RNA–Protein interactions for RNA: ENST00000619554.1

NBPF3-213, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 1,831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-213ENST00000619554 SETD5Q9C0A6 1442 aa15.53■□□□□ 0.08
NBPF3-213ENST00000619554 AGLP35573 1532 aa15.53■□□□□ 0.08
NBPF3-213ENST00000619554 TRIM52Q96A61 297 aa15.52■□□□□ 0.07
NBPF3-213ENST00000619554 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.07
NBPF3-213ENST00000619554 WASHC2CQ9Y4E1 1318 aa15.51■□□□□ 0.07
NBPF3-213ENST00000619554 KANK1Q14678 1352 aa15.51■□□□□ 0.07
NBPF3-213ENST00000619554 CCER1Q8TC90 406 aaPredicted RBP15.5■□□□□ 0.07
NBPF3-213ENST00000619554 NUP155O75694 1391 aa15.47■□□□□ 0.07
NBPF3-213ENST00000619554 RAB3GAP2Q9H2M9 1393 aa15.46■□□□□ 0.07
NBPF3-213ENST00000619554 EIF2AK4Q9P2K8 1649 aaKnown RBP15.45■□□□□ 0.06
NBPF3-213ENST00000619554 CNTLNQ9NXG0 1405 aa15.43■□□□□ 0.06
NBPF3-213ENST00000619554 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
NBPF3-213ENST00000619554 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
NBPF3-213ENST00000619554 GCC2Q8IWJ2 1684 aa15.4■□□□□ 0.06
NBPF3-213ENST00000619554 KDM4FA0A1W2PPD8 638 aa15.4■□□□□ 0.06
NBPF3-213ENST00000619554 BCORL1Q5H9F3 1711 aa15.39■□□□□ 0.05
NBPF3-213ENST00000619554 SIGLEC1Q9BZZ2 1709 aa15.39■□□□□ 0.05
NBPF3-213ENST00000619554 ZMYM3Q14202 1370 aa15.39■□□□□ 0.05
NBPF3-213ENST00000619554 RNF17Q9BXT8 1623 aaKnown RBP15.38■□□□□ 0.05
NBPF3-213ENST00000619554 PRDM15P57071 1507 aaPredicted RBP15.38■□□□□ 0.05
NBPF3-213ENST00000619554 KDM5DQ9BY66 1539 aa15.38■□□□□ 0.05
NBPF3-213ENST00000619554 MPHOSPH9Q99550 1183 aa15.38■□□□□ 0.05
NBPF3-213ENST00000619554 FAM135AQ9P2D6 1515 aa15.37■□□□□ 0.05
NBPF3-213ENST00000619554 PKD2Q13563 968 aa15.36■□□□□ 0.05
NBPF3-213ENST00000619554 ABCC3O15438 1527 aa15.35■□□□□ 0.05
NBPF3-213ENST00000619554 CEBPAP49715 358 aaPredicted RBP15.35■□□□□ 0.05
NBPF3-213ENST00000619554 DIEXFQ68CQ4 756 aaKnown RBP15.34■□□□□ 0.05
NBPF3-213ENST00000619554 UNC13BO14795 1591 aa15.34■□□□□ 0.05
NBPF3-213ENST00000619554 DEPDC5O75140 1603 aa15.34■□□□□ 0.05
NBPF3-213ENST00000619554 CENPBP07199 599 aaPredicted RBP15.33■□□□□ 0.05
NBPF3-213ENST00000619554 MROH1Q8NDA8 1641 aa15.33■□□□□ 0.04
NBPF3-213ENST00000619554 LMTK2Q8IWU2 1503 aa15.33■□□□□ 0.04
NBPF3-213ENST00000619554 ADAMTSL3P82987 1691 aa15.32■□□□□ 0.04
NBPF3-213ENST00000619554 MADDQ8WXG6 1647 aa15.32■□□□□ 0.04
NBPF3-213ENST00000619554 VWDEQ8N2E2 1590 aa15.32■□□□□ 0.04
NBPF3-213ENST00000619554 ARHGAP31Q2M1Z3 1444 aa15.31■□□□□ 0.04
NBPF3-213ENST00000619554 PTPRMP28827 1452 aa15.31■□□□□ 0.04
NBPF3-213ENST00000619554 FBXO31Q5XUX0 539 aaPredicted RBP15.31■□□□□ 0.04
NBPF3-213ENST00000619554 PZPP20742 1482 aa15.29■□□□□ 0.04
NBPF3-213ENST00000619554 NPATQ14207 1427 aa15.29■□□□□ 0.04
NBPF3-213ENST00000619554 ZC3H13Q5T200 1668 aaKnown RBP15.29■□□□□ 0.04
NBPF3-213ENST00000619554 FOXD1Q16676 465 aa15.29■□□□□ 0.04
NBPF3-213ENST00000619554 FER1L4A9Z1Z3 1794 aa15.29■□□□□ 0.04
NBPF3-213ENST00000619554 CLTCQ00610 1675 aaKnown RBP15.28■□□□□ 0.04
NBPF3-213ENST00000619554 IQGAP3Q86VI3 1631 aa15.28■□□□□ 0.04
NBPF3-213ENST00000619554 RPRD2Q5VT52 1461 aaKnown RBP15.28■□□□□ 0.04
NBPF3-213ENST00000619554 AEBP2Q6ZN18 517 aaPredicted RBP15.27■□□□□ 0.04
NBPF3-213ENST00000619554 RIMS1Q86UR5 1692 aaKnown RBP15.27■□□□□ 0.03
NBPF3-213ENST00000619554 NEUROD1Q13562 356 aa15.27■□□□□ 0.03
NBPF3-213ENST00000619554 EFCAB6Q5THR3 1501 aa15.26■□□□□ 0.03
NBPF3-213ENST00000619554 TNRQ92752 1358 aa15.26■□□□□ 0.03
NBPF3-213ENST00000619554 SLC52A1Q9NWF4 448 aa15.25■□□□□ 0.03
NBPF3-213ENST00000619554 TET3O43151 1660 aa15.25■□□□□ 0.03
NBPF3-213ENST00000619554 CAMSAP1Q5T5Y3 1602 aa15.24■□□□□ 0.03
NBPF3-213ENST00000619554 ZNF316A6NFI3 1004 aaPredicted RBP15.24■□□□□ 0.03
NBPF3-213ENST00000619554 STAG3Q9UJ98 1225 aa15.24■□□□□ 0.03
NBPF3-213ENST00000619554 MROH2AA6NES4 1674 aa15.24■□□□□ 0.03
NBPF3-213ENST00000619554 CEP152O94986 1710 aa15.23■□□□□ 0.03
NBPF3-213ENST00000619554 ERVK-7P63135 1459 aa15.23■□□□□ 0.03
NBPF3-213ENST00000619554 DHX57Q6P158 1386 aaKnown RBP15.21■□□□□ 0.03
NBPF3-213ENST00000619554 CHGAP10645 457 aaKnown RBP15.21■□□□□ 0.03
NBPF3-213ENST00000619554 NOS1P29475 1434 aa15.21■□□□□ 0.03
NBPF3-213ENST00000619554 PTPRTO14522 1441 aa15.2■□□□□ 0.02
NBPF3-213ENST00000619554 IDI1Q13907 227 aa15.2■□□□□ 0.02
NBPF3-213ENST00000619554 CCDC144AA2RUR9 1427 aa15.19■□□□□ 0.02
NBPF3-213ENST00000619554 C3P01024 1663 aa15.19■□□□□ 0.02
NBPF3-213ENST00000619554 UHRF1BP1Q6BDS2 1440 aa15.18■□□□□ 0.02
NBPF3-213ENST00000619554 SPATA31D1Q6ZQQ2 1576 aa15.17■□□□□ 0.02
NBPF3-213ENST00000619554 ANKRD30BQ9BXX2 1392 aa15.17■□□□□ 0.02
NBPF3-213ENST00000619554 NLRP1Q9C000 1473 aa15.17■□□□□ 0.02
NBPF3-213ENST00000619554 E9PCH4 1651 aa15.17■□□□□ 0.02
NBPF3-213ENST00000619554 THEMISQ8N1K5 641 aaPredicted RBP15.16■□□□□ 0.02
NBPF3-213ENST00000619554 PLA2R1Q13018 1463 aa15.15■□□□□ 0.02
NBPF3-213ENST00000619554 ZNF326Q5BKZ1 582 aaKnown RBP15.15■□□□□ 0.02
NBPF3-213ENST00000619554 GTF3C3Q9Y5Q9 886 aa15.14■□□□□ 0.01
NBPF3-213ENST00000619554 TRPM2O94759 1503 aa15.13■□□□□ 0.01
NBPF3-213ENST00000619554 PREX1Q8TCU6 1659 aa15.13■□□□□ 0.01
NBPF3-213ENST00000619554 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
NBPF3-213ENST00000619554 HDGFP51858 240 aaKnown RBP15.13■□□□□ 0.01
NBPF3-213ENST00000619554 A2ML1A8K2U0 1454 aa15.12■□□□□ 0.01
NBPF3-213ENST00000619554 RGL3Q3MIN7 710 aa15.11■□□□□ 0.01
NBPF3-213ENST00000619554 SETD1BQ9UPS6 1966 aaKnown RBP15.11■□□□□ 0.01
NBPF3-213ENST00000619554 CFAP65Q6ZU64 1925 aaKnown RBP15.11■□□□□ 0.01
NBPF3-213ENST00000619554 SYNMO15061 1565 aa15.11■□□□□ 0.01
NBPF3-213ENST00000619554 MYT1Q01538 1121 aa15.1■□□□□ 0.01
NBPF3-213ENST00000619554 SIN3AQ96ST3 1273 aa15.1■□□□□ 0.01
NBPF3-213ENST00000619554 EID1Q9Y6B2 187 aa15.1■□□□□ 0.01
NBPF3-213ENST00000619554 UGGT1Q9NYU2 1555 aa15.09■□□□□ 0.01
NBPF3-213ENST00000619554 SPHKAPQ2M3C7 1700 aa15.08■□□□□ 0.01
NBPF3-213ENST00000619554 PPP1R15AO75807 674 aaPredicted RBP15.08■□□□□ 0
NBPF3-213ENST00000619554 ANKLE2Q86XL3 938 aa15.08■□□□□ 0
NBPF3-213ENST00000619554 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.08■□□□□ 0
NBPF3-213ENST00000619554 RPGRIP1LQ68CZ1 1315 aa15.07■□□□□ 0
NBPF3-213ENST00000619554 HSPA2P54652 639 aa15.07■□□□□ 0
NBPF3-213ENST00000619554 CEP170BQ9Y4F5 1589 aaPredicted RBP15.07■□□□□ 0
NBPF3-213ENST00000619554 MYO3AQ8NEV4 1616 aa15.06■□□□□ 0
NBPF3-213ENST00000619554 TXNDC2Q86VQ3 553 aa15.06■□□□□ 0
NBPF3-213ENST00000619554 TMEM2Q9UHN6 1383 aa15.06■□□□□ 0
NBPF3-213ENST00000619554 LMTK3Q96Q04 1460 aa15.05■□□□□ -0
NBPF3-213ENST00000619554 BCANQ96GW7 911 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms