RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 KDM6BO15054 1643 aa10.47□□□□□ -0.73
BRCC3-209ENST00000620502 TEX14Q8IWB6 1497 aa10.46□□□□□ -0.74
BRCC3-209ENST00000620502 FYCO1Q9BQS8 1478 aa10.46□□□□□ -0.74
BRCC3-209ENST00000620502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.45□□□□□ -0.74
BRCC3-209ENST00000620502 COL17A1Q9UMD9 1497 aaPredicted RBP10.45□□□□□ -0.74
BRCC3-209ENST00000620502 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.45□□□□□ -0.74
BRCC3-209ENST00000620502 ZFP91Q96JP5 570 aaPredicted RBP10.45□□□□□ -0.74
BRCC3-209ENST00000620502 TAOK2Q9UL54 1235 aa10.45□□□□□ -0.74
BRCC3-209ENST00000620502 TRIM35Q9UPQ4 493 aa10.45□□□□□ -0.74
BRCC3-209ENST00000620502 CCDC18Q5T9S5 1454 aa10.44□□□□□ -0.74
BRCC3-209ENST00000620502 TTC37Q6PGP7 1564 aa10.43□□□□□ -0.74
BRCC3-209ENST00000620502 CDK11AQ9UQ88 783 aaPredicted RBP10.43□□□□□ -0.74
BRCC3-209ENST00000620502 TROQ12816 1431 aaPredicted RBP10.42□□□□□ -0.74
BRCC3-209ENST00000620502 KIF14Q15058 1648 aa10.42□□□□□ -0.74
BRCC3-209ENST00000620502 ARAP3Q8WWN8 1544 aa10.4□□□□□ -0.74
BRCC3-209ENST00000620502 NEO1Q92859 1461 aa10.39□□□□□ -0.75
BRCC3-209ENST00000620502 SLC39A7Q92504 469 aa10.39□□□□□ -0.75
BRCC3-209ENST00000620502 PLCH2O75038 1416 aa10.39□□□□□ -0.75
BRCC3-209ENST00000620502 PHLDB1Q86UU1 1377 aa10.39□□□□□ -0.75
BRCC3-209ENST00000620502 VPS8Q8N3P4 1428 aa10.38□□□□□ -0.75
BRCC3-209ENST00000620502 MYO5CQ9NQX4 1742 aa10.38□□□□□ -0.75
BRCC3-209ENST00000620502 STK25O00506 426 aa10.37□□□□□ -0.75
BRCC3-209ENST00000620502 C7P10643 843 aa10.37□□□□□ -0.75
BRCC3-209ENST00000620502 IER5LQ5T953 404 aa10.37□□□□□ -0.75
BRCC3-209ENST00000620502 BCL11BQ9C0K0 894 aaPredicted RBP10.37□□□□□ -0.75
BRCC3-209ENST00000620502 CABP2Q9NPB3 220 aa10.37□□□□□ -0.75
BRCC3-209ENST00000620502 FANCAO15360 1455 aa10.36□□□□□ -0.75
BRCC3-209ENST00000620502 AKNAQ7Z591 1439 aa10.36□□□□□ -0.75
BRCC3-209ENST00000620502 CDC42BPBQ9Y5S2 1711 aa10.36□□□□□ -0.75
BRCC3-209ENST00000620502 CFAP74Q9C0B2 1584 aa10.35□□□□□ -0.75
BRCC3-209ENST00000620502 HS6ST3Q8IZP7 471 aa10.35□□□□□ -0.75
BRCC3-209ENST00000620502 METRNQ9UJH8 293 aa10.35□□□□□ -0.75
BRCC3-209ENST00000620502 STK24Q9Y6E0 443 aa10.35□□□□□ -0.75
BRCC3-209ENST00000620502 CDC42BPAQ5VT25 1732 aa10.34□□□□□ -0.75
BRCC3-209ENST00000620502 RAPGEF3O95398 923 aa10.34□□□□□ -0.75
BRCC3-209ENST00000620502 GOLGA2Q08379 1002 aa10.34□□□□□ -0.75
BRCC3-209ENST00000620502 TIAM1Q13009 1591 aa10.34□□□□□ -0.75
BRCC3-209ENST00000620502 FRMPD1Q5SYB0 1578 aa10.34□□□□□ -0.75
BRCC3-209ENST00000620502 PREX2Q70Z35 1606 aa10.33□□□□□ -0.76
BRCC3-209ENST00000620502 RICTORQ6R327 1708 aa10.33□□□□□ -0.76
BRCC3-209ENST00000620502 POTEFA5A3E0 1075 aa10.33□□□□□ -0.76
BRCC3-209ENST00000620502 EFCAB2Q5VUJ9 269 aa10.33□□□□□ -0.76
BRCC3-209ENST00000620502 MTUS2Q5JR59 1369 aa10.32□□□□□ -0.76
BRCC3-209ENST00000620502 CHGAP10645 457 aaKnown RBP10.32□□□□□ -0.76
BRCC3-209ENST00000620502 IRX5P78411 483 aaPredicted RBP10.32□□□□□ -0.76
BRCC3-209ENST00000620502 MKRN3Q13064 507 aaKnown RBP10.32□□□□□ -0.76
BRCC3-209ENST00000620502 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
BRCC3-209ENST00000620502 EHBP1L1Q8N3D4 1523 aa10.32□□□□□ -0.76
BRCC3-209ENST00000620502 DENND4BO75064 1496 aaPredicted RBP10.31□□□□□ -0.76
BRCC3-209ENST00000620502 COLQQ9Y215 455 aaPredicted RBP10.31□□□□□ -0.76
BRCC3-209ENST00000620502 ARHGAP5Q13017 1502 aa10.31□□□□□ -0.76
BRCC3-209ENST00000620502 MAP3K1Q13233 1512 aa10.31□□□□□ -0.76
BRCC3-209ENST00000620502 GPATCH8Q9UKJ3 1502 aaKnown RBP10.31□□□□□ -0.76
BRCC3-209ENST00000620502 SCAPERQ9BY12 1400 aa10.31□□□□□ -0.76
BRCC3-209ENST00000620502 ADGRL1O94910 1474 aa10.3□□□□□ -0.76
BRCC3-209ENST00000620502 ILDR1Q86SU0 546 aaPredicted RBP10.3□□□□□ -0.76
BRCC3-209ENST00000620502 LRRC9Q6ZRR7 1453 aa10.3□□□□□ -0.76
BRCC3-209ENST00000620502 KANK4Q5T7N3 995 aaPredicted RBP10.29□□□□□ -0.76
BRCC3-209ENST00000620502 SUPT6HQ7KZ85 1726 aaKnown RBP10.28□□□□□ -0.76
BRCC3-209ENST00000620502 ARHGEF12Q9NZN5 1544 aa10.28□□□□□ -0.76
BRCC3-209ENST00000620502 CCNB3Q8WWL7 1395 aa10.27□□□□□ -0.76
BRCC3-209ENST00000620502 SAMD9LQ8IVG5 1584 aa10.27□□□□□ -0.76
BRCC3-209ENST00000620502 POGZQ7Z3K3 1410 aa10.27□□□□□ -0.77
BRCC3-209ENST00000620502 SOX12O15370 315 aa10.27□□□□□ -0.77
BRCC3-209ENST00000620502 SEC24BO95487 1268 aa10.27□□□□□ -0.77
BRCC3-209ENST00000620502 OCEL1Q9H607 264 aa10.27□□□□□ -0.77
BRCC3-209ENST00000620502 NCOA2Q15596 1464 aa10.27□□□□□ -0.77
BRCC3-209ENST00000620502 ABCC1P33527 1531 aa10.27□□□□□ -0.77
BRCC3-209ENST00000620502 ZMYM4Q5VZL5 1548 aa10.27□□□□□ -0.77
BRCC3-209ENST00000620502 ITSN2Q9NZM3 1697 aa10.26□□□□□ -0.77
BRCC3-209ENST00000620502 KDM4FA0A1W2PPD8 638 aa10.26□□□□□ -0.77
BRCC3-209ENST00000620502 POTEB2H3BUK9 544 aa10.25□□□□□ -0.77
BRCC3-209ENST00000620502 AFAP1Q8N556 730 aa10.25□□□□□ -0.77
BRCC3-209ENST00000620502 PDCD7Q8N8D1 485 aaKnown RBP10.25□□□□□ -0.77
BRCC3-209ENST00000620502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.25□□□□□ -0.77
BRCC3-209ENST00000620502 CFDP1Q9UEE9 299 aaPredicted RBP10.25□□□□□ -0.77
BRCC3-209ENST00000620502 ZNF777Q9ULD5 760 aaPredicted RBP10.25□□□□□ -0.77
BRCC3-209ENST00000620502 TRAPPC8Q9Y2L5 1435 aa10.24□□□□□ -0.77
BRCC3-209ENST00000620502 ZNF518AQ6AHZ1 1483 aa10.24□□□□□ -0.77
BRCC3-209ENST00000620502 MAGI2Q86UL8 1455 aa10.24□□□□□ -0.77
BRCC3-209ENST00000620502 KDM5CP41229 1560 aa10.24□□□□□ -0.77
BRCC3-209ENST00000620502 PLCG2P16885 1265 aa10.24□□□□□ -0.77
BRCC3-209ENST00000620502 YEATS2Q9ULM3 1422 aa10.24□□□□□ -0.77
BRCC3-209ENST00000620502 ARHGEF40Q8TER5 1519 aa10.23□□□□□ -0.77
BRCC3-209ENST00000620502 HNRNPMP52272 730 aaKnown RBP eCLIP10.23□□□□□ -0.77
BRCC3-209ENST00000620502 MFRPQ9BY79 579 aa10.23□□□□□ -0.77
BRCC3-209ENST00000620502 ZNF644Q9H582 1327 aaPredicted RBP10.23□□□□□ -0.77
BRCC3-209ENST00000620502 ZFYVE16Q7Z3T8 1539 aa10.23□□□□□ -0.77
BRCC3-209ENST00000620502 SIGLEC1Q9BZZ2 1709 aa10.22□□□□□ -0.77
BRCC3-209ENST00000620502 PHF8Q9UPP1 1060 aa10.22□□□□□ -0.77
BRCC3-209ENST00000620502 KIAA1107Q9UPP5 1409 aa10.22□□□□□ -0.77
BRCC3-209ENST00000620502 SYCP2Q9BX26 1530 aa10.22□□□□□ -0.77
BRCC3-209ENST00000620502 NKX1-1Q15270 411 aaPredicted RBP10.21□□□□□ -0.77
BRCC3-209ENST00000620502 LHX8Q68G74 356 aa10.21□□□□□ -0.77
BRCC3-209ENST00000620502 FBXO22Q8NEZ5 403 aa10.21□□□□□ -0.77
BRCC3-209ENST00000620502 PLEKHH2Q8IVE3 1493 aa10.21□□□□□ -0.78
BRCC3-209ENST00000620502 MLH3Q9UHC1 1453 aa10.21□□□□□ -0.78
BRCC3-209ENST00000620502 ATP10AO60312 1499 aa10.2□□□□□ -0.78
BRCC3-209ENST00000620502 POTEJP0CG39 1038 aa10.2□□□□□ -0.78
BRCC3-209ENST00000620502 MS4A4AQ96JQ5 239 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms