□□□□ -0.67
PTPDC1-204ENST00000620992 PAK3O75914 559 aaPredicted RBP10.84□□□□□ -0.67
PTPDC1-204ENST00000620992 FRAT1Q92837 279 aaPredicted RBP10.83□□□□□ -0.68
PTPDC1-204ENST00000620992 EIF4G3O43432 1585 aaKnown RBP10.83□□□□□ -0.68
PTPDC1-204ENST00000620992 MYBBP1AQ9BQG0 1328 aaKnown RBP10.82□□□□□ -0.68
PTPDC1-204ENST00000620992 ITSN2Q9NZM3 1697 aa10.82□□□□□ -0.68
PTPDC1-204ENST00000620992 ZNF330Q9Y3S2 320 aaPredicted RBP10.82□□□□□ -0.68
PTPDC1-204ENST00000620992 NOP58Q9Y2X3 529 aaKnown RBP10.81□□□□□ -0.68
PTPDC1-204ENST00000620992 RALBP1Q15311 655 aa10.81□□□□□ -0.68
PTPDC1-204ENST00000620992 UPF2Q9HAU5 1272 aaKnown RBP10.81□□□□□ -0.68
PTPDC1-204ENST00000620992 BCORL1Q5H9F3 1711 aa10.81□□□□□ -0.68
PTPDC1-204ENST00000620992 SYNJ2O15056 1496 aa10.81□□□□□ -0.68
PTPDC1-204ENST00000620992 NBPF1Q3BBV0 1214 aa10.81□□□□□ -0.68
PTPDC1-204ENST00000620992 MAGI1Q96QZ7 1491 aaPredicted RBP10.8□□□□□ -0.68
PTPDC1-204ENST00000620992 ADGRL2O95490 1459 aa10.79□□□□□ -0.68
PTPDC1-204ENST00000620992 MBD5Q9P267 1494 aa10.79□□□□□ -0.68
PTPDC1-204ENST00000620992 CEP170Q5SW79 1584 aa10.79□□□□□ -0.68
PTPDC1-204ENST00000620992 KIF3BO15066 747 aa10.79□□□□□ -0.68
PTPDC1-204ENST00000620992 KTN1Q86UP2 1357 aaKnown RBP10.79□□□□□ -0.68
PTPDC1-204ENST00000620992 EFCAB2Q5VUJ9 269 aa10.78□□□□□ -0.68
PTPDC1-204ENST00000620992 RCAN3Q9UKA8 241 aa10.78□□□□□ -0.68
PTPDC1-204ENST00000620992 ADGBQ8N7X0 1667 aa10.78□□□□□ -0.68
PTPDC1-204ENST00000620992 NLRP13Q86W25 1043 aa10.78□□□□□ -0.68
PTPDC1-204ENST00000620992 EXOC6Q8TAG9 804 aa10.78□□□□□ -0.68
PTPDC1-204ENST00000620992 CCDC144AA2RUR9 1427 aa10.78□□□□□ -0.68
PTPDC1-204ENST00000620992 ATP10BO94823 1461 aa10.78□□□□□ -0.68
PTPDC1-204ENST00000620992 RALGAPBQ86X10 1494 aa10.78□□□□□ -0.68
PTPDC1-204ENST00000620992 KDM5CP41229 1560 aa10.77□□□□□ -0.69
PTPDC1-204ENST00000620992 PTPRGP23470 1445 aa10.77□□□□□ -0.69
PTPDC1-204ENST00000620992 OSCARQ8IYS5 282 aa10.77□□□□□ -0.69
PTPDC1-204ENST00000620992 CFAP53Q96M91 514 aa10.77□□□□□ -0.69
PTPDC1-204ENST00000620992 RRP1P56182 461 aaKnown RBP10.77□□□□□ -0.69
PTPDC1-204ENST00000620992 BRD4O60885 1362 aaPredicted RBP10.77□□□□□ -0.69
PTPDC1-204ENST00000620992 MYH16Q9H6N6 1097 aa10.76□□□□□ -0.69
PTPDC1-204ENST00000620992 RGS3P49796 1198 aa10.76□□□□□ -0.69
PTPDC1-204ENST00000620992 CDCA7LQ96GN5 454 aa10.76□□□□□ -0.69
PTPDC1-204ENST00000620992 CCDC9Q9Y3X0 531 aaKnown RBP10.76□□□□□ -0.69
PTPDC1-204ENST00000620992 POLR1AO95602 1720 aaPredicted RBP10.75□□□□□ -0.69
PTPDC1-204ENST00000620992 UHRF1BP1Q6BDS2 1440 aa10.75□□□□□ -0.69
PTPDC1-204ENST00000620992 PLIN1O60240 522 aa10.75□□□□□ -0.69
PTPDC1-204ENST00000620992 AMER1Q5JTC6 1135 aaPredicted RBP10.75□□□□□ -0.69
PTPDC1-204ENST00000620992 PANK3Q9H999 370 aa10.75□□□□□ -0.69
PTPDC1-204ENST00000620992 MAPK8IP3Q9UPT6 1336 aa10.74□□□□□ -0.69
PTPDC1-204ENST00000620992 APBB1O00213 710 aa10.74□□□□□ -0.69
PTPDC1-204ENST00000620992 DEKP35659 375 aaKnown RBP10.73□□□□□ -0.69
PTPDC1-204ENST00000620992 RNF123Q5XPI4 1314 aa10.73□□□□□ -0.69
PTPDC1-204ENST00000620992 TMF1P82094 1093 aa10.73□□□□□ -0.69
PTPDC1-204ENST00000620992 IPO9Q96P70 1041 aaKnown RBP10.73□□□□□ -0.69
PTPDC1-204ENST00000620992 RSPH4AQ5TD94 716 aa10.72□□□□□ -0.69
PTPDC1-204ENST00000620992 FTSJ3Q8IY81 847 aaKnown RBP10.72□□□□□ -0.69
PTPDC1-204ENST00000620992 LTV1Q96GA3 475 aaPredicted RBP10.72□□□□□ -0.69
PTPDC1-204ENST00000620992 CROCC2H7BZ55 1655 aa10.72□□□□□ -0.69
PTPDC1-204ENST00000620992 ABCC10Q5T3U5 1492 aa10.72□□□□□ -0.69
PTPDC1-204ENST00000620992 NUP160Q12769 1436 aa10.72□□□□□ -0.69
PTPDC1-204ENST00000620992 CDC42BPAQ5VT25 1732 aa10.72□□□□□ -0.69
PTPDC1-204ENST00000620992 CSB-PGBD3P0DP91 1061 aa10.71□□□□□ -0.69
PTPDC1-204ENST00000620992 ARHGEF12Q9NZN5 1544 aa10.71□□□□□ -0.69
PTPDC1-204ENST00000620992 CCDC141Q6ZP82 1450 aa10.71□□□□□ -0.69
PTPDC1-204ENST00000620992 SHANK2Q9UPX8 1470 aa10.71□□□□□ -0.69
PTPDC1-204ENST00000620992 LRPPRCP42704 1394 aaKnown RBP10.71□□□□□ -0.7
PTPDC1-204ENST00000620992 ADCY10Q96PN6 1610 aa10.7□□□□□ -0.7
PTPDC1-204ENST00000620992 KANK1Q14678 1352 aa10.7□□□□□ -0.7
PTPDC1-204ENST00000620992 EIF5BO60841 1220 aaKnown RBP10.7□□□□□ -0.7
PTPDC1-204ENST00000620992 FAM135AQ9P2D6 1515 aa10.7□□□□□ -0.7
PTPDC1-204ENST00000620992 PDE3BQ13370 1112 aa10.7□□□□□ -0.7
PTPDC1-204ENST00000620992 ARHGAP5Q13017 1502 aa10.69□□□□□ -0.7
PTPDC1-204ENST00000620992 PRAG1Q86YV5 1406 aa10.69□□□□□ -0.7
PTPDC1-204ENST00000620992 DISP3Q9P2K9 1392 aa10.69□□□□□ -0.7
PTPDC1-204ENST00000620992 CDCA8Q53HL2 280 aa10.69□□□□□ -0.7
PTPDC1-204ENST00000620992 ABCA8O94911 1581 aa10.68□□□□□ -0.7
PTPDC1-204ENST00000620992 PER1O15534 1290 aaPredicted RBP10.68□□□□□ -0.7
PTPDC1-204ENST00000620992 MORC1Q86VD1 984 aa10.68□□□□□ -0.7
PTPDC1-204ENST00000620992 SKAP1Q86WV1 359 aa10.68□□□□□ -0.7
PTPDC1-204ENST00000620992 PARD3Q8TEW0 1356 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms