RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 MIA2Q96PC5 1412 aa17.88■□□□□ 0.45
LINC00649-218ENST00000620580 MYO3AQ8NEV4 1616 aa17.86■□□□□ 0.45
LINC00649-218ENST00000620580 CEP170BQ9Y4F5 1589 aaPredicted RBP17.84■□□□□ 0.45
LINC00649-218ENST00000620580 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.45
LINC00649-218ENST00000620580 KDM5DQ9BY66 1539 aa17.82■□□□□ 0.44
LINC00649-218ENST00000620580 TNRQ92752 1358 aa17.81■□□□□ 0.44
LINC00649-218ENST00000620580 ZNF142P52746 1687 aaPredicted RBP17.81■□□□□ 0.44
LINC00649-218ENST00000620580 PZPP20742 1482 aa17.81■□□□□ 0.44
LINC00649-218ENST00000620580 ABCC5O15440 1437 aa17.81■□□□□ 0.44
LINC00649-218ENST00000620580 A2ML1A8K2U0 1454 aa17.8■□□□□ 0.44
LINC00649-218ENST00000620580 LTBP4Q8N2S1 1624 aa17.8■□□□□ 0.44
LINC00649-218ENST00000620580 PKD2Q13563 968 aa17.79■□□□□ 0.44
LINC00649-218ENST00000620580 RRP7BPQ9NSQ0 103 aa17.79■□□□□ 0.44
LINC00649-218ENST00000620580 PTPN23Q9H3S7 1636 aa17.79■□□□□ 0.44
LINC00649-218ENST00000620580 PLA2R1Q13018 1463 aa17.78■□□□□ 0.44
LINC00649-218ENST00000620580 TCOF1Q13428 1488 aaKnown RBP17.78■□□□□ 0.44
LINC00649-218ENST00000620580 DNMT1P26358 1616 aaKnown RBP17.78■□□□□ 0.44
LINC00649-218ENST00000620580 ZNF335Q9H4Z2 1342 aaPredicted RBP17.77■□□□□ 0.44
LINC00649-218ENST00000620580 FGD6Q6ZV73 1430 aa17.77■□□□□ 0.44
LINC00649-218ENST00000620580 RNF17Q9BXT8 1623 aaKnown RBP17.76■□□□□ 0.43
LINC00649-218ENST00000620580 CHIC2Q9UKJ5 165 aa17.76■□□□□ 0.43
LINC00649-218ENST00000620580 ABCC3O15438 1527 aa17.76■□□□□ 0.43
LINC00649-218ENST00000620580 FAM135AQ9P2D6 1515 aa17.76■□□□□ 0.43
LINC00649-218ENST00000620580 KIF15Q9NS87 1388 aa17.76■□□□□ 0.43
LINC00649-218ENST00000620580 DAPK1P53355 1430 aa17.75■□□□□ 0.43
LINC00649-218ENST00000620580 DUOX2Q9NRD8 1548 aa17.74■□□□□ 0.43
LINC00649-218ENST00000620580 MROH1Q8NDA8 1641 aa17.74■□□□□ 0.43
LINC00649-218ENST00000620580 CFAP65Q6ZU64 1925 aaKnown RBP17.73■□□□□ 0.43
LINC00649-218ENST00000620580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.73■□□□□ 0.43
LINC00649-218ENST00000620580 EIF2AK4Q9P2K8 1649 aaKnown RBP17.72■□□□□ 0.43
LINC00649-218ENST00000620580 SHANK2Q9UPX8 1470 aa17.72■□□□□ 0.43
LINC00649-218ENST00000620580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.72■□□□□ 0.43
LINC00649-218ENST00000620580 CROCC2H7BZ55 1655 aa17.71■□□□□ 0.43
LINC00649-218ENST00000620580 CEP152O94986 1710 aa17.7■□□□□ 0.42
LINC00649-218ENST00000620580 THEMISQ8N1K5 641 aaPredicted RBP17.7■□□□□ 0.42
LINC00649-218ENST00000620580 FAM50AQ14320 339 aaKnown RBP17.69■□□□□ 0.42
LINC00649-218ENST00000620580 ERVK-7P63135 1459 aa17.69■□□□□ 0.42
LINC00649-218ENST00000620580 NLRP1Q9C000 1473 aa17.69■□□□□ 0.42
LINC00649-218ENST00000620580 ANKLE2Q86XL3 938 aa17.68■□□□□ 0.42
LINC00649-218ENST00000620580 ZC3H13Q5T200 1668 aaKnown RBP17.67■□□□□ 0.42
LINC00649-218ENST00000620580 SPATA31D1Q6ZQQ2 1576 aa17.67■□□□□ 0.42
LINC00649-218ENST00000620580 NEURL4Q96JN8 1562 aa17.67■□□□□ 0.42
LINC00649-218ENST00000620580 UGGT1Q9NYU2 1555 aa17.67■□□□□ 0.42
LINC00649-218ENST00000620580 ERBINQ96RT1 1412 aa17.67■□□□□ 0.42
LINC00649-218ENST00000620580 ANKRD30AQ9BXX3 1397 aa17.66■□□□□ 0.42
LINC00649-218ENST00000620580 POLR1AO95602 1720 aaPredicted RBP17.64■□□□□ 0.41
LINC00649-218ENST00000620580 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
LINC00649-218ENST00000620580 IQSEC2Q5JU85 1478 aa17.63■□□□□ 0.41
LINC00649-218ENST00000620580 PRDM15P57071 1507 aaPredicted RBP17.63■□□□□ 0.41
LINC00649-218ENST00000620580 UBAP1LF5GYI3 381 aa17.62■□□□□ 0.41
LINC00649-218ENST00000620580 NPHP4O75161 1426 aaPredicted RBP17.61■□□□□ 0.41
LINC00649-218ENST00000620580 ARHGAP31Q2M1Z3 1444 aa17.61■□□□□ 0.41
LINC00649-218ENST00000620580 DEPDC5O75140 1603 aa17.6■□□□□ 0.41
LINC00649-218ENST00000620580 KANK1Q14678 1352 aa17.59■□□□□ 0.41
LINC00649-218ENST00000620580 MED14O60244 1454 aa17.58■□□□□ 0.41
LINC00649-218ENST00000620580 ADGRL2O95490 1459 aa17.58■□□□□ 0.41
LINC00649-218ENST00000620580 LTKP29376 864 aa17.58■□□□□ 0.4
LINC00649-218ENST00000620580 VWDEQ8N2E2 1590 aa17.57■□□□□ 0.4
LINC00649-218ENST00000620580 UBR1Q8IWV7 1749 aa17.56■□□□□ 0.4
LINC00649-218ENST00000620580 IDI1Q13907 227 aa17.55■□□□□ 0.4
LINC00649-218ENST00000620580 TXNDC2Q86VQ3 553 aa17.55■□□□□ 0.4
LINC00649-218ENST00000620580 ANKRD50Q9ULJ7 1429 aa17.55■□□□□ 0.4
LINC00649-218ENST00000620580 LMTK2Q8IWU2 1503 aa17.54■□□□□ 0.4
LINC00649-218ENST00000620580 IQGAP1P46940 1657 aa17.54■□□□□ 0.4
LINC00649-218ENST00000620580 CPS1P31327 1500 aa17.52■□□□□ 0.4
LINC00649-218ENST00000620580 ITGAEP38570 1179 aa17.52■□□□□ 0.4
LINC00649-218ENST00000620580 STAG3Q9UJ98 1225 aa17.52■□□□□ 0.4
LINC00649-218ENST00000620580 SCAF11Q99590 1463 aaKnown RBP17.51■□□□□ 0.39
LINC00649-218ENST00000620580 ARHGAP23Q9P227 1491 aa17.51■□□□□ 0.39
LINC00649-218ENST00000620580 PIK3C2BO00750 1634 aa17.51■□□□□ 0.39
LINC00649-218ENST00000620580 PIP4K2BP78356 416 aa17.51■□□□□ 0.39
LINC00649-218ENST00000620580 SLIT1O75093 1534 aa17.5■□□□□ 0.39
LINC00649-218ENST00000620580 STRCP1A6NGW2 1772 aa17.5■□□□□ 0.39
LINC00649-218ENST00000620580 DISP3Q9P2K9 1392 aa17.5■□□□□ 0.39
LINC00649-218ENST00000620580 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
LINC00649-218ENST00000620580 SYNMO15061 1565 aa17.49■□□□□ 0.39
LINC00649-218ENST00000620580 NOS1P29475 1434 aa17.49■□□□□ 0.39
LINC00649-218ENST00000620580 EFCAB6Q5THR3 1501 aa17.49■□□□□ 0.39
LINC00649-218ENST00000620580 TMEM2Q9UHN6 1383 aa17.49■□□□□ 0.39
LINC00649-218ENST00000620580 EID1Q9Y6B2 187 aa17.48■□□□□ 0.39
LINC00649-218ENST00000620580 TOM1O60784 492 aa17.47■□□□□ 0.39
LINC00649-218ENST00000620580 ILDR2Q71H61 639 aa17.46■□□□□ 0.39
LINC00649-218ENST00000620580 HSPA1LP34931 641 aa17.45■□□□□ 0.38
LINC00649-218ENST00000620580 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
LINC00649-218ENST00000620580 LRRC7Q96NW7 1537 aa17.45■□□□□ 0.38
LINC00649-218ENST00000620580 ROCK1Q13464 1354 aa17.44■□□□□ 0.38
LINC00649-218ENST00000620580 SLC52A1Q9NWF4 448 aa17.44■□□□□ 0.38
LINC00649-218ENST00000620580 ALKQ9UM73 1620 aa17.43■□□□□ 0.38
LINC00649-218ENST00000620580 SLC26A8Q96RN1 970 aa17.42■□□□□ 0.38
LINC00649-218ENST00000620580 UNC13BO14795 1591 aa17.4■□□□□ 0.38
LINC00649-218ENST00000620580 TET3O43151 1660 aa17.4■□□□□ 0.38
LINC00649-218ENST00000620580 RPRD2Q5VT52 1461 aaKnown RBP17.4■□□□□ 0.38
LINC00649-218ENST00000620580 ADGRB3O60242 1522 aa17.4■□□□□ 0.38
LINC00649-218ENST00000620580 NUP155O75694 1391 aa17.39■□□□□ 0.37
LINC00649-218ENST00000620580 KDM5AP29375 1690 aaKnown RBP17.39■□□□□ 0.37
LINC00649-218ENST00000620580 CHGAP10645 457 aaKnown RBP17.38■□□□□ 0.37
LINC00649-218ENST00000620580 RBM33Q96EV2 1170 aaKnown RBP17.37■□□□□ 0.37
LINC00649-218ENST00000620580 BCANQ96GW7 911 aa17.37■□□□□ 0.37
LINC00649-218ENST00000620580 MYO5BQ9ULV0 1848 aa17.37■□□□□ 0.37
LINC00649-218ENST00000620580 E9PCH4 1651 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms