RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 KIF6Q6ZMV9 814 aa5.81□□□□□ -1.48
CHL1-216ENST00000620033 CCDC43Q96MW1 224 aaKnown RBP5.81□□□□□ -1.48
CHL1-216ENST00000620033 GOLGA3Q08378 1498 aa5.81□□□□□ -1.48
CHL1-216ENST00000620033 FAM177BA6PVY3 158 aa5.8□□□□□ -1.48
CHL1-216ENST00000620033 ABCC8Q09428 1581 aa5.8□□□□□ -1.48
CHL1-216ENST00000620033 EIF3AQ14152 1382 aaKnown RBP5.8□□□□□ -1.48
CHL1-216ENST00000620033 LMOD1P29536 600 aaPredicted RBP5.8□□□□□ -1.48
CHL1-216ENST00000620033 IKQ13123 557 aaPredicted RBP5.8□□□□□ -1.48
CHL1-216ENST00000620033 CARMIL1Q5VZK9 1371 aa5.8□□□□□ -1.48
CHL1-216ENST00000620033 DHX16O60231 1041 aaKnown RBP5.8□□□□□ -1.48
CHL1-216ENST00000620033 ZNF219Q9P2Y4 722 aaPredicted RBP5.8□□□□□ -1.48
CHL1-216ENST00000620033 FANCD2Q9BXW9 1451 aa5.8□□□□□ -1.48
CHL1-216ENST00000620033 NUTM2GQ5VZR2 741 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 TMF1P82094 1093 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 FAM9BQ8IZU0 186 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 GPATCH3Q96I76 525 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 CHMP4BQ9H444 224 aaKnown RBP5.79□□□□□ -1.48
CHL1-216ENST00000620033 WWC1Q8IX03 1113 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 BAZ1AQ9NRL2 1556 aaPredicted RBP5.79□□□□□ -1.48
CHL1-216ENST00000620033 CC2D2AQ9P2K1 1620 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 APBB1O00213 710 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 DDX54Q8TDD1 881 aaKnown RBP5.79□□□□□ -1.48
CHL1-216ENST00000620033 DCAF11Q8TEB1 546 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 VTI1AQ96AJ9 217 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 STK31Q9BXU1 1019 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 MPHOSPH10O00566 681 aaKnown RBP5.79□□□□□ -1.48
CHL1-216ENST00000620033 ZPR1O75312 459 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 PAF1Q8N7H5 531 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 COG3Q96JB2 828 aa5.79□□□□□ -1.48
CHL1-216ENST00000620033 MRC2Q9UBG0 1479 aa5.78□□□□□ -1.48
CHL1-216ENST00000620033 HSP90B1P14625 803 aaKnown RBP5.78□□□□□ -1.48
CHL1-216ENST00000620033 R3HCC1Q9Y3T6 440 aaKnown RBP5.78□□□□□ -1.48
CHL1-216ENST00000620033 SMG6Q86US8 1419 aaKnown RBP5.78□□□□□ -1.48
CHL1-216ENST00000620033 PMFBP1Q8TBY8 1022 aa5.78□□□□□ -1.48
CHL1-216ENST00000620033 AK7Q96M32 723 aa5.78□□□□□ -1.48
CHL1-216ENST00000620033 BCL2L13Q9BXK5 485 aa5.78□□□□□ -1.48
CHL1-216ENST00000620033 BAG6P46379 1132 aa5.78□□□□□ -1.48
CHL1-216ENST00000620033 KIAA2012Q0VF49 1180 aa5.78□□□□□ -1.48
CHL1-216ENST00000620033 STAC3Q96MF2 364 aa5.78□□□□□ -1.48
CHL1-216ENST00000620033 STK32BQ9NY57 414 aa5.78□□□□□ -1.48
CHL1-216ENST00000620033 PDE4CQ08493 712 aa5.78□□□□□ -1.48
CHL1-216ENST00000620033 TEFQ10587 303 aa5.78□□□□□ -1.48
CHL1-216ENST00000620033 RASSF8Q8NHQ8 419 aa5.78□□□□□ -1.48
CHL1-216ENST00000620033 CHMP4BP1P59074 171 aa5.77□□□□□ -1.49
CHL1-216ENST00000620033 HDAC5Q9UQL6 1122 aa5.77□□□□□ -1.49
CHL1-216ENST00000620033 CALD1Q05682 793 aaKnown RBP5.77□□□□□ -1.49
CHL1-216ENST00000620033 VSIG10Q8N0Z9 540 aa5.77□□□□□ -1.49
CHL1-216ENST00000620033 CC2D1BQ5T0F9 858 aaKnown RBP5.77□□□□□ -1.49
CHL1-216ENST00000620033 CADPSQ9ULU8 1353 aa5.77□□□□□ -1.49
CHL1-216ENST00000620033 PRDM11Q9NQV5 511 aa5.77□□□□□ -1.49
CHL1-216ENST00000620033 VGFO15240 615 aaPredicted RBP5.76□□□□□ -1.49
CHL1-216ENST00000620033 NF2P35240 595 aa5.76□□□□□ -1.49
CHL1-216ENST00000620033 BICDL1Q6ZP65 573 aa5.76□□□□□ -1.49
CHL1-216ENST00000620033 ZNF526Q8TF50 670 aaPredicted RBP5.76□□□□□ -1.49
CHL1-216ENST00000620033 EIF5BO60841 1220 aaKnown RBP5.76□□□□□ -1.49
CHL1-216ENST00000620033 PHF14O94880 888 aa5.76□□□□□ -1.49
CHL1-216ENST00000620033 SMC4Q9NTJ3 1288 aa5.76□□□□□ -1.49
CHL1-216ENST00000620033 TCERG1O14776 1098 aaKnown RBP5.76□□□□□ -1.49
CHL1-216ENST00000620033 TMOD2Q9NZR1 351 aa5.76□□□□□ -1.49
CHL1-216ENST00000620033 MSH6P52701 1360 aa5.76□□□□□ -1.49
CHL1-216ENST00000620033 CCDC27Q2M243 656 aa5.75□□□□□ -1.49
CHL1-216ENST00000620033 ABTB2Q8N961 1025 aa5.75□□□□□ -1.49
CHL1-216ENST00000620033 FYB1O15117 783 aa5.75□□□□□ -1.49
CHL1-216ENST00000620033 ZNF622Q969S3 477 aaKnown RBP eCLIP5.75□□□□□ -1.49
CHL1-216ENST00000620033 LRPPRCP42704 1394 aaKnown RBP5.75□□□□□ -1.49
CHL1-216ENST00000620033 CEP162Q5TB80 1403 aa5.75□□□□□ -1.49
CHL1-216ENST00000620033 UACAQ9BZF9 1416 aa5.75□□□□□ -1.49
CHL1-216ENST00000620033 WDR78Q5VTH9 848 aa5.75□□□□□ -1.49
CHL1-216ENST00000620033 KCNA4P22459 653 aa5.74□□□□□ -1.49
CHL1-216ENST00000620033 NEXNQ0ZGT2 675 aa5.74□□□□□ -1.49
CHL1-216ENST00000620033 RSPH4AQ5TD94 716 aa5.74□□□□□ -1.49
CHL1-216ENST00000620033 TATP17735 454 aaPredicted RBP5.74□□□□□ -1.49
CHL1-216ENST00000620033 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.74□□□□□ -1.49
CHL1-216ENST00000620033 ANKRD30AQ9BXX3 1397 aa5.74□□□□□ -1.49
CHL1-216ENST00000620033 ZNF772Q68DY9 489 aaPredicted RBP5.74□□□□□ -1.49
CHL1-216ENST00000620033 ARHGAP5Q13017 1502 aa5.73□□□□□ -1.49
CHL1-216ENST00000620033 ZSCAN29Q8IWY8 852 aaPredicted RBP5.73□□□□□ -1.49
CHL1-216ENST00000620033 FBXO3Q9UK99 471 aa5.73□□□□□ -1.49
CHL1-216ENST00000620033 FHAD1B1AJZ9 1412 aa5.73□□□□□ -1.49
CHL1-216ENST00000620033 WWC3Q9ULE0 1092 aa5.73□□□□□ -1.49
CHL1-216ENST00000620033 RXRBP28702 533 aa5.73□□□□□ -1.49
CHL1-216ENST00000620033 TRIM44Q96DX7 344 aaPredicted RBP5.73□□□□□ -1.49
CHL1-216ENST00000620033 EP400NLQ6ZTU2 488 aa5.73□□□□□ -1.49
CHL1-216ENST00000620033 ZNF408Q9H9D4 720 aa5.73□□□□□ -1.49
CHL1-216ENST00000620033 RPGRQ92834 1020 aaKnown RBP5.73□□□□□ -1.49
CHL1-216ENST00000620033 CEP89Q96ST8 783 aa5.73□□□□□ -1.49
CHL1-216ENST00000620033 CABP4P57796 275 aa5.72□□□□□ -1.49
CHL1-216ENST00000620033 L1TD1Q5T7N2 865 aaKnown RBP5.72□□□□□ -1.49
CHL1-216ENST00000620033 HDAC9Q9UKV0 1011 aa5.72□□□□□ -1.49
CHL1-216ENST00000620033 TRAK1Q9UPV9 953 aa5.72□□□□□ -1.49
CHL1-216ENST00000620033 CHAF1AQ13111 956 aaPredicted RBP5.72□□□□□ -1.49
CHL1-216ENST00000620033 XPCQ01831 940 aaPredicted RBP5.72□□□□□ -1.49
CHL1-216ENST00000620033 EAPPQ56P03 285 aaPredicted RBP5.72□□□□□ -1.49
CHL1-216ENST00000620033 NOL8Q76FK4 1167 aaKnown RBP5.72□□□□□ -1.49
CHL1-216ENST00000620033 EEA1Q15075 1411 aa5.72□□□□□ -1.49
CHL1-216ENST00000620033 PLIN1O60240 522 aa5.72□□□□□ -1.49
CHL1-216ENST00000620033 CCDC18Q5T9S5 1454 aa5.72□□□□□ -1.49
CHL1-216ENST00000620033 HIRIP3Q9BW71 556 aaPredicted RBP5.72□□□□□ -1.49
CHL1-216ENST00000620033 ST5P78524 1137 aa5.71□□□□□ -1.49
CHL1-216ENST00000620033 KIAA1211Q6ZU35 1233 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms