RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 MIA2Q96PC5 1412 aa25.07■■□□□ 1.6
CD40-207ENST00000620709 FBXO31Q5XUX0 539 aaPredicted RBP25.06■■□□□ 1.6
CD40-207ENST00000620709 CEP170BQ9Y4F5 1589 aaPredicted RBP25.05■■□□□ 1.6
CD40-207ENST00000620709 KDM5DQ9BY66 1539 aa25.05■■□□□ 1.6
CD40-207ENST00000620709 ZNF142P52746 1687 aaPredicted RBP25.04■■□□□ 1.6
CD40-207ENST00000620709 MAST1Q9Y2H9 1570 aa25.03■■□□□ 1.6
CD40-207ENST00000620709 TNRQ92752 1358 aa24.99■■□□□ 1.59
CD40-207ENST00000620709 PTPN23Q9H3S7 1636 aa24.98■■□□□ 1.59
CD40-207ENST00000620709 PZPP20742 1482 aa24.98■■□□□ 1.59
CD40-207ENST00000620709 A2ML1A8K2U0 1454 aa24.96■■□□□ 1.59
CD40-207ENST00000620709 FAM135AQ9P2D6 1515 aa24.96■■□□□ 1.59
CD40-207ENST00000620709 PKD2Q13563 968 aa24.96■■□□□ 1.59
CD40-207ENST00000620709 PLA2R1Q13018 1463 aa24.94■■□□□ 1.58
CD40-207ENST00000620709 RRP7BPQ9NSQ0 103 aa24.94■■□□□ 1.58
CD40-207ENST00000620709 DNMT1P26358 1616 aaKnown RBP24.93■■□□□ 1.58
CD40-207ENST00000620709 RNF17Q9BXT8 1623 aaKnown RBP24.93■■□□□ 1.58
CD40-207ENST00000620709 ABCC5O15440 1437 aa24.92■■□□□ 1.58
CD40-207ENST00000620709 EIF2AK4Q9P2K8 1649 aaKnown RBP24.91■■□□□ 1.58
CD40-207ENST00000620709 DUOX2Q9NRD8 1548 aa24.91■■□□□ 1.58
CD40-207ENST00000620709 FGD6Q6ZV73 1430 aa24.91■■□□□ 1.58
CD40-207ENST00000620709 LTBP4Q8N2S1 1624 aa24.91■■□□□ 1.58
CD40-207ENST00000620709 CROCC2H7BZ55 1655 aa24.9■■□□□ 1.58
CD40-207ENST00000620709 KIF15Q9NS87 1388 aa24.9■■□□□ 1.58
CD40-207ENST00000620709 ZNF335Q9H4Z2 1342 aaPredicted RBP24.9■■□□□ 1.58
CD40-207ENST00000620709 ABCC3O15438 1527 aa24.9■■□□□ 1.58
CD40-207ENST00000620709 CHIC2Q9UKJ5 165 aa24.9■■□□□ 1.58
CD40-207ENST00000620709 TCOF1Q13428 1488 aaKnown RBP24.9■■□□□ 1.58
CD40-207ENST00000620709 DAPK1P53355 1430 aa24.88■■□□□ 1.57
CD40-207ENST00000620709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.87■■□□□ 1.57
CD40-207ENST00000620709 ZC3H13Q5T200 1668 aaKnown RBP24.87■■□□□ 1.57
CD40-207ENST00000620709 SHANK2Q9UPX8 1470 aa24.87■■□□□ 1.57
CD40-207ENST00000620709 CEP152O94986 1710 aa24.87■■□□□ 1.57
CD40-207ENST00000620709 CFAP65Q6ZU64 1925 aaKnown RBP24.85■■□□□ 1.57
CD40-207ENST00000620709 MROH1Q8NDA8 1641 aa24.85■■□□□ 1.57
CD40-207ENST00000620709 FAM50AQ14320 339 aaKnown RBP24.85■■□□□ 1.57
CD40-207ENST00000620709 THEMISQ8N1K5 641 aaPredicted RBP24.85■■□□□ 1.57
CD40-207ENST00000620709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.85■■□□□ 1.57
CD40-207ENST00000620709 NLRP1Q9C000 1473 aa24.83■■□□□ 1.57
CD40-207ENST00000620709 UGGT1Q9NYU2 1555 aa24.83■■□□□ 1.56
CD40-207ENST00000620709 POLR1AO95602 1720 aaPredicted RBP24.82■■□□□ 1.56
CD40-207ENST00000620709 ANKLE2Q86XL3 938 aa24.82■■□□□ 1.56
CD40-207ENST00000620709 ERBINQ96RT1 1412 aa24.81■■□□□ 1.56
CD40-207ENST00000620709 ANKRD30AQ9BXX3 1397 aa24.8■■□□□ 1.56
CD40-207ENST00000620709 ERVK-7P63135 1459 aa24.8■■□□□ 1.56
CD40-207ENST00000620709 SPATA31D1Q6ZQQ2 1576 aa24.78■■□□□ 1.56
CD40-207ENST00000620709 IQSEC2Q5JU85 1478 aa24.77■■□□□ 1.56
CD40-207ENST00000620709 NEURL4Q96JN8 1562 aa24.76■■□□□ 1.55
CD40-207ENST00000620709 KANK1Q14678 1352 aa24.76■■□□□ 1.55
CD40-207ENST00000620709 UBAP1LF5GYI3 381 aa24.75■■□□□ 1.55
CD40-207ENST00000620709 PRDM15P57071 1507 aaPredicted RBP24.74■■□□□ 1.55
CD40-207ENST00000620709 NPHP4O75161 1426 aaPredicted RBP24.71■■□□□ 1.55
CD40-207ENST00000620709 DEPDC5O75140 1603 aa24.7■■□□□ 1.54
CD40-207ENST00000620709 PPARGC1BQ86YN6 1023 aaKnown RBP24.68■■□□□ 1.54
CD40-207ENST00000620709 ARHGAP31Q2M1Z3 1444 aa24.67■■□□□ 1.54
CD40-207ENST00000620709 UBR1Q8IWV7 1749 aa24.66■■□□□ 1.54
CD40-207ENST00000620709 STAG3Q9UJ98 1225 aa24.66■■□□□ 1.54
CD40-207ENST00000620709 IQGAP1P46940 1657 aa24.65■■□□□ 1.54
CD40-207ENST00000620709 ADGRL2O95490 1459 aa24.64■■□□□ 1.54
CD40-207ENST00000620709 SCAF1Q9H7N4 1312 aaKnown RBP24.64■■□□□ 1.54
CD40-207ENST00000620709 MED14O60244 1454 aa24.64■■□□□ 1.53
CD40-207ENST00000620709 CPS1P31327 1500 aa24.63■■□□□ 1.53
CD40-207ENST00000620709 VWDEQ8N2E2 1590 aa24.61■■□□□ 1.53
CD40-207ENST00000620709 TXNDC2Q86VQ3 553 aa24.61■■□□□ 1.53
CD40-207ENST00000620709 ANKRD50Q9ULJ7 1429 aa24.6■■□□□ 1.53
CD40-207ENST00000620709 ITGAEP38570 1179 aa24.6■■□□□ 1.53
CD40-207ENST00000620709 PIK3C2BO00750 1634 aa24.59■■□□□ 1.53
CD40-207ENST00000620709 DISP3Q9P2K9 1392 aa24.59■■□□□ 1.53
CD40-207ENST00000620709 PIP4K2BP78356 416 aa24.59■■□□□ 1.53
CD40-207ENST00000620709 LMTK2Q8IWU2 1503 aa24.58■■□□□ 1.53
CD40-207ENST00000620709 EID1Q9Y6B2 187 aa24.58■■□□□ 1.53
CD40-207ENST00000620709 SCAF11Q99590 1463 aaKnown RBP24.58■■□□□ 1.53
CD40-207ENST00000620709 LTKP29376 864 aa24.57■■□□□ 1.52
CD40-207ENST00000620709 TOM1O60784 492 aa24.56■■□□□ 1.52
CD40-207ENST00000620709 IDI1Q13907 227 aa24.56■■□□□ 1.52
CD40-207ENST00000620709 EFCAB6Q5THR3 1501 aa24.54■■□□□ 1.52
CD40-207ENST00000620709 SLIT1O75093 1534 aa24.53■■□□□ 1.52
CD40-207ENST00000620709 ARHGAP23Q9P227 1491 aa24.52■■□□□ 1.52
CD40-207ENST00000620709 SYNMO15061 1565 aa24.52■■□□□ 1.52
CD40-207ENST00000620709 TMEM2Q9UHN6 1383 aa24.51■■□□□ 1.51
CD40-207ENST00000620709 STRCP1A6NGW2 1772 aa24.5■■□□□ 1.51
CD40-207ENST00000620709 NOS1P29475 1434 aa24.48■■□□□ 1.51
CD40-207ENST00000620709 SENP3Q9H4L4 574 aaPredicted RBP24.47■■□□□ 1.51
CD40-207ENST00000620709 BCANQ96GW7 911 aa24.46■■□□□ 1.51
CD40-207ENST00000620709 SLC52A1Q9NWF4 448 aa24.45■■□□□ 1.51
CD40-207ENST00000620709 ROCK1Q13464 1354 aa24.45■■□□□ 1.5
CD40-207ENST00000620709 LRRC7Q96NW7 1537 aa24.45■■□□□ 1.5
CD40-207ENST00000620709 TET3O43151 1660 aa24.45■■□□□ 1.5
CD40-207ENST00000620709 HSPA1LP34931 641 aa24.45■■□□□ 1.5
CD40-207ENST00000620709 ADGRB3O60242 1522 aa24.44■■□□□ 1.5
CD40-207ENST00000620709 UNC13BO14795 1591 aa24.43■■□□□ 1.5
CD40-207ENST00000620709 KDM5AP29375 1690 aaKnown RBP24.43■■□□□ 1.5
CD40-207ENST00000620709 RPRD2Q5VT52 1461 aaKnown RBP24.43■■□□□ 1.5
CD40-207ENST00000620709 CHGAP10645 457 aaKnown RBP24.42■■□□□ 1.5
CD40-207ENST00000620709 SLC26A8Q96RN1 970 aa24.41■■□□□ 1.5
CD40-207ENST00000620709 GCC2Q8IWJ2 1684 aa24.41■■□□□ 1.5
CD40-207ENST00000620709 ILDR2Q71H61 639 aa24.4■■□□□ 1.5
CD40-207ENST00000620709 NUP155O75694 1391 aa24.38■■□□□ 1.49
CD40-207ENST00000620709 PPP1R15AO75807 674 aaPredicted RBP24.37■■□□□ 1.49
CD40-207ENST00000620709 MYO5BQ9ULV0 1848 aa24.36■■□□□ 1.49
CD40-207ENST00000620709 E9PCH4 1651 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms